RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.09
ARHGEF1-213ENST00000595897 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.08
ARHGEF1-213ENST00000595897 RPGRIP1LQ68CZ1 1315 aa21.82■■□□□ 1.08
ARHGEF1-213ENST00000595897 KIF16BQ96L93 1317 aa21.82■■□□□ 1.08
ARHGEF1-213ENST00000595897 ADGRB1O14514 1584 aa21.82■■□□□ 1.08
ARHGEF1-213ENST00000595897 HSP90AB1P08238 724 aaKnown RBP21.82■■□□□ 1.08
ARHGEF1-213ENST00000595897 PUS7Q96PZ0 661 aaKnown RBP21.82■■□□□ 1.08
ARHGEF1-213ENST00000595897 NAP1L5Q96NT1 182 aaPredicted RBP21.81■■□□□ 1.08
ARHGEF1-213ENST00000595897 HSP90AA1P07900 732 aaKnown RBP21.81■■□□□ 1.08
ARHGEF1-213ENST00000595897 NPATQ14207 1427 aa21.81■■□□□ 1.08
ARHGEF1-213ENST00000595897 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
ARHGEF1-213ENST00000595897 STK26Q9P289 416 aa21.8■■□□□ 1.08
ARHGEF1-213ENST00000595897 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
ARHGEF1-213ENST00000595897 NUCB1Q02818 461 aa21.8■■□□□ 1.08
ARHGEF1-213ENST00000595897 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
ARHGEF1-213ENST00000595897 ABCA9Q8IUA7 1624 aa21.79■■□□□ 1.08
ARHGEF1-213ENST00000595897 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
ARHGEF1-213ENST00000595897 GRPEL1Q9HAV7 217 aa21.79■■□□□ 1.08
ARHGEF1-213ENST00000595897 RBM25P49756 843 aaKnown RBP21.78■■□□□ 1.08
ARHGEF1-213ENST00000595897 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
ARHGEF1-213ENST00000595897 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
ARHGEF1-213ENST00000595897 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF1-213ENST00000595897 IL16Q14005 1332 aa21.78■■□□□ 1.08
ARHGEF1-213ENST00000595897 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
ARHGEF1-213ENST00000595897 A0A1W2PP64 1363 aa21.77■■□□□ 1.08
ARHGEF1-213ENST00000595897 LMTK2Q8IWU2 1503 aa21.76■■□□□ 1.07
ARHGEF1-213ENST00000595897 CLCN1P35523 988 aa21.76■■□□□ 1.07
ARHGEF1-213ENST00000595897 TNPO1Q92973 898 aaKnown RBP21.76■■□□□ 1.07
ARHGEF1-213ENST00000595897 SNX21Q969T3 373 aa21.76■■□□□ 1.07
ARHGEF1-213ENST00000595897 GBP4Q96PP9 640 aa21.76■■□□□ 1.07
ARHGEF1-213ENST00000595897 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
ARHGEF1-213ENST00000595897 ZC3H13Q5T200 1668 aaKnown RBP21.75■■□□□ 1.07
ARHGEF1-213ENST00000595897 ANKRD45Q5TZF3 282 aa21.75■■□□□ 1.07
ARHGEF1-213ENST00000595897 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
ARHGEF1-213ENST00000595897 FOXD4L1Q9NU39 408 aa21.74■■□□□ 1.07
ARHGEF1-213ENST00000595897 TERF2IPQ9NYB0 399 aa21.74■■□□□ 1.07
ARHGEF1-213ENST00000595897 FYB1O15117 783 aa21.73■■□□□ 1.07
ARHGEF1-213ENST00000595897 ALDH1L2Q3SY69 923 aa21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 ISY1Q9ULR0 285 aaKnown RBP21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 CIZ1Q9ULV3 898 aaPredicted RBP21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 DDIT3P35638 169 aa21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 TRIM44Q96DX7 344 aaPredicted RBP21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 PPLO60437 1756 aa21.72■■□□□ 1.07
ARHGEF1-213ENST00000595897 GLI2P10070 1586 aa21.71■■□□□ 1.07
ARHGEF1-213ENST00000595897 NCOA3Q9Y6Q9 1424 aa21.7■■□□□ 1.06
ARHGEF1-213ENST00000595897 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
ARHGEF1-213ENST00000595897 C1orf115Q9H7X2 142 aa21.7■■□□□ 1.06
ARHGEF1-213ENST00000595897 MINK1Q8N4C8 1332 aaPredicted RBP21.7■■□□□ 1.06
ARHGEF1-213ENST00000595897 RAB3GAP1Q15042 981 aa21.68■■□□□ 1.06
ARHGEF1-213ENST00000595897 ESPNB1AK53 854 aa21.68■■□□□ 1.06
ARHGEF1-213ENST00000595897 SKOR2Q2VWA4 1001 aaPredicted RBP21.68■■□□□ 1.06
ARHGEF1-213ENST00000595897 GCC1Q96CN9 775 aa21.68■■□□□ 1.06
ARHGEF1-213ENST00000595897 CHMP4BQ9H444 224 aaKnown RBP21.68■■□□□ 1.06
ARHGEF1-213ENST00000595897 ASXL2Q76L83 1435 aa21.67■■□□□ 1.06
ARHGEF1-213ENST00000595897 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
ARHGEF1-213ENST00000595897 FCHSD2O94868 740 aa21.66■■□□□ 1.06
ARHGEF1-213ENST00000595897 HDGFL2Q7Z4V5 671 aaPredicted RBP21.66■■□□□ 1.06
ARHGEF1-213ENST00000595897 TBC1D9Q6ZT07 1266 aa21.66■■□□□ 1.06
ARHGEF1-213ENST00000595897 K7ELQ4 463 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 ZBTB7BO15156 539 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 GAS2L3Q86XJ1 694 aa21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 KIF2CQ99661 725 aa21.65■■□□□ 1.06
ARHGEF1-213ENST00000595897 PTMSP20962 102 aa21.64■■□□□ 1.06
ARHGEF1-213ENST00000595897 ZNF428Q96B54 188 aa21.64■■□□□ 1.06
ARHGEF1-213ENST00000595897 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.06
ARHGEF1-213ENST00000595897 GOLGA6L22H0YM25 854 aa21.64■■□□□ 1.05
ARHGEF1-213ENST00000595897 THUMPD2Q9BTF0 503 aaKnown RBP21.63■■□□□ 1.05
ARHGEF1-213ENST00000595897 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
ARHGEF1-213ENST00000595897 IDI1Q13907 227 aa21.62■■□□□ 1.05
ARHGEF1-213ENST00000595897 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
ARHGEF1-213ENST00000595897 HMOX1P09601 288 aa21.61■■□□□ 1.05
ARHGEF1-213ENST00000595897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
ARHGEF1-213ENST00000595897 FBLN1P23142 703 aa21.6■■□□□ 1.05
ARHGEF1-213ENST00000595897 VAMP4O75379 141 aa21.6■■□□□ 1.05
ARHGEF1-213ENST00000595897 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
ARHGEF1-213ENST00000595897 ERBB4Q15303 1308 aa21.6■■□□□ 1.05
ARHGEF1-213ENST00000595897 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
ARHGEF1-213ENST00000595897 NPM1P06748 294 aaKnown RBP eCLIP21.59■■□□□ 1.05
ARHGEF1-213ENST00000595897 SSFA2P28290 1259 aa21.59■■□□□ 1.05
ARHGEF1-213ENST00000595897 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF1-213ENST00000595897 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
ARHGEF1-213ENST00000595897 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
ARHGEF1-213ENST00000595897 CDC45O75419 566 aa21.58■■□□□ 1.05
ARHGEF1-213ENST00000595897 GAS2L2Q8NHY3 880 aa21.58■■□□□ 1.05
ARHGEF1-213ENST00000595897 ARHGAP45Q92619 1136 aa21.58■■□□□ 1.05
ARHGEF1-213ENST00000595897 ABCC3O15438 1527 aa21.58■■□□□ 1.05
ARHGEF1-213ENST00000595897 PNPLA6Q8IY17 1366 aa21.58■■□□□ 1.04
ARHGEF1-213ENST00000595897 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 CAMSAP1Q5T5Y3 1602 aa21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 ANP32BQ92688 251 aaKnown RBP21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 GLIPR1L2Q4G1C9 344 aa21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 SIRT2Q8IXJ6 389 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms