RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 UCN2Q96RP3 112 aa4.96□□□□□ -1.62
CNOT1-221ENST00000569924 HMX1Q9NP08 348 aaPredicted RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 KIAA0556O60303 1618 aa4.96□□□□□ -1.62
CNOT1-221ENST00000569924 ZCCHC11Q5TAX3 1644 aaKnown RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 TTBK1Q5TCY1 1321 aaPredicted RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 UNCXA6NJT0 531 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 KDM4AO75164 1064 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 DNAJB2P25686 324 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 USP46P62068 366 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 CDCA8Q53HL2 280 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 ZNF454Q8N9F8 522 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 PRR7Q8TB68 274 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 ADAM33Q9BZ11 813 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 IGSF5Q9NSI5 407 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 USP35Q9P2H5 1018 aa4.95□□□□□ -1.62
CNOT1-221ENST00000569924 MAFBQ9Y5Q3 323 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-221ENST00000569924 WDR7Q9Y4E6 1490 aa4.94□□□□□ -1.62
CNOT1-221ENST00000569924 C3orf67Q6ZVT6 689 aa4.94□□□□□ -1.62
CNOT1-221ENST00000569924 CCER1Q8TC90 406 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-221ENST00000569924 TMEM134Q9H6X4 195 aa4.94□□□□□ -1.62
CNOT1-221ENST00000569924 FAM198AQ9UFP1 575 aa4.94□□□□□ -1.62
CNOT1-221ENST00000569924 COLQQ9Y215 455 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-221ENST00000569924 GOLGA3Q08378 1498 aa4.94□□□□□ -1.62
CNOT1-221ENST00000569924 MAGI3Q5TCQ9 1506 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 ABCA8O94911 1581 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 FDX1P10109 184 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 ERCC3P19447 782 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 SEMA3FQ13275 785 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 ELOAQ14241 798 aaKnown RBP4.93□□□□□ -1.62
CNOT1-221ENST00000569924 RSPH4AQ5TD94 716 aa4.93□□□□□ -1.62
CNOT1-221ENST00000569924 HELBQ8NG08 1087 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-221ENST00000569924 CFAP43Q8NDM7 1665 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 CTTNBP2Q8WZ74 1663 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 HOXA2O43364 376 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 ATP9BO43861 1147 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 TBC1D9Q6ZT07 1266 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 NUDT18Q6ZVK8 323 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 TXNDC2Q86VQ3 553 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 RDH13Q8NBN7 331 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 LRRN4Q8WUT4 740 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 PCDHGC3Q9UN70 934 aa4.92□□□□□ -1.62
CNOT1-221ENST00000569924 CD109Q6YHK3 1445 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 HSP90B1P14625 803 aaKnown RBP4.91□□□□□ -1.62
CNOT1-221ENST00000569924 GCGRP47871 477 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 MTMR2Q13614 643 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 PNMA1Q8ND90 353 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 PUS7Q96PZ0 661 aaKnown RBP4.91□□□□□ -1.62
CNOT1-221ENST00000569924 TSKSQ9UJT2 592 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 PRXQ9BXM0 1461 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 HECW2Q9P2P5 1572 aa4.91□□□□□ -1.62
CNOT1-221ENST00000569924 NBPF26B4DH59 902 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 C3orf80F5H4A9 247 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 EIF4G2P78344 907 aaKnown RBP eCLIP4.9□□□□□ -1.63
CNOT1-221ENST00000569924 KANK4Q5T7N3 995 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-221ENST00000569924 EPS8L1Q8TE68 723 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 TATDN2Q93075 761 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 ARAP3Q8WWN8 1544 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 PHLDB1Q86UU1 1377 aa4.9□□□□□ -1.63
CNOT1-221ENST00000569924 COL9A1P20849 921 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 ARID4AP29374 1257 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-221ENST00000569924 TMEM164Q5U3C3 297 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 PHLDB3Q6NSJ2 640 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 DNAJC14Q6Y2X3 702 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-221ENST00000569924 SLF2Q8IX21 1173 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 FAM9AQ8IZU1 332 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-221ENST00000569924 TSC1Q92574 1164 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 SIRT1Q96EB6 747 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 KCNH8Q96L42 1107 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 KIAA1522Q9P206 1035 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-221ENST00000569924 PNMA3Q9UL41 463 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 ZMIZ1Q9ULJ6 1067 aa4.89□□□□□ -1.63
CNOT1-221ENST00000569924 ABCA9Q8IUA7 1624 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 POTEFA5A3E0 1075 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 CFAP99D6REC4 459 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 GUCA2AQ02747 115 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 PACS2Q86VP3 889 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 PELP1Q8IZL8 1130 aaKnown RBP4.88□□□□□ -1.63
CNOT1-221ENST00000569924 NFATC2IPQ8NCF5 419 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
CNOT1-221ENST00000569924 ATP10BO94823 1461 aa4.88□□□□□ -1.63
CNOT1-221ENST00000569924 KIF21BO75037 1637 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 TRIM6-TRIM34B2RNG4 842 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 PPP1R3GB7ZBB8 358 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 NUDT7P0C024 238 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 SSFA2P28290 1259 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 NR6A1Q15406 480 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 STK32AQ8WU08 396 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 SLC39A7Q92504 469 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 BCL2L12Q9HB09 334 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 NOVA2Q9UNW9 492 aaKnown RBP4.87□□□□□ -1.63
CNOT1-221ENST00000569924 NEO1Q92859 1461 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 SAMD9Q5K651 1589 aa4.87□□□□□ -1.63
CNOT1-221ENST00000569924 SOWAHDA6NJG2 315 aa4.86□□□□□ -1.63
CNOT1-221ENST00000569924 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
CNOT1-221ENST00000569924 GABBR2O75899 941 aa4.86□□□□□ -1.63
CNOT1-221ENST00000569924 C7P10643 843 aa4.86□□□□□ -1.63
CNOT1-221ENST00000569924 ZNF16P17020 682 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-221ENST00000569924 HLA-CQ95604 372 aa4.86□□□□□ -1.63
CNOT1-221ENST00000569924 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.86□□□□□ -1.63
CNOT1-221ENST00000569924 ADAMTSL3P82987 1691 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms