RNA–Protein interactions for RNA: ENST00000576788.1

TRAP1-217, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-217ENST00000576788 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
TRAP1-217ENST00000576788 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
TRAP1-217ENST00000576788 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
TRAP1-217ENST00000576788 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
TRAP1-217ENST00000576788 ACEP12821 1306 aa13.92□□□□□ -0.18
TRAP1-217ENST00000576788 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
TRAP1-217ENST00000576788 NUTM2GQ5VZR2 741 aa13.92□□□□□ -0.18
TRAP1-217ENST00000576788 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAP1-217ENST00000576788 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
TRAP1-217ENST00000576788 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
TRAP1-217ENST00000576788 PPIP5K1Q6PFW1 1433 aa13.91□□□□□ -0.18
TRAP1-217ENST00000576788 A0A0G2JS52 829 aa13.91□□□□□ -0.18
TRAP1-217ENST00000576788 MYT1Q01538 1121 aa13.91□□□□□ -0.18
TRAP1-217ENST00000576788 SLIT2O94813 1529 aa13.9□□□□□ -0.18
TRAP1-217ENST00000576788 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
TRAP1-217ENST00000576788 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
TRAP1-217ENST00000576788 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
TRAP1-217ENST00000576788 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
TRAP1-217ENST00000576788 CARD11Q9BXL7 1154 aa13.89□□□□□ -0.19
TRAP1-217ENST00000576788 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
TRAP1-217ENST00000576788 POLR3AO14802 1390 aaPredicted RBP13.88□□□□□ -0.19
TRAP1-217ENST00000576788 CRYBG1Q9Y4K1 1723 aa13.88□□□□□ -0.19
TRAP1-217ENST00000576788 PLEKHG3A1L390 1219 aa13.88□□□□□ -0.19
TRAP1-217ENST00000576788 BTG4Q9NY30 223 aa13.88□□□□□ -0.19
TRAP1-217ENST00000576788 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
TRAP1-217ENST00000576788 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
TRAP1-217ENST00000576788 GLI3P10071 1580 aa13.87□□□□□ -0.19
TRAP1-217ENST00000576788 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
TRAP1-217ENST00000576788 BRWD3Q6RI45 1802 aa13.86□□□□□ -0.19
TRAP1-217ENST00000576788 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
TRAP1-217ENST00000576788 VPS72Q15906 364 aa13.86□□□□□ -0.19
TRAP1-217ENST00000576788 NRAPQ86VF7 1730 aa13.85□□□□□ -0.19
TRAP1-217ENST00000576788 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
TRAP1-217ENST00000576788 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
TRAP1-217ENST00000576788 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
TRAP1-217ENST00000576788 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
TRAP1-217ENST00000576788 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
TRAP1-217ENST00000576788 KIAA0232Q92628 1395 aa13.83□□□□□ -0.19
TRAP1-217ENST00000576788 EVA1CP58658 441 aa13.83□□□□□ -0.2
TRAP1-217ENST00000576788 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
TRAP1-217ENST00000576788 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
TRAP1-217ENST00000576788 USP6P35125 1406 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 NRKQ7Z2Y5 1582 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 NLRP6P59044 892 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
TRAP1-217ENST00000576788 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 EP400Q96L91 3159 aa13.81□□□□□ -0.2
TRAP1-217ENST00000576788 BRD4O60885 1362 aaPredicted RBP13.8□□□□□ -0.2
TRAP1-217ENST00000576788 SF3B2Q13435 895 aaKnown RBP13.79□□□□□ -0.2
TRAP1-217ENST00000576788 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
TRAP1-217ENST00000576788 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
TRAP1-217ENST00000576788 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
TRAP1-217ENST00000576788 SOX12O15370 315 aa13.78□□□□□ -0.2
TRAP1-217ENST00000576788 GCP02774 474 aa13.78□□□□□ -0.2
TRAP1-217ENST00000576788 KTN1Q86UP2 1357 aaKnown RBP13.78□□□□□ -0.2
TRAP1-217ENST00000576788 PIK3C2AO00443 1686 aa13.78□□□□□ -0.2
TRAP1-217ENST00000576788 USP19O94966 1318 aa13.77□□□□□ -0.21
TRAP1-217ENST00000576788 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
TRAP1-217ENST00000576788 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
TRAP1-217ENST00000576788 USP47Q96K76 1375 aa13.77□□□□□ -0.21
TRAP1-217ENST00000576788 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
TRAP1-217ENST00000576788 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
TRAP1-217ENST00000576788 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
TRAP1-217ENST00000576788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAP1-217ENST00000576788 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
TRAP1-217ENST00000576788 CPDO75976 1380 aa13.74□□□□□ -0.21
TRAP1-217ENST00000576788 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
TRAP1-217ENST00000576788 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
TRAP1-217ENST00000576788 ST20-MTHFSA0A0A6YYL1 179 aa13.74□□□□□ -0.21
TRAP1-217ENST00000576788 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
TRAP1-217ENST00000576788 TESK2Q96S53 571 aa13.74□□□□□ -0.21
TRAP1-217ENST00000576788 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
TRAP1-217ENST00000576788 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
TRAP1-217ENST00000576788 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
TRAP1-217ENST00000576788 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
TRAP1-217ENST00000576788 CPSF1Q10570 1443 aaKnown RBP13.73□□□□□ -0.21
TRAP1-217ENST00000576788 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 FAM182BQ5T319 152 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 SLIT3O75094 1523 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 RGPD5Q99666 1765 aa13.72□□□□□ -0.21
TRAP1-217ENST00000576788 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
TRAP1-217ENST00000576788 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
TRAP1-217ENST00000576788 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
TRAP1-217ENST00000576788 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
TRAP1-217ENST00000576788 THSD7AQ9UPZ6 1657 aa13.71□□□□□ -0.21
TRAP1-217ENST00000576788 CSB-PGBD3P0DP91 1061 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 PDE3BQ13370 1112 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 NINLQ9Y2I6 1382 aa13.7□□□□□ -0.22
TRAP1-217ENST00000576788 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
TRAP1-217ENST00000576788 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
TRAP1-217ENST00000576788 TMF1P82094 1093 aa13.69□□□□□ -0.22
TRAP1-217ENST00000576788 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
TRAP1-217ENST00000576788 LTN1O94822 1766 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms