RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
LINC00564-201ENST00000567258 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
LINC00564-201ENST00000567258 SGIP1Q9BQI5 828 aa15.17■□□□□ 0.02
LINC00564-201ENST00000567258 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
LINC00564-201ENST00000567258 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
LINC00564-201ENST00000567258 HRCP23327 699 aa15.16■□□□□ 0.02
LINC00564-201ENST00000567258 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
LINC00564-201ENST00000567258 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
LINC00564-201ENST00000567258 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
LINC00564-201ENST00000567258 LRP6O75581 1613 aa15.15■□□□□ 0.02
LINC00564-201ENST00000567258 NUBP1P53384 320 aa15.15■□□□□ 0.02
LINC00564-201ENST00000567258 DDX17Q92841 729 aaKnown RBP15.15■□□□□ 0.02
LINC00564-201ENST00000567258 ORAI2Q96SN7 254 aa15.15■□□□□ 0.02
LINC00564-201ENST00000567258 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
LINC00564-201ENST00000567258 YTHDC2Q9H6S0 1430 aaKnown RBP15.15■□□□□ 0.02
LINC00564-201ENST00000567258 MYOM2P54296 1465 aa15.14■□□□□ 0.01
LINC00564-201ENST00000567258 WAPLQ7Z5K2 1190 aa15.14■□□□□ 0.01
LINC00564-201ENST00000567258 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
LINC00564-201ENST00000567258 TECPR2O15040 1411 aa15.14■□□□□ 0.01
LINC00564-201ENST00000567258 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
LINC00564-201ENST00000567258 CFAP70Q5T0N1 1121 aa15.12■□□□□ 0.01
LINC00564-201ENST00000567258 IER5LQ5T953 404 aa15.12■□□□□ 0.01
LINC00564-201ENST00000567258 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
LINC00564-201ENST00000567258 PNPLA6Q8IY17 1366 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 STAC3Q96MF2 364 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 POGKQ9P215 609 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 FMN2Q9NZ56 1722 aa15.11■□□□□ 0.01
LINC00564-201ENST00000567258 NRXN1Q9ULB1 1477 aa15.1■□□□□ 0.01
LINC00564-201ENST00000567258 C8orf37Q96NL8 207 aa15.1■□□□□ 0.01
LINC00564-201ENST00000567258 RGPD8O14715 1765 aaPredicted RBP15.1■□□□□ 0.01
LINC00564-201ENST00000567258 AFF2P51816 1311 aa15.1■□□□□ 0.01
LINC00564-201ENST00000567258 SOS2Q07890 1332 aaPredicted RBP15.1■□□□□ 0.01
LINC00564-201ENST00000567258 RXRBP28702 533 aa15.09■□□□□ 0.01
LINC00564-201ENST00000567258 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
LINC00564-201ENST00000567258 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
LINC00564-201ENST00000567258 FOXO3O43524 673 aa15.08■□□□□ 0
LINC00564-201ENST00000567258 ADAMTS2O95450 1211 aa15.08■□□□□ 0
LINC00564-201ENST00000567258 NGLY1Q96IV0 654 aa15.08■□□□□ 0
LINC00564-201ENST00000567258 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
LINC00564-201ENST00000567258 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00564-201ENST00000567258 PRAM1Q96QH2 718 aa15.07■□□□□ 0
LINC00564-201ENST00000567258 FAM212AQ96EL1 285 aa15.06■□□□□ 0
LINC00564-201ENST00000567258 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
LINC00564-201ENST00000567258 COL22A1Q8NFW1 1626 aaPredicted RBP15.05■□□□□ -0
LINC00564-201ENST00000567258 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ -0
LINC00564-201ENST00000567258 DLC1Q96QB1 1528 aa15.04■□□□□ -0
LINC00564-201ENST00000567258 PSME1Q06323 249 aa15.04■□□□□ -0
LINC00564-201ENST00000567258 QTRT2Q9H974 415 aaKnown RBP15.04■□□□□ -0
LINC00564-201ENST00000567258 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
LINC00564-201ENST00000567258 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
LINC00564-201ENST00000567258 PXDNQ92626 1479 aa15.02■□□□□ -0
LINC00564-201ENST00000567258 HAP1P54257 671 aaPredicted RBP15.02■□□□□ -0
LINC00564-201ENST00000567258 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
LINC00564-201ENST00000567258 EIF3AQ14152 1382 aaKnown RBP15.01□□□□□ -0.01
LINC00564-201ENST00000567258 RBM6P78332 1123 aaKnown RBP15.01□□□□□ -0.01
LINC00564-201ENST00000567258 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
LINC00564-201ENST00000567258 USP21Q9UK80 565 aa15.01□□□□□ -0.01
LINC00564-201ENST00000567258 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
LINC00564-201ENST00000567258 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
LINC00564-201ENST00000567258 LMOD2Q6P5Q4 547 aa14.99□□□□□ -0.01
LINC00564-201ENST00000567258 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
LINC00564-201ENST00000567258 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
LINC00564-201ENST00000567258 FKBP8Q14318 412 aa14.98□□□□□ -0.01
LINC00564-201ENST00000567258 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
LINC00564-201ENST00000567258 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
LINC00564-201ENST00000567258 ANKARQ7Z5J8 1434 aa14.98□□□□□ -0.01
LINC00564-201ENST00000567258 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
LINC00564-201ENST00000567258 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
LINC00564-201ENST00000567258 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
LINC00564-201ENST00000567258 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
LINC00564-201ENST00000567258 ARHGEF28Q8N1W1 1705 aaKnown RBP14.97□□□□□ -0.01
LINC00564-201ENST00000567258 PLCG2P16885 1265 aa14.96□□□□□ -0.01
LINC00564-201ENST00000567258 PMFBP1Q8TBY8 1022 aa14.96□□□□□ -0.01
LINC00564-201ENST00000567258 FNBP4Q8N3X1 1017 aaPredicted RBP14.95□□□□□ -0.02
LINC00564-201ENST00000567258 GPRASP1Q5JY77 1395 aa14.95□□□□□ -0.02
LINC00564-201ENST00000567258 TNS3Q68CZ2 1445 aa14.94□□□□□ -0.02
LINC00564-201ENST00000567258 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
LINC00564-201ENST00000567258 USP32Q8NFA0 1604 aa14.94□□□□□ -0.02
LINC00564-201ENST00000567258 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
LINC00564-201ENST00000567258 TULP4Q9NRJ4 1543 aa14.93□□□□□ -0.02
LINC00564-201ENST00000567258 NGDNQ8NEJ9 315 aaKnown RBP14.93□□□□□ -0.02
LINC00564-201ENST00000567258 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
LINC00564-201ENST00000567258 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00564-201ENST00000567258 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.92□□□□□ -0.02
LINC00564-201ENST00000567258 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
LINC00564-201ENST00000567258 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
LINC00564-201ENST00000567258 RGS12O14924 1447 aa14.91□□□□□ -0.02
LINC00564-201ENST00000567258 IRX5P78411 483 aaPredicted RBP14.9□□□□□ -0.02
LINC00564-201ENST00000567258 ATRNO75882 1429 aa14.9□□□□□ -0.02
LINC00564-201ENST00000567258 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
LINC00564-201ENST00000567258 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
LINC00564-201ENST00000567258 PYGBP11216 843 aa14.88□□□□□ -0.03
LINC00564-201ENST00000567258 CABLES1Q8TDN4 633 aa14.88□□□□□ -0.03
LINC00564-201ENST00000567258 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
LINC00564-201ENST00000567258 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
LINC00564-201ENST00000567258 PLCH1Q4KWH8 1693 aa14.87□□□□□ -0.03
LINC00564-201ENST00000567258 ATAD2Q6PL18 1390 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms