RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
PRPF8-207ENST00000573681 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
PRPF8-207ENST00000573681 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
PRPF8-207ENST00000573681 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
PRPF8-207ENST00000573681 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
PRPF8-207ENST00000573681 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
PRPF8-207ENST00000573681 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
PRPF8-207ENST00000573681 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
PRPF8-207ENST00000573681 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
PRPF8-207ENST00000573681 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
PRPF8-207ENST00000573681 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
PRPF8-207ENST00000573681 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
PRPF8-207ENST00000573681 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
PRPF8-207ENST00000573681 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
PRPF8-207ENST00000573681 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
PRPF8-207ENST00000573681 AKAP12Q02952 1782 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 ANKRD26Q9UPS8 1709 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 APAF1O14727 1248 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
PRPF8-207ENST00000573681 ATF3P18847 181 aa17.02■□□□□ 0.32
PRPF8-207ENST00000573681 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 8.3
PRPF8-207ENST00000573681 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
PRPF8-207ENST00000573681 NEFLP07196 543 aa17.01■□□□□ 0.31
PRPF8-207ENST00000573681 PSME1Q06323 249 aa17.01■□□□□ 0.31
PRPF8-207ENST00000573681 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
PRPF8-207ENST00000573681 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
PRPF8-207ENST00000573681 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
PRPF8-207ENST00000573681 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
PRPF8-207ENST00000573681 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
PRPF8-207ENST00000573681 TMEM94Q12767 1356 aa16.99■□□□□ 0.31
PRPF8-207ENST00000573681 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
PRPF8-207ENST00000573681 FCHSD2O94868 740 aa16.98■□□□□ 0.31
PRPF8-207ENST00000573681 NLRP6P59044 892 aa16.98■□□□□ 0.31
PRPF8-207ENST00000573681 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
PRPF8-207ENST00000573681 OVOS2A0A0J9YW53 1432 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 OVOS2Q6IE36 1432 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 FBLN1P23142 703 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
PRPF8-207ENST00000573681 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
PRPF8-207ENST00000573681 DCCP43146 1447 aa16.96■□□□□ 0.31
PRPF8-207ENST00000573681 IL13P35225 146 aa16.96■□□□□ 0.31
PRPF8-207ENST00000573681 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
PRPF8-207ENST00000573681 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
PRPF8-207ENST00000573681 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-207ENST00000573681 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
PRPF8-207ENST00000573681 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
PRPF8-207ENST00000573681 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
PRPF8-207ENST00000573681 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
PRPF8-207ENST00000573681 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
PRPF8-207ENST00000573681 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
PRPF8-207ENST00000573681 MSH6P52701 1360 aa16.93■□□□□ 0.3
PRPF8-207ENST00000573681 NEFMP07197 916 aa16.93■□□□□ 0.3
PRPF8-207ENST00000573681 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
PRPF8-207ENST00000573681 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
PRPF8-207ENST00000573681 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
PRPF8-207ENST00000573681 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
PRPF8-207ENST00000573681 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
PRPF8-207ENST00000573681 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
PRPF8-207ENST00000573681 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
PRPF8-207ENST00000573681 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
PRPF8-207ENST00000573681 FOXO3O43524 673 aa16.91■□□□□ 0.3
PRPF8-207ENST00000573681 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
PRPF8-207ENST00000573681 FKBP8Q14318 412 aa16.91■□□□□ 0.3
PRPF8-207ENST00000573681 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
PRPF8-207ENST00000573681 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
PRPF8-207ENST00000573681 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
PRPF8-207ENST00000573681 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
PRPF8-207ENST00000573681 E9PSI1 815 aa16.9■□□□□ 0.3
PRPF8-207ENST00000573681 KCNH5Q8NCM2 988 aa16.9■□□□□ 0.3
PRPF8-207ENST00000573681 STRCQ7RTU9 1775 aa16.89■□□□□ 0.3
PRPF8-207ENST00000573681 AMPHP49418 695 aa16.89■□□□□ 0.29
PRPF8-207ENST00000573681 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
PRPF8-207ENST00000573681 MST1RQ04912 1400 aa16.88■□□□□ 0.29
PRPF8-207ENST00000573681 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
PRPF8-207ENST00000573681 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
PRPF8-207ENST00000573681 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
PRPF8-207ENST00000573681 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
PRPF8-207ENST00000573681 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
PRPF8-207ENST00000573681 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
PRPF8-207ENST00000573681 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
PRPF8-207ENST00000573681 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
PRPF8-207ENST00000573681 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
PRPF8-207ENST00000573681 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
PRPF8-207ENST00000573681 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
PRPF8-207ENST00000573681 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
PRPF8-207ENST00000573681 FLT4P35916 1363 aa16.86■□□□□ 0.29
PRPF8-207ENST00000573681 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
PRPF8-207ENST00000573681 SOX12O15370 315 aa16.85■□□□□ 0.29
PRPF8-207ENST00000573681 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
PRPF8-207ENST00000573681 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
PRPF8-207ENST00000573681 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
PRPF8-207ENST00000573681 RIPK4P57078 832 aa16.84■□□□□ 0.29
PRPF8-207ENST00000573681 IQSEC2Q5JU85 1478 aa16.84■□□□□ 0.29
PRPF8-207ENST00000573681 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms