RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SBNO1A3KN83 1393 aa31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 KTN1Q86UP2 1357 aaKnown RBP31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 JCADQ9P266 1359 aa31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 HDGFL2Q7Z4V5 671 aaPredicted RBP31.16■■■□□ 2.58
R3HDM4-205ENST00000589445 KIF7Q2M1P5 1343 aa31.16■■■□□ 2.58
R3HDM4-205ENST00000589445 CPSF1Q10570 1443 aaKnown RBP31.15■■■□□ 2.58
R3HDM4-205ENST00000589445 C11orf95C9JLR9 678 aaPredicted RBP31.15■■■□□ 2.58
R3HDM4-205ENST00000589445 LMOD2Q6P5Q4 547 aa31.15■■■□□ 2.58
R3HDM4-205ENST00000589445 LRRC59Q96AG4 307 aaKnown RBP31.15■■■□□ 2.58
R3HDM4-205ENST00000589445 PNPLA6Q8IY17 1366 aa31.15■■■□□ 2.58
R3HDM4-205ENST00000589445 PIK3C2AO00443 1686 aa31.14■■■□□ 2.58
R3HDM4-205ENST00000589445 TERF2IPQ9NYB0 399 aa31.14■■■□□ 2.58
R3HDM4-205ENST00000589445 ANKRD36BQ8N2N9 1353 aa31.13■■■□□ 2.57
R3HDM4-205ENST00000589445 SPATA31A3Q5VYP0 1347 aa31.12■■■□□ 2.57
R3HDM4-205ENST00000589445 CCDC7Q96M83 1385 aa31.12■■■□□ 2.57
R3HDM4-205ENST00000589445 KIF20BQ96Q89 1820 aa31.12■■■□□ 2.57
R3HDM4-205ENST00000589445 ARHGEF10O15013 1369 aa31.1■■■□□ 2.57
R3HDM4-205ENST00000589445 PLEKHG5O94827 1062 aa31.1■■■□□ 2.57
R3HDM4-205ENST00000589445 CRYBG1Q9Y4K1 1723 aa31.1■■■□□ 2.57
R3HDM4-205ENST00000589445 PHRF1Q9P1Y6 1649 aaKnown RBP31.09■■■□□ 2.57
R3HDM4-205ENST00000589445 EDC4Q6P2E9 1401 aaKnown RBP31.08■■■□□ 2.57
R3HDM4-205ENST00000589445 ZNF692Q9BU19 519 aaPredicted RBP31.07■■■□□ 2.56
R3HDM4-205ENST00000589445 BRD4O60885 1362 aaPredicted RBP31.06■■■□□ 2.56
R3HDM4-205ENST00000589445 WASHC2AQ641Q2 1341 aa31.06■■■□□ 2.56
R3HDM4-205ENST00000589445 SSH2Q76I76 1423 aa31.05■■■□□ 2.56
R3HDM4-205ENST00000589445 MARF1Q9Y4F3 1742 aaKnown RBP31.04■■■□□ 2.56
R3HDM4-205ENST00000589445 NSD3Q9BZ95 1437 aa31.02■■■□□ 2.56
R3HDM4-205ENST00000589445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.02■■■□□ 2.56
R3HDM4-205ENST00000589445 TTC21BQ7Z4L5 1316 aa31.01■■■□□ 2.56
R3HDM4-205ENST00000589445 NUTM2GQ5VZR2 741 aa31.01■■■□□ 2.55
R3HDM4-205ENST00000589445 LRP6O75581 1613 aa31.01■■■□□ 2.55
R3HDM4-205ENST00000589445 USP54Q70EL1 1684 aa31■■■□□ 2.55
R3HDM4-205ENST00000589445 NUTM2BA6NNL0 878 aaPredicted RBP31■■■□□ 2.55
R3HDM4-205ENST00000589445 NUTM2EB1AL46 878 aaPredicted RBP31■■■□□ 2.55
R3HDM4-205ENST00000589445 NUTM2AQ8IVF1 878 aaPredicted RBP31■■■□□ 2.55
R3HDM4-205ENST00000589445 ABTB2Q8N961 1025 aa31■■■□□ 2.55
R3HDM4-205ENST00000589445 SPATA31A6Q5VVP1 1343 aa30.99■■■□□ 2.55
R3HDM4-205ENST00000589445 TTC21AQ8NDW8 1320 aa30.99■■■□□ 2.55
R3HDM4-205ENST00000589445 HAP1P54257 671 aaPredicted RBP30.97■■■□□ 2.55
R3HDM4-205ENST00000589445 CABLES1Q8TDN4 633 aa30.95■■■□□ 2.55
R3HDM4-205ENST00000589445 ANKRD26Q9UPS8 1709 aa30.95■■■□□ 2.54
R3HDM4-205ENST00000589445 NME9Q86XW9 330 aa30.94■■■□□ 2.54
R3HDM4-205ENST00000589445 PANK3Q9H999 370 aa30.93■■■□□ 2.54
R3HDM4-205ENST00000589445 SLIT3O75094 1523 aa30.92■■■□□ 2.54
R3HDM4-205ENST00000589445 NLRP6P59044 892 aa30.91■■■□□ 2.54
R3HDM4-205ENST00000589445 MEX3CQ5U5Q3 659 aaKnown RBP30.91■■■□□ 2.54
R3HDM4-205ENST00000589445 UPF1Q92900 1129 aaKnown RBP eCLIP30.91■■■□□ 2.54
R3HDM4-205ENST00000589445 CARD14Q9BXL6 1004 aa30.9■■■□□ 2.54
R3HDM4-205ENST00000589445 NLRP13Q86W25 1043 aa30.89■■■□□ 2.54
R3HDM4-205ENST00000589445 PLCH1Q4KWH8 1693 aa30.88■■■□□ 2.53
R3HDM4-205ENST00000589445 ADAMTS2O95450 1211 aa30.88■■■□□ 2.53
R3HDM4-205ENST00000589445 USP19O94966 1318 aa30.88■■■□□ 2.53
R3HDM4-205ENST00000589445 OVOS2A0A0J9YW53 1432 aa30.88■■■□□ 2.53
R3HDM4-205ENST00000589445 OVOS2Q6IE36 1432 aa30.88■■■□□ 2.53
R3HDM4-205ENST00000589445 ZRANB1Q9UGI0 708 aa30.87■■■□□ 2.53
R3HDM4-205ENST00000589445 LTN1O94822 1766 aa30.85■■■□□ 2.53
R3HDM4-205ENST00000589445 CGNL1Q0VF96 1302 aa30.84■■■□□ 2.53
R3HDM4-205ENST00000589445 SOX12O15370 315 aa30.84■■■□□ 2.53
R3HDM4-205ENST00000589445 USP31Q70CQ4 1352 aa30.83■■■□□ 2.53
R3HDM4-205ENST00000589445 ZNF772Q68DY9 489 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-205ENST00000589445 NFAT5O94916 1531 aa30.83■■■□□ 2.53
R3HDM4-205ENST00000589445 GGNBP2Q9H3C7 697 aa30.82■■■□□ 2.52
R3HDM4-205ENST00000589445 COL14A1Q05707 1796 aaKnown RBP30.82■■■□□ 2.52
R3HDM4-205ENST00000589445 COG3Q96JB2 828 aa30.8■■■□□ 2.52
R3HDM4-205ENST00000589445 C8orf37Q96NL8 207 aa30.79■■■□□ 2.52
R3HDM4-205ENST00000589445 KNSTRNQ9Y448 316 aa30.79■■■□□ 2.52
R3HDM4-205ENST00000589445 ZBTB7CA1YPR0 619 aa30.78■■■□□ 2.52
R3HDM4-205ENST00000589445 ZNF316A6NFI3 1004 aaPredicted RBP30.78■■■□□ 2.52
R3HDM4-205ENST00000589445 FYB1O15117 783 aa30.77■■■□□ 2.52
R3HDM4-205ENST00000589445 KIAA0232Q92628 1395 aa30.77■■■□□ 2.52
R3HDM4-205ENST00000589445 NWD2Q9ULI1 1742 aa30.76■■■□□ 2.51
R3HDM4-205ENST00000589445 ZC3H6P61129 1189 aaKnown RBP30.75■■■□□ 2.51
R3HDM4-205ENST00000589445 NSD2O96028 1365 aa30.75■■■□□ 2.51
R3HDM4-205ENST00000589445 GCP02774 474 aa30.74■■■□□ 2.51
R3HDM4-205ENST00000589445 KCNH5Q8NCM2 988 aa30.73■■■□□ 2.51
R3HDM4-205ENST00000589445 PRDM11Q9NQV5 511 aa30.73■■■□□ 2.51
R3HDM4-205ENST00000589445 NRAPQ86VF7 1730 aa30.73■■■□□ 2.51
R3HDM4-205ENST00000589445 CNGB1Q14028 1251 aaPredicted RBP30.72■■■□□ 2.51
R3HDM4-205ENST00000589445 LMO7Q8WWI1 1683 aa30.71■■■□□ 2.51
R3HDM4-205ENST00000589445 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.71■■■□□ 2.51
R3HDM4-205ENST00000589445 DDX10Q13206 875 aaKnown RBP30.71■■■□□ 2.51
R3HDM4-205ENST00000589445 NGLY1Q96IV0 654 aa30.71■■■□□ 2.51
R3HDM4-205ENST00000589445 RGPD5Q99666 1765 aa30.71■■■□□ 2.51
R3HDM4-205ENST00000589445 CPDO75976 1380 aa30.69■■■□□ 2.5
R3HDM4-205ENST00000589445 RXRBP28702 533 aa30.69■■■□□ 2.5
R3HDM4-205ENST00000589445 AFF2P51816 1311 aa30.69■■■□□ 2.5
R3HDM4-205ENST00000589445 CHRNA2Q15822 529 aa30.68■■■□□ 2.5
R3HDM4-205ENST00000589445 COL18A1P39060 1754 aa30.67■■■□□ 2.5
R3HDM4-205ENST00000589445 CDK12Q9NYV4 1490 aaPredicted RBP30.66■■■□□ 2.5
R3HDM4-205ENST00000589445 CC2D1BQ5T0F9 858 aaKnown RBP30.66■■■□□ 2.5
R3HDM4-205ENST00000589445 MAP2P11137 1827 aaKnown RBP30.66■■■□□ 2.5
R3HDM4-205ENST00000589445 AMER1Q5JTC6 1135 aaPredicted RBP30.65■■■□□ 2.5
R3HDM4-205ENST00000589445 SLIT2O94813 1529 aa30.64■■■□□ 2.5
R3HDM4-205ENST00000589445 ABCC6O95255 1503 aa30.64■■■□□ 2.5
R3HDM4-205ENST00000589445 PER1O15534 1290 aaPredicted RBP30.64■■■□□ 2.5
R3HDM4-205ENST00000589445 TNNT2P45379 298 aaPredicted RBP30.64■■■□□ 2.5
R3HDM4-205ENST00000589445 FAM83GA6ND36 823 aa30.63■■■□□ 2.49
R3HDM4-205ENST00000589445 PEAK1Q9H792 1746 aa30.63■■■□□ 2.49
R3HDM4-205ENST00000589445 MORC1Q86VD1 984 aa30.62■■■□□ 2.49
R3HDM4-205ENST00000589445 CAMTA1Q9Y6Y1 1673 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms