RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 DEF6Q9H4E7 631 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 PANK3Q9H999 370 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 RAI14Q9P0K7 980 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 FEZ2Q9UHY8 353 aaPredicted RBP11.4□□□□□ -0.58
SKA2-207ENST00000583380 RTEL1-TNFRSF6BF6WH68 1400 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
SKA2-207ENST00000583380 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.59
SKA2-207ENST00000583380 CLSTN1O94985 981 aa11.39□□□□□ -0.59
SKA2-207ENST00000583380 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
SKA2-207ENST00000583380 GUCY2CP25092 1073 aa11.39□□□□□ -0.59
SKA2-207ENST00000583380 SETQ01105 290 aaPredicted RBP11.39□□□□□ -0.59
SKA2-207ENST00000583380 HDAC1Q13547 482 aaPredicted RBP11.39□□□□□ -0.59
SKA2-207ENST00000583380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
SKA2-207ENST00000583380 UGGT2Q9NYU1 1516 aa11.39□□□□□ -0.59
SKA2-207ENST00000583380 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
SKA2-207ENST00000583380 CYP2C19P33261 490 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
SKA2-207ENST00000583380 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 IGF1RP08069 1367 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 LAMC1P11047 1609 aa11.38□□□□□ -0.59
SKA2-207ENST00000583380 PIK3C2GO75747 1445 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 KIF3CO14782 793 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 IGHDP01880 384 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 CASQ1P31415 396 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 SSR1P43307 286 aaKnown RBP11.37□□□□□ -0.59
SKA2-207ENST00000583380 MCM2P49736 904 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.59
SKA2-207ENST00000583380 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
SKA2-207ENST00000583380 KIF18AQ8NI77 898 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 LMBRD1Q9NUN5 540 aa11.37□□□□□ -0.59
SKA2-207ENST00000583380 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 NEMFO60524 1076 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 TPM1P09493 284 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 USP8P40818 1118 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
SKA2-207ENST00000583380 BANK1Q8NDB2 785 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 MED4Q9NPJ6 270 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 DONSONQ9NYP3 566 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
SKA2-207ENST00000583380 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
SKA2-207ENST00000583380 SHROOM2Q13796 1616 aa11.35□□□□□ -0.59
SKA2-207ENST00000583380 IVLP07476 585 aa11.35□□□□□ -0.59
SKA2-207ENST00000583380 U2AF2P26368 475 aaKnown RBP eCLIP11.35□□□□□ -0.59
SKA2-207ENST00000583380 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
SKA2-207ENST00000583380 TICAM2Q86XR7 235 aa11.35□□□□□ -0.59
SKA2-207ENST00000583380 KIAA1524Q8TCG1 905 aa11.35□□□□□ -0.59
SKA2-207ENST00000583380 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
SKA2-207ENST00000583380 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SKA2-207ENST00000583380 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
SKA2-207ENST00000583380 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
SKA2-207ENST00000583380 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
SKA2-207ENST00000583380 NOP2P46087 812 aaKnown RBP11.34□□□□□ -0.59
SKA2-207ENST00000583380 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
SKA2-207ENST00000583380 CCDC112Q8NEF3 446 aa11.34□□□□□ -0.59
SKA2-207ENST00000583380 AK7Q96M32 723 aa11.34□□□□□ -0.59
SKA2-207ENST00000583380 KANK1Q14678 1352 aa11.33□□□□□ -0.6
SKA2-207ENST00000583380 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
SKA2-207ENST00000583380 WWC1Q8IX03 1113 aa11.33□□□□□ -0.6
SKA2-207ENST00000583380 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
SKA2-207ENST00000583380 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
SKA2-207ENST00000583380 PSD3Q9NYI0 1048 aa11.33□□□□□ -0.6
SKA2-207ENST00000583380 SYNMO15061 1565 aa11.33□□□□□ -0.6
SKA2-207ENST00000583380 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
SKA2-207ENST00000583380 SOX12O15370 315 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
SKA2-207ENST00000583380 ST18O60284 1047 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 CAPN2P17655 700 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 SUGP1Q8IWZ8 645 aaKnown RBP11.32□□□□□ -0.6
SKA2-207ENST00000583380 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 PLCD4Q9BRC7 762 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 UTP14AQ9BVJ6 771 aaKnown RBP11.32□□□□□ -0.6
SKA2-207ENST00000583380 RSPH14Q9UHP6 348 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 ELP1O95163 1332 aa11.32□□□□□ -0.6
SKA2-207ENST00000583380 CAVIN2O95810 425 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 SKAP1Q86WV1 359 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
SKA2-207ENST00000583380 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
SKA2-207ENST00000583380 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
SKA2-207ENST00000583380 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
SKA2-207ENST00000583380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
SKA2-207ENST00000583380 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
SKA2-207ENST00000583380 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
SKA2-207ENST00000583380 LIG1P18858 919 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 GOLGA5Q8TBA6 731 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 DDX19BQ9UMR2 479 aa11.29□□□□□ -0.6
SKA2-207ENST00000583380 COL17A1Q9UMD9 1497 aaPredicted RBP11.28□□□□□ -0.6
SKA2-207ENST00000583380 NEFHP12036 1026 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms