RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
IRF3-219ENST00000597636 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
IRF3-219ENST00000597636 MYOM2P54296 1465 aa19.48■□□□□ 0.71
IRF3-219ENST00000597636 SKOR2Q2VWA4 1001 aaPredicted RBP19.48■□□□□ 0.71
IRF3-219ENST00000597636 GBP4Q96PP9 640 aa19.48■□□□□ 0.71
IRF3-219ENST00000597636 TRIM27P14373 513 aa19.47■□□□□ 0.71
IRF3-219ENST00000597636 GLI2P10070 1586 aa19.47■□□□□ 0.71
IRF3-219ENST00000597636 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
IRF3-219ENST00000597636 SMC4Q9NTJ3 1288 aa19.47■□□□□ 0.71
IRF3-219ENST00000597636 NEURL4Q96JN8 1562 aa19.47■□□□□ 0.71
IRF3-219ENST00000597636 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
IRF3-219ENST00000597636 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
IRF3-219ENST00000597636 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
IRF3-219ENST00000597636 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
IRF3-219ENST00000597636 KIF13AQ9H1H9 1805 aa19.45■□□□□ 0.7
IRF3-219ENST00000597636 PTMSP20962 102 aa19.45■□□□□ 0.7
IRF3-219ENST00000597636 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
IRF3-219ENST00000597636 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
IRF3-219ENST00000597636 ATF7IPQ6VMQ6 1270 aa19.44■□□□□ 0.7
IRF3-219ENST00000597636 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
IRF3-219ENST00000597636 TET3O43151 1660 aa19.44■□□□□ 0.7
IRF3-219ENST00000597636 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
IRF3-219ENST00000597636 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
IRF3-219ENST00000597636 TPM2P07951 284 aa19.43■□□□□ 0.7
IRF3-219ENST00000597636 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
IRF3-219ENST00000597636 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
IRF3-219ENST00000597636 EXOSC9Q06265 439 aaKnown RBP19.43■□□□□ 0.7
IRF3-219ENST00000597636 SSH1Q8WYL5 1049 aa19.43■□□□□ 0.7
IRF3-219ENST00000597636 DIP2CQ9Y2E4 1556 aa19.43■□□□□ 0.7
IRF3-219ENST00000597636 NUCB1Q02818 461 aa19.42■□□□□ 0.7
IRF3-219ENST00000597636 ZBTB40Q9NUA8 1239 aa19.42■□□□□ 0.7
IRF3-219ENST00000597636 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
IRF3-219ENST00000597636 NPATQ14207 1427 aa19.4■□□□□ 0.7
IRF3-219ENST00000597636 NOB1Q9ULX3 412 aaKnown RBP19.39■□□□□ 0.7
IRF3-219ENST00000597636 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.69
IRF3-219ENST00000597636 KIF2CQ99661 725 aa19.39■□□□□ 0.69
IRF3-219ENST00000597636 CCDC173Q0VFZ6 552 aa19.38■□□□□ 0.69
IRF3-219ENST00000597636 PPP1R9BQ96SB3 815 aa19.38■□□□□ 0.69
IRF3-219ENST00000597636 ADGRB2O60241 1585 aa19.38■□□□□ 0.69
IRF3-219ENST00000597636 LNPKQ9C0E8 428 aa19.38■□□□□ 0.69
IRF3-219ENST00000597636 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
IRF3-219ENST00000597636 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
IRF3-219ENST00000597636 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
IRF3-219ENST00000597636 BMP2KLQ5H9B9 411 aa19.37■□□□□ 0.69
IRF3-219ENST00000597636 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
IRF3-219ENST00000597636 USP32Q8NFA0 1604 aa19.36■□□□□ 0.69
IRF3-219ENST00000597636 IDI1Q13907 227 aa19.36■□□□□ 0.69
IRF3-219ENST00000597636 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
IRF3-219ENST00000597636 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
IRF3-219ENST00000597636 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
IRF3-219ENST00000597636 NOS1P29475 1434 aa19.35■□□□□ 0.69
IRF3-219ENST00000597636 TMPOP42166 694 aaKnown RBP19.34■□□□□ 0.69
IRF3-219ENST00000597636 NASPP49321 788 aaPredicted RBP19.34■□□□□ 0.69
IRF3-219ENST00000597636 ZSCAN30Q86W11 494 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 IPO8O15397 1037 aaKnown RBP19.34■□□□□ 0.69
IRF3-219ENST00000597636 KIAA1211Q6ZU35 1233 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
IRF3-219ENST00000597636 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
IRF3-219ENST00000597636 GOLGA6L22H0YM25 854 aa19.33■□□□□ 0.69
IRF3-219ENST00000597636 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.69
IRF3-219ENST00000597636 ABCC11Q96J66 1382 aa19.33■□□□□ 0.68
IRF3-219ENST00000597636 IL16Q14005 1332 aa19.33■□□□□ 0.68
IRF3-219ENST00000597636 KIF16BQ96L93 1317 aa19.33■□□□□ 0.68
IRF3-219ENST00000597636 SETBP1Q9Y6X0 1596 aa19.33■□□□□ 0.68
IRF3-219ENST00000597636 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
IRF3-219ENST00000597636 NSD2O96028 1365 aa19.32■□□□□ 0.68
IRF3-219ENST00000597636 SSFA2P28290 1259 aa19.32■□□□□ 0.68
IRF3-219ENST00000597636 ANP32BQ92688 251 aaKnown RBP19.32■□□□□ 0.68
IRF3-219ENST00000597636 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
IRF3-219ENST00000597636 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
IRF3-219ENST00000597636 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
IRF3-219ENST00000597636 KLHL40Q2TBA0 621 aa19.31■□□□□ 0.68
IRF3-219ENST00000597636 OFD1O75665 1012 aa19.31■□□□□ 0.68
IRF3-219ENST00000597636 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
IRF3-219ENST00000597636 ABCC3O15438 1527 aa19.31■□□□□ 0.68
IRF3-219ENST00000597636 KIF1BO60333 1816 aa19.3■□□□□ 0.68
IRF3-219ENST00000597636 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
IRF3-219ENST00000597636 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
IRF3-219ENST00000597636 C14orf93Q9H972 538 aaKnown RBP19.3■□□□□ 0.68
IRF3-219ENST00000597636 DDX49Q9Y6V7 483 aaKnown RBP19.3■□□□□ 0.68
IRF3-219ENST00000597636 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
IRF3-219ENST00000597636 RBM42Q9BTD8 480 aaKnown RBP19.29■□□□□ 0.68
IRF3-219ENST00000597636 BAG4O95429 457 aaKnown RBP19.28■□□□□ 0.68
IRF3-219ENST00000597636 TBC1D9Q6ZT07 1266 aa19.28■□□□□ 0.68
IRF3-219ENST00000597636 SIGLEC1Q9BZZ2 1709 aa19.28■□□□□ 0.68
IRF3-219ENST00000597636 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
IRF3-219ENST00000597636 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
IRF3-219ENST00000597636 ZC3H13Q5T200 1668 aaKnown RBP19.28■□□□□ 0.68
IRF3-219ENST00000597636 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
IRF3-219ENST00000597636 ALDH1L2Q3SY69 923 aa19.27■□□□□ 0.68
IRF3-219ENST00000597636 PUS7Q96PZ0 661 aaKnown RBP19.27■□□□□ 0.68
IRF3-219ENST00000597636 MSNP26038 577 aaKnown RBP19.27■□□□□ 0.68
IRF3-219ENST00000597636 GCC1Q96CN9 775 aa19.27■□□□□ 0.68
IRF3-219ENST00000597636 TERF1P54274 439 aa19.26■□□□□ 0.67
IRF3-219ENST00000597636 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.26■□□□□ 0.67
IRF3-219ENST00000597636 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
IRF3-219ENST00000597636 ZNF445P59923 1031 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms