RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 MYOM1P52179 1685 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 SLIT2O94813 1529 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 FMN1Q68DA7 1419 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 APBA3O96018 575 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 APLP1P51693 650 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 VPS72Q15906 364 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 GPR162Q16538 588 aa8.4□□□□□ -1.06
ERCC1-216ENST00000592444 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.06
ERCC1-216ENST00000592444 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.07
ERCC1-216ENST00000592444 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
ERCC1-216ENST00000592444 SNPHO15079 494 aa8.39□□□□□ -1.07
ERCC1-216ENST00000592444 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
ERCC1-216ENST00000592444 NUP188Q5SRE5 1749 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 LRRIQ1Q96JM4 1722 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 TRIM37O94972 964 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 PYGBP11216 843 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 PTGER2P43116 358 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 IDI1Q13907 227 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 KLHL34Q8N239 644 aa8.38□□□□□ -1.07
ERCC1-216ENST00000592444 RREB1Q92766 1687 aa8.37□□□□□ -1.07
ERCC1-216ENST00000592444 ZNF644Q9H582 1327 aaPredicted RBP8.37□□□□□ -1.07
ERCC1-216ENST00000592444 FAM98CQ17RN3 349 aaKnown RBP8.37□□□□□ -1.07
ERCC1-216ENST00000592444 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
ERCC1-216ENST00000592444 PLEKHG1Q9ULL1 1385 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 ADGRB2O60241 1585 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 DLC1Q96QB1 1528 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
ERCC1-216ENST00000592444 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 TMEM121BQ9BXQ6 578 aaPredicted RBP8.36□□□□□ -1.07
ERCC1-216ENST00000592444 PDGFDQ9GZP0 370 aaPredicted RBP8.36□□□□□ -1.07
ERCC1-216ENST00000592444 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
ERCC1-216ENST00000592444 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 ATP10DQ9P241 1426 aa8.36□□□□□ -1.07
ERCC1-216ENST00000592444 CEP152O94986 1710 aa8.35□□□□□ -1.07
ERCC1-216ENST00000592444 MBD5Q9P267 1494 aa8.35□□□□□ -1.07
ERCC1-216ENST00000592444 TNS2Q63HR2 1409 aa8.35□□□□□ -1.07
ERCC1-216ENST00000592444 LAMC1P11047 1609 aa8.34□□□□□ -1.07
ERCC1-216ENST00000592444 GSE1Q14687 1217 aa8.34□□□□□ -1.07
ERCC1-216ENST00000592444 JMYQ8N9B5 988 aa8.34□□□□□ -1.07
ERCC1-216ENST00000592444 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
ERCC1-216ENST00000592444 AATKQ6ZMQ8 1374 aa8.34□□□□□ -1.07
ERCC1-216ENST00000592444 ADGRB3O60242 1522 aa8.34□□□□□ -1.08
ERCC1-216ENST00000592444 C1orf167Q5SNV9 1468 aa8.33□□□□□ -1.08
ERCC1-216ENST00000592444 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
ERCC1-216ENST00000592444 ADGRL3Q9HAR2 1447 aa8.33□□□□□ -1.08
ERCC1-216ENST00000592444 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
ERCC1-216ENST00000592444 PCDHB8Q9UN66 801 aa8.32□□□□□ -1.08
ERCC1-216ENST00000592444 TRPM2O94759 1503 aa8.32□□□□□ -1.08
ERCC1-216ENST00000592444 CASZ1Q86V15 1759 aa8.32□□□□□ -1.08
ERCC1-216ENST00000592444 ARHGAP31Q2M1Z3 1444 aa8.31□□□□□ -1.08
ERCC1-216ENST00000592444 PTPRUQ92729 1446 aa8.31□□□□□ -1.08
ERCC1-216ENST00000592444 PIK3R4Q99570 1358 aa8.31□□□□□ -1.08
ERCC1-216ENST00000592444 RPRD2Q5VT52 1461 aaKnown RBP8.31□□□□□ -1.08
ERCC1-216ENST00000592444 ADAMTS13Q76LX8 1427 aa8.3□□□□□ -1.08
ERCC1-216ENST00000592444 TMEM131LA2VDJ0 1609 aa8.3□□□□□ -1.08
ERCC1-216ENST00000592444 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
ERCC1-216ENST00000592444 MTUS2Q5JR59 1369 aa8.3□□□□□ -1.08
ERCC1-216ENST00000592444 CCNB3Q8WWL7 1395 aa8.3□□□□□ -1.08
ERCC1-216ENST00000592444 ZFYVE9O95405 1425 aa8.29□□□□□ -1.08
ERCC1-216ENST00000592444 NOS1P29475 1434 aa8.29□□□□□ -1.08
ERCC1-216ENST00000592444 HTRA3P83110 453 aa8.29□□□□□ -1.08
ERCC1-216ENST00000592444 GOLGA2Q08379 1002 aa8.29□□□□□ -1.08
ERCC1-216ENST00000592444 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
ERCC1-216ENST00000592444 RIMS2Q9UQ26 1411 aa8.29□□□□□ -1.08
ERCC1-216ENST00000592444 CCDC18Q5T9S5 1454 aa8.28□□□□□ -1.08
ERCC1-216ENST00000592444 CHRM1P11229 460 aaPredicted RBP8.28□□□□□ -1.08
ERCC1-216ENST00000592444 HDGFP51858 240 aaKnown RBP8.28□□□□□ -1.08
ERCC1-216ENST00000592444 XPCQ01831 940 aaPredicted RBP8.28□□□□□ -1.08
ERCC1-216ENST00000592444 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
ERCC1-216ENST00000592444 ZNF467Q7Z7K2 595 aaPredicted RBP8.28□□□□□ -1.08
ERCC1-216ENST00000592444 EHBP1L1Q8N3D4 1523 aa8.28□□□□□ -1.08
ERCC1-216ENST00000592444 KIF3CO14782 793 aa8.27□□□□□ -1.09
ERCC1-216ENST00000592444 C3orf67Q6ZVT6 689 aa8.27□□□□□ -1.09
ERCC1-216ENST00000592444 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
ERCC1-216ENST00000592444 ARXQ96QS3 562 aa8.27□□□□□ -1.09
ERCC1-216ENST00000592444 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
ERCC1-216ENST00000592444 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
ERCC1-216ENST00000592444 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
ERCC1-216ENST00000592444 PLCH1Q4KWH8 1693 aa8.26□□□□□ -1.09
ERCC1-216ENST00000592444 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
ERCC1-216ENST00000592444 USP32Q8NFA0 1604 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 IFNLR1Q8IU57 520 aaPredicted RBP8.25□□□□□ -1.09
ERCC1-216ENST00000592444 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 MARVELD3Q96A59 401 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
ERCC1-216ENST00000592444 WDR90Q96KV7 1748 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 NWD2Q9ULI1 1742 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 NPHP3Q7Z494 1330 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 PXDNQ92626 1479 aa8.25□□□□□ -1.09
ERCC1-216ENST00000592444 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
ERCC1-216ENST00000592444 MLLT1Q03111 559 aaPredicted RBP8.24□□□□□ -1.09
ERCC1-216ENST00000592444 MKRN3Q13064 507 aaKnown RBP8.24□□□□□ -1.09
ERCC1-216ENST00000592444 MTFR1LQ9H019 292 aa8.24□□□□□ -1.09
ERCC1-216ENST00000592444 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
ERCC1-216ENST00000592444 GRIN3BO60391 1043 aa8.23□□□□□ -1.09
ERCC1-216ENST00000592444 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.23□□□□□ -1.09
ERCC1-216ENST00000592444 SLC52A1Q9NWF4 448 aa8.23□□□□□ -1.09
ERCC1-216ENST00000592444 PTPN23Q9H3S7 1636 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms