RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
RNU4ATAC-201ENST00000580972 NALCNQ8IZF0 1738 aa8.28□□□□□ -1.08
RNU4ATAC-201ENST00000580972 MST1RQ04912 1400 aa8.28□□□□□ -1.08
RNU4ATAC-201ENST00000580972 SETD1BQ9UPS6 1966 aaKnown RBP8.28□□□□□ -1.08
RNU4ATAC-201ENST00000580972 FOXO3O43524 673 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 PAK3O75914 559 aaPredicted RBP8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 ATF3P18847 181 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 CCDC146Q8IYE0 955 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 COG3Q96JB2 828 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 ZNF692Q9BU19 519 aaPredicted RBP8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 STRCQ7RTU9 1775 aa8.27□□□□□ -1.09
RNU4ATAC-201ENST00000580972 STRCP1A6NGW2 1772 aa8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 CENPBP07199 599 aaPredicted RBP8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 TOPAZ1Q8N9V7 1692 aa8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 OVOS2A0A0J9YW53 1432 aa8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 OVOS2Q6IE36 1432 aa8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
RNU4ATAC-201ENST00000580972 MSH6P52701 1360 aa8.25□□□□□ -1.09
RNU4ATAC-201ENST00000580972 WDR43Q15061 677 aaKnown RBP eCLIP8.25□□□□□ -1.09
RNU4ATAC-201ENST00000580972 COL3A1P02461 1466 aaPredicted RBP8.25□□□□□ -1.09
RNU4ATAC-201ENST00000580972 FMN2Q9NZ56 1722 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 BLMP54132 1417 aaPredicted RBP8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 NLRP6P59044 892 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 PSME1Q06323 249 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 TTC21AQ8NDW8 1320 aa8.24□□□□□ -1.09
RNU4ATAC-201ENST00000580972 NCOA3Q9Y6Q9 1424 aa8.23□□□□□ -1.09
RNU4ATAC-201ENST00000580972 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
RNU4ATAC-201ENST00000580972 CADPS2Q86UW7 1296 aa8.23□□□□□ -1.09
RNU4ATAC-201ENST00000580972 MAP3K19Q56UN5 1328 aa8.23□□□□□ -1.09
RNU4ATAC-201ENST00000580972 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 DCCP43146 1447 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 ABTB2Q8N961 1025 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 DMRT2Q9Y5R5 561 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 ZBED9Q6R2W3 1325 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 SCAF1Q9H7N4 1312 aaKnown RBP8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
RNU4ATAC-201ENST00000580972 APAF1O14727 1248 aa8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 U2AF1L5P0DN76 240 aaPredicted RBP8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 IL13P35225 146 aa8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 U2AF1Q01081 240 aaKnown RBP eCLIP8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 HSP90AB2PQ58FF8 381 aa8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 HMOX1P09601 288 aa8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 EIF4A2Q14240 407 aaKnown RBP8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 AEBP1Q8IUX7 1158 aa8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 MON2Q7Z3U7 1717 aa8.2□□□□□ -1.1
RNU4ATAC-201ENST00000580972 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
RNU4ATAC-201ENST00000580972 AEBP2Q6ZN18 517 aaPredicted RBP8.19□□□□□ -1.1
RNU4ATAC-201ENST00000580972 INSRP06213 1382 aa8.19□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 LTV1Q96GA3 475 aaPredicted RBP8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 USP19O94966 1318 aa8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PXDNQ92626 1479 aa8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 CDK12Q9NYV4 1490 aaPredicted RBP8.18□□□□□ -1.1
RNU4ATAC-201ENST00000580972 AKAP12Q02952 1782 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 GCP02774 474 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 HOXC9P31274 260 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 AMPHP49418 695 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 TCP11L2Q8N4U5 519 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 USHBP1Q8N6Y0 703 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 RUNDC1Q96C34 613 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 RSPH6AQ9H0K4 717 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SPINK5Q9NQ38 1064 aaPredicted RBP8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 NPHP3Q7Z494 1330 aa8.17□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 NFAT5O94916 1531 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 ZC3H6P61129 1189 aaKnown RBP8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 IQSEC2Q5JU85 1478 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SPATA31A3Q5VYP0 1347 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 TNS3Q68CZ2 1445 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PHACTR3Q96KR7 559 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 NUDCQ9Y266 331 aa8.16□□□□□ -1.1
RNU4ATAC-201ENST00000580972 ITSN1Q15811 1721 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 FLT4P35916 1363 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 CHRNA2Q15822 529 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 ARHGEF25Q86VW2 580 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
RNU4ATAC-201ENST00000580972 KIF20BQ96Q89 1820 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms