RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
ABCA8-208ENST00000586539 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
ABCA8-208ENST00000586539 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
ABCA8-208ENST00000586539 CENPHQ9H3R5 247 aa13.44□□□□□ -0.26
ABCA8-208ENST00000586539 ENOX2Q16206 610 aaKnown RBP13.44□□□□□ -0.26
ABCA8-208ENST00000586539 APAF1O14727 1248 aa13.44□□□□□ -0.26
ABCA8-208ENST00000586539 ZSCAN30Q86W11 494 aa13.44□□□□□ -0.26
ABCA8-208ENST00000586539 NESP48681 1621 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 SASS6Q6UVJ0 657 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 THEMISQ8N1K5 641 aaPredicted RBP13.43□□□□□ -0.26
ABCA8-208ENST00000586539 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
ABCA8-208ENST00000586539 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
ABCA8-208ENST00000586539 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
ABCA8-208ENST00000586539 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
ABCA8-208ENST00000586539 REC8O95072 547 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 VGLL3A8MV65 326 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 TPM1P09493 284 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
ABCA8-208ENST00000586539 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 RASSF8Q8NHQ8 419 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
ABCA8-208ENST00000586539 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
ABCA8-208ENST00000586539 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
ABCA8-208ENST00000586539 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
ABCA8-208ENST00000586539 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
ABCA8-208ENST00000586539 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
ABCA8-208ENST00000586539 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
ABCA8-208ENST00000586539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 AKAP17AQ02040 695 aaKnown RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 DZIP1Q86YF9 867 aaKnown RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 ELL2O00472 640 aaPredicted RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 AEBP2Q6ZN18 517 aaPredicted RBP13.4□□□□□ -0.26
ABCA8-208ENST00000586539 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
ABCA8-208ENST00000586539 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
ABCA8-208ENST00000586539 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.27
ABCA8-208ENST00000586539 TRAK2O60296 914 aa13.39□□□□□ -0.27
ABCA8-208ENST00000586539 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
ABCA8-208ENST00000586539 CNPY4Q8N129 248 aa13.39□□□□□ -0.27
ABCA8-208ENST00000586539 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
ABCA8-208ENST00000586539 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
ABCA8-208ENST00000586539 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 SF3A1Q15459 793 aaKnown RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
ABCA8-208ENST00000586539 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
ABCA8-208ENST00000586539 MARCH6O60337 910 aa13.38□□□□□ -0.27
ABCA8-208ENST00000586539 ERLIN1O75477 346 aa13.38□□□□□ -0.27
ABCA8-208ENST00000586539 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
ABCA8-208ENST00000586539 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
ABCA8-208ENST00000586539 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
ABCA8-208ENST00000586539 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
ABCA8-208ENST00000586539 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
ABCA8-208ENST00000586539 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 H3BQV1 296 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 IPO7O95373 1038 aaKnown RBP13.37□□□□□ -0.27
ABCA8-208ENST00000586539 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 NLRP6P59044 892 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 ERC2O15083 957 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 CUL7Q14999 1698 aa13.37□□□□□ -0.27
ABCA8-208ENST00000586539 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
ABCA8-208ENST00000586539 GTF2F1P35269 517 aaKnown RBP eCLIP13.36□□□□□ -0.27
ABCA8-208ENST00000586539 PAF1Q8N7H5 531 aa13.36□□□□□ -0.27
ABCA8-208ENST00000586539 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
ABCA8-208ENST00000586539 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
ABCA8-208ENST00000586539 SLC26A8Q96RN1 970 aa13.36□□□□□ -0.27
ABCA8-208ENST00000586539 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
ABCA8-208ENST00000586539 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 RASSF4Q9H2L5 321 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
ABCA8-208ENST00000586539 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 MSH5O43196 834 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 TXLNBQ8N3L3 684 aa13.35□□□□□ -0.27
ABCA8-208ENST00000586539 CLCN1P35523 988 aa13.34□□□□□ -0.27
ABCA8-208ENST00000586539 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
ABCA8-208ENST00000586539 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
ABCA8-208ENST00000586539 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
ABCA8-208ENST00000586539 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
ABCA8-208ENST00000586539 SEPT6Q14141 434 aa13.34□□□□□ -0.27
ABCA8-208ENST00000586539 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
ABCA8-208ENST00000586539 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms