RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
ITGB4-209ENST00000583327 CGNL1Q0VF96 1302 aa18.71■□□□□ 0.59
ITGB4-209ENST00000583327 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
ITGB4-209ENST00000583327 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
ITGB4-209ENST00000583327 NHSL1Q5SYE7 1610 aa18.7■□□□□ 0.58
ITGB4-209ENST00000583327 NSD2O96028 1365 aa18.69■□□□□ 0.58
ITGB4-209ENST00000583327 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
ITGB4-209ENST00000583327 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
ITGB4-209ENST00000583327 ROBO1Q9Y6N7 1651 aa18.69■□□□□ 0.58
ITGB4-209ENST00000583327 AHDC1Q5TGY3 1603 aaPredicted RBP18.68■□□□□ 0.58
ITGB4-209ENST00000583327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
ITGB4-209ENST00000583327 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-209ENST00000583327 NME9Q86XW9 330 aa18.66■□□□□ 0.58
ITGB4-209ENST00000583327 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
ITGB4-209ENST00000583327 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
ITGB4-209ENST00000583327 XPCQ01831 940 aaPredicted RBP18.65■□□□□ 0.58
ITGB4-209ENST00000583327 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
ITGB4-209ENST00000583327 ZRANB1Q9UGI0 708 aa18.64■□□□□ 0.57
ITGB4-209ENST00000583327 OVOS2A0A0J9YW53 1432 aa18.64■□□□□ 0.57
ITGB4-209ENST00000583327 OVOS2Q6IE36 1432 aa18.64■□□□□ 0.57
ITGB4-209ENST00000583327 PIK3C2AO00443 1686 aa18.63■□□□□ 0.57
ITGB4-209ENST00000583327 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
ITGB4-209ENST00000583327 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
ITGB4-209ENST00000583327 RALBP1Q15311 655 aa18.63■□□□□ 0.57
ITGB4-209ENST00000583327 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
ITGB4-209ENST00000583327 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
ITGB4-209ENST00000583327 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
ITGB4-209ENST00000583327 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
ITGB4-209ENST00000583327 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
ITGB4-209ENST00000583327 ANP32CO43423 234 aa18.61■□□□□ 0.57
ITGB4-209ENST00000583327 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
ITGB4-209ENST00000583327 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
ITGB4-209ENST00000583327 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
ITGB4-209ENST00000583327 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
ITGB4-209ENST00000583327 USP19O94966 1318 aa18.59■□□□□ 0.57
ITGB4-209ENST00000583327 NLRP6P59044 892 aa18.59■□□□□ 0.57
ITGB4-209ENST00000583327 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
ITGB4-209ENST00000583327 NLRP13Q86W25 1043 aa18.59■□□□□ 0.57
ITGB4-209ENST00000583327 LRRC59Q96AG4 307 aaKnown RBP18.59■□□□□ 0.57
ITGB4-209ENST00000583327 COG3Q96JB2 828 aa18.59■□□□□ 0.57
ITGB4-209ENST00000583327 ARHGEF10O15013 1369 aa18.58■□□□□ 0.57
ITGB4-209ENST00000583327 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
ITGB4-209ENST00000583327 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
ITGB4-209ENST00000583327 MIER1Q8N108 512 aa18.57■□□□□ 0.56
ITGB4-209ENST00000583327 SLIT3O75094 1523 aa18.55■□□□□ 0.56
ITGB4-209ENST00000583327 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
ITGB4-209ENST00000583327 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
ITGB4-209ENST00000583327 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
ITGB4-209ENST00000583327 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
ITGB4-209ENST00000583327 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
ITGB4-209ENST00000583327 GCP02774 474 aa18.52■□□□□ 0.56
ITGB4-209ENST00000583327 FBLN1P23142 703 aa18.52■□□□□ 0.56
ITGB4-209ENST00000583327 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
ITGB4-209ENST00000583327 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
ITGB4-209ENST00000583327 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
ITGB4-209ENST00000583327 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.55
ITGB4-209ENST00000583327 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
ITGB4-209ENST00000583327 NFAT5O94916 1531 aa18.51■□□□□ 0.55
ITGB4-209ENST00000583327 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
ITGB4-209ENST00000583327 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
ITGB4-209ENST00000583327 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
ITGB4-209ENST00000583327 SMG6Q86US8 1419 aaKnown RBP18.49■□□□□ 0.55
ITGB4-209ENST00000583327 INSRP06213 1382 aa18.49■□□□□ 0.55
ITGB4-209ENST00000583327 HSPA1LP34931 641 aa18.48■□□□□ 0.55
ITGB4-209ENST00000583327 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
ITGB4-209ENST00000583327 MTHFSP49914 203 aa18.48■□□□□ 0.55
ITGB4-209ENST00000583327 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
ITGB4-209ENST00000583327 KIF24Q5T7B8 1368 aa18.47■□□□□ 0.55
ITGB4-209ENST00000583327 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
ITGB4-209ENST00000583327 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
ITGB4-209ENST00000583327 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
ITGB4-209ENST00000583327 FBXO41Q8TF61 875 aa18.46■□□□□ 0.55
ITGB4-209ENST00000583327 MAP3K19Q56UN5 1328 aa18.46■□□□□ 0.55
ITGB4-209ENST00000583327 CPDO75976 1380 aa18.45■□□□□ 0.54
ITGB4-209ENST00000583327 JCADQ9P266 1359 aa18.45■□□□□ 0.54
ITGB4-209ENST00000583327 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
ITGB4-209ENST00000583327 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
ITGB4-209ENST00000583327 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
ITGB4-209ENST00000583327 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
ITGB4-209ENST00000583327 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
ITGB4-209ENST00000583327 IP6K1Q92551 441 aa18.42■□□□□ 0.54
ITGB4-209ENST00000583327 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-209ENST00000583327 CDK12Q9NYV4 1490 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-209ENST00000583327 PEAK1Q9H792 1746 aa18.41■□□□□ 0.54
ITGB4-209ENST00000583327 RTL1A6NKG5 1358 aa18.41■□□□□ 0.54
ITGB4-209ENST00000583327 SOX12O15370 315 aa18.4■□□□□ 0.54
ITGB4-209ENST00000583327 HOXC9P31274 260 aa18.4■□□□□ 0.54
ITGB4-209ENST00000583327 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
ITGB4-209ENST00000583327 FLT4P35916 1363 aa18.4■□□□□ 0.54
ITGB4-209ENST00000583327 ABCC6O95255 1503 aa18.39■□□□□ 0.54
ITGB4-209ENST00000583327 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
ITGB4-209ENST00000583327 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
ITGB4-209ENST00000583327 COL18A1P39060 1754 aa18.39■□□□□ 0.53
ITGB4-209ENST00000583327 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
ITGB4-209ENST00000583327 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
ITGB4-209ENST00000583327 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
ITGB4-209ENST00000583327 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
ITGB4-209ENST00000583327 AMPHP49418 695 aa18.37■□□□□ 0.53
ITGB4-209ENST00000583327 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
ITGB4-209ENST00000583327 LTN1O94822 1766 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms