RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 FOXO3O43524 673 aa20.67■□□□□ 0.9
DDX39A-211ENST00000590239 TOM1O60784 492 aa20.67■□□□□ 0.9
DDX39A-211ENST00000590239 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-211ENST00000590239 RALBP1Q15311 655 aa20.66■□□□□ 0.9
DDX39A-211ENST00000590239 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
DDX39A-211ENST00000590239 FYB1O15117 783 aa20.65■□□□□ 0.9
DDX39A-211ENST00000590239 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
DDX39A-211ENST00000590239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDX39A-211ENST00000590239 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
DDX39A-211ENST00000590239 KRT28Q7Z3Y7 464 aa20.64■□□□□ 0.89
DDX39A-211ENST00000590239 KIF20BQ96Q89 1820 aa20.62■□□□□ 0.89
DDX39A-211ENST00000590239 MIER1Q8N108 512 aa20.62■□□□□ 0.89
DDX39A-211ENST00000590239 SBNO1A3KN83 1393 aa20.61■□□□□ 0.89
DDX39A-211ENST00000590239 NME9Q86XW9 330 aa20.61■□□□□ 0.89
DDX39A-211ENST00000590239 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
DDX39A-211ENST00000590239 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-211ENST00000590239 MORC1Q86VD1 984 aa20.6■□□□□ 0.89
DDX39A-211ENST00000590239 GGNBP2Q9H3C7 697 aa20.6■□□□□ 0.89
DDX39A-211ENST00000590239 PXDNQ92626 1479 aa20.6■□□□□ 0.89
DDX39A-211ENST00000590239 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
DDX39A-211ENST00000590239 TRPM3Q9HCF6 1732 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-211ENST00000590239 ANKRD26Q9UPS8 1709 aa20.59■□□□□ 0.89
DDX39A-211ENST00000590239 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-211ENST00000590239 SOS2Q07890 1332 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-211ENST00000590239 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
DDX39A-211ENST00000590239 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.89
DDX39A-211ENST00000590239 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-211ENST00000590239 COG3Q96JB2 828 aa20.58■□□□□ 0.89
DDX39A-211ENST00000590239 MED1Q15648 1581 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-211ENST00000590239 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
DDX39A-211ENST00000590239 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
DDX39A-211ENST00000590239 PIK3C2AO00443 1686 aa20.57■□□□□ 0.88
DDX39A-211ENST00000590239 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
DDX39A-211ENST00000590239 OVOS2A0A0J9YW53 1432 aa20.56■□□□□ 0.88
DDX39A-211ENST00000590239 OVOS2Q6IE36 1432 aa20.56■□□□□ 0.88
DDX39A-211ENST00000590239 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
DDX39A-211ENST00000590239 ZRANB1Q9UGI0 708 aa20.55■□□□□ 0.88
DDX39A-211ENST00000590239 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-211ENST00000590239 USP54Q70EL1 1684 aa20.54■□□□□ 0.88
DDX39A-211ENST00000590239 CCER2I3L3R5 266 aa20.54■□□□□ 0.88
DDX39A-211ENST00000590239 NLRP6P59044 892 aa20.54■□□□□ 0.88
DDX39A-211ENST00000590239 SPATA31A3Q5VYP0 1347 aa20.53■□□□□ 0.88
DDX39A-211ENST00000590239 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
DDX39A-211ENST00000590239 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
DDX39A-211ENST00000590239 ALS2Q96Q42 1657 aa20.53■□□□□ 0.88
DDX39A-211ENST00000590239 ARHGEF10O15013 1369 aa20.52■□□□□ 0.88
DDX39A-211ENST00000590239 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
DDX39A-211ENST00000590239 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
DDX39A-211ENST00000590239 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
DDX39A-211ENST00000590239 USP19O94966 1318 aa20.49■□□□□ 0.87
DDX39A-211ENST00000590239 MARF1Q9Y4F3 1742 aaKnown RBP20.48■□□□□ 0.87
DDX39A-211ENST00000590239 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-211ENST00000590239 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
DDX39A-211ENST00000590239 LMOD2Q6P5Q4 547 aa20.48■□□□□ 0.87
DDX39A-211ENST00000590239 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
DDX39A-211ENST00000590239 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
DDX39A-211ENST00000590239 SLIT3O75094 1523 aa20.45■□□□□ 0.86
DDX39A-211ENST00000590239 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
DDX39A-211ENST00000590239 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-211ENST00000590239 MTHFSP49914 203 aa20.43■□□□□ 0.86
DDX39A-211ENST00000590239 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
DDX39A-211ENST00000590239 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
DDX39A-211ENST00000590239 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
DDX39A-211ENST00000590239 GCP02774 474 aa20.41■□□□□ 0.86
DDX39A-211ENST00000590239 NFAT5O94916 1531 aa20.41■□□□□ 0.86
DDX39A-211ENST00000590239 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
DDX39A-211ENST00000590239 CFAP53Q96M91 514 aa20.4■□□□□ 0.86
DDX39A-211ENST00000590239 INSRP06213 1382 aa20.39■□□□□ 0.85
DDX39A-211ENST00000590239 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
DDX39A-211ENST00000590239 FBLN1P23142 703 aa20.39■□□□□ 0.85
DDX39A-211ENST00000590239 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.85
DDX39A-211ENST00000590239 PNPLA6Q8IY17 1366 aa20.38■□□□□ 0.85
DDX39A-211ENST00000590239 SOX12O15370 315 aa20.38■□□□□ 0.85
DDX39A-211ENST00000590239 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
DDX39A-211ENST00000590239 MAP2P11137 1827 aaKnown RBP20.38■□□□□ 0.85
DDX39A-211ENST00000590239 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
DDX39A-211ENST00000590239 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-211ENST00000590239 MAP3K19Q56UN5 1328 aa20.37■□□□□ 0.85
DDX39A-211ENST00000590239 EMILIN1Q9Y6C2 1016 aa20.37■□□□□ 0.85
DDX39A-211ENST00000590239 COL22A1Q8NFW1 1626 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-211ENST00000590239 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-211ENST00000590239 HSPA1LP34931 641 aa20.35■□□□□ 0.85
DDX39A-211ENST00000590239 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
DDX39A-211ENST00000590239 CABLES1Q8TDN4 633 aa20.35■□□□□ 0.85
DDX39A-211ENST00000590239 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
DDX39A-211ENST00000590239 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
DDX39A-211ENST00000590239 CPDO75976 1380 aa20.34■□□□□ 0.85
DDX39A-211ENST00000590239 FLT4P35916 1363 aa20.34■□□□□ 0.85
DDX39A-211ENST00000590239 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-211ENST00000590239 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
DDX39A-211ENST00000590239 AMPHP49418 695 aa20.33■□□□□ 0.85
DDX39A-211ENST00000590239 ABCA3Q99758 1704 aa20.33■□□□□ 0.84
DDX39A-211ENST00000590239 PEAK1Q9H792 1746 aa20.32■□□□□ 0.84
DDX39A-211ENST00000590239 JCADQ9P266 1359 aa20.32■□□□□ 0.84
DDX39A-211ENST00000590239 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-211ENST00000590239 IP6K1Q92551 441 aa20.31■□□□□ 0.84
DDX39A-211ENST00000590239 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
DDX39A-211ENST00000590239 LTN1O94822 1766 aa20.31■□□□□ 0.84
DDX39A-211ENST00000590239 HOXC9P31274 260 aa20.3■□□□□ 0.84
DDX39A-211ENST00000590239 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms