RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 TTC21AQ8NDW8 1320 aa18.46■□□□□ 0.55
GABARAP-202ENST00000570856 FYB1O15117 783 aa18.45■□□□□ 0.54
GABARAP-202ENST00000570856 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
GABARAP-202ENST00000570856 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
GABARAP-202ENST00000570856 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
GABARAP-202ENST00000570856 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
GABARAP-202ENST00000570856 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
GABARAP-202ENST00000570856 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
GABARAP-202ENST00000570856 ALS2Q96Q42 1657 aa18.41■□□□□ 0.54
GABARAP-202ENST00000570856 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
GABARAP-202ENST00000570856 PXDNQ92626 1479 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 FOXO3O43524 673 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 CC2D1BQ5T0F9 858 aaKnown RBP18.4■□□□□ 0.54
GABARAP-202ENST00000570856 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
GABARAP-202ENST00000570856 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
GABARAP-202ENST00000570856 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
GABARAP-202ENST00000570856 PSME1Q06323 249 aa18.38■□□□□ 0.53
GABARAP-202ENST00000570856 NME9Q86XW9 330 aa18.38■□□□□ 0.53
GABARAP-202ENST00000570856 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
GABARAP-202ENST00000570856 MYBBP1AQ9BQG0 1328 aaKnown RBP18.38■□□□□ 0.53
GABARAP-202ENST00000570856 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
GABARAP-202ENST00000570856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
GABARAP-202ENST00000570856 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
GABARAP-202ENST00000570856 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
GABARAP-202ENST00000570856 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
GABARAP-202ENST00000570856 TOM1O60784 492 aa18.36■□□□□ 0.53
GABARAP-202ENST00000570856 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
GABARAP-202ENST00000570856 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
GABARAP-202ENST00000570856 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
GABARAP-202ENST00000570856 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
GABARAP-202ENST00000570856 NLRP13Q86W25 1043 aa18.33■□□□□ 0.52
GABARAP-202ENST00000570856 COG3Q96JB2 828 aa18.32■□□□□ 0.52
GABARAP-202ENST00000570856 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
GABARAP-202ENST00000570856 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
GABARAP-202ENST00000570856 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
GABARAP-202ENST00000570856 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
GABARAP-202ENST00000570856 SLIT3O75094 1523 aa18.31■□□□□ 0.52
GABARAP-202ENST00000570856 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
GABARAP-202ENST00000570856 ABTB2Q8N961 1025 aa18.3■□□□□ 0.52
GABARAP-202ENST00000570856 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
GABARAP-202ENST00000570856 USP19O94966 1318 aa18.29■□□□□ 0.52
GABARAP-202ENST00000570856 DDX17Q92841 729 aaKnown RBP18.29■□□□□ 0.52
GABARAP-202ENST00000570856 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
GABARAP-202ENST00000570856 NLRP6P59044 892 aa18.28■□□□□ 0.52
GABARAP-202ENST00000570856 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
GABARAP-202ENST00000570856 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
GABARAP-202ENST00000570856 INSRP06213 1382 aa18.28■□□□□ 0.52
GABARAP-202ENST00000570856 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.52
GABARAP-202ENST00000570856 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
GABARAP-202ENST00000570856 CCDC184Q52MB2 194 aa18.27■□□□□ 0.52
GABARAP-202ENST00000570856 NFAT5O94916 1531 aa18.27■□□□□ 0.51
GABARAP-202ENST00000570856 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.51
GABARAP-202ENST00000570856 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
GABARAP-202ENST00000570856 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
GABARAP-202ENST00000570856 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
GABARAP-202ENST00000570856 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
GABARAP-202ENST00000570856 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
GABARAP-202ENST00000570856 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
GABARAP-202ENST00000570856 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
GABARAP-202ENST00000570856 LTN1O94822 1766 aa18.23■□□□□ 0.51
GABARAP-202ENST00000570856 MTHFSP49914 203 aa18.23■□□□□ 0.51
GABARAP-202ENST00000570856 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
GABARAP-202ENST00000570856 COL3A1P02461 1466 aaPredicted RBP18.22■□□□□ 0.51
GABARAP-202ENST00000570856 CDK12Q9NYV4 1490 aaPredicted RBP18.22■□□□□ 0.51
GABARAP-202ENST00000570856 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
GABARAP-202ENST00000570856 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
GABARAP-202ENST00000570856 PEAK1Q9H792 1746 aa18.22■□□□□ 0.51
GABARAP-202ENST00000570856 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
GABARAP-202ENST00000570856 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
GABARAP-202ENST00000570856 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
GABARAP-202ENST00000570856 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
GABARAP-202ENST00000570856 GCP02774 474 aa18.19■□□□□ 0.5
GABARAP-202ENST00000570856 FBLN1P23142 703 aa18.19■□□□□ 0.5
GABARAP-202ENST00000570856 ABCC6O95255 1503 aa18.18■□□□□ 0.5
GABARAP-202ENST00000570856 MAP3K19Q56UN5 1328 aa18.18■□□□□ 0.5
GABARAP-202ENST00000570856 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
GABARAP-202ENST00000570856 COL18A1P39060 1754 aa18.17■□□□□ 0.5
GABARAP-202ENST00000570856 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
GABARAP-202ENST00000570856 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
GABARAP-202ENST00000570856 CPDO75976 1380 aa18.17■□□□□ 0.5
GABARAP-202ENST00000570856 RRS1Q15050 365 aaKnown RBP18.16■□□□□ 0.5
GABARAP-202ENST00000570856 LMOD2Q6P5Q4 547 aa18.16■□□□□ 0.5
GABARAP-202ENST00000570856 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
GABARAP-202ENST00000570856 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
GABARAP-202ENST00000570856 FLT4P35916 1363 aa18.15■□□□□ 0.5
GABARAP-202ENST00000570856 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
GABARAP-202ENST00000570856 IP6K1Q92551 441 aa18.12■□□□□ 0.49
GABARAP-202ENST00000570856 HOXC9P31274 260 aa18.11■□□□□ 0.49
GABARAP-202ENST00000570856 RGPD5Q99666 1765 aa18.11■□□□□ 0.49
GABARAP-202ENST00000570856 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
GABARAP-202ENST00000570856 BLMP54132 1417 aaPredicted RBP18.1■□□□□ 0.49
GABARAP-202ENST00000570856 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
GABARAP-202ENST00000570856 IL13P35225 146 aa18.1■□□□□ 0.49
GABARAP-202ENST00000570856 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
GABARAP-202ENST00000570856 AMPHP49418 695 aa18.09■□□□□ 0.49
GABARAP-202ENST00000570856 JCADQ9P266 1359 aa18.08■□□□□ 0.49
GABARAP-202ENST00000570856 SOX12O15370 315 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms