RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 BAG6P46379 1132 aa12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 EHBP1L1Q8N3D4 1523 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 UTRNP46939 3433 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 UBTFP17480 764 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 SLIT2O94813 1529 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 G3V3G9 751 aa12.63□□□□□ -0.39
CDK5RAP3-221ENST00000581662 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
CDK5RAP3-221ENST00000581662 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 AMOTL2Q9Y2J4 779 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 POTEMA6NI47 508 aa12.58□□□□□ -0.4
CDK5RAP3-221ENST00000581662 ERBINQ96RT1 1412 aa12.58□□□□□ -0.4
CDK5RAP3-221ENST00000581662 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
CDK5RAP3-221ENST00000581662 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RGL2O15211 777 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 SOX12O15370 315 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 VPS72Q15906 364 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 PPP1R1BQ9UD71 204 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 PXDNQ92626 1479 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 STK25O00506 426 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KANK1Q14678 1352 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PTPN23Q9H3S7 1636 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SLC34A2O95436 690 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SNPHO15079 494 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KCNQ2O43526 872 aa12.49□□□□□ -0.41
CDK5RAP3-221ENST00000581662 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-221ENST00000581662 RREB1Q92766 1687 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ADGRL2O95490 1459 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 METP08581 1390 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NRKQ7Z2Y5 1582 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 ST18O60284 1047 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NLRP6P59044 892 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
CDK5RAP3-221ENST00000581662 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
CDK5RAP3-221ENST00000581662 CHD4Q14839 1912 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
CDK5RAP3-221ENST00000581662 CCDC9Q9Y3X0 531 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-221ENST00000581662 MYOM1P52179 1685 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 A0A0G2JS52 829 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MYT1Q01538 1121 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 NBPF8Q3BBV2 869 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms