RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
SNHG20-204ENST00000566583 UBAP1LF5GYI3 381 aa21.3■■□□□ 1
SNHG20-204ENST00000566583 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
SNHG20-204ENST00000566583 SOS2Q07890 1332 aaPredicted RBP21.3■■□□□ 1
SNHG20-204ENST00000566583 TTC21BQ7Z4L5 1316 aa21.3■■□□□ 1
SNHG20-204ENST00000566583 PHLPP1O60346 1717 aa21.29■■□□□ 1
SNHG20-204ENST00000566583 DDX17Q92841 729 aaKnown RBP21.29■■□□□ 1
SNHG20-204ENST00000566583 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
SNHG20-204ENST00000566583 CRYBG1Q9Y4K1 1723 aa21.27■■□□□ 1
SNHG20-204ENST00000566583 SBNO1A3KN83 1393 aa21.27■■□□□ 1
SNHG20-204ENST00000566583 TTC21AQ8NDW8 1320 aa21.27■■□□□ 1
SNHG20-204ENST00000566583 KRT28Q7Z3Y7 464 aa21.27■□□□□ 0.99
SNHG20-204ENST00000566583 KNSTRNQ9Y448 316 aa21.27■□□□□ 0.99
SNHG20-204ENST00000566583 PSME1Q06323 249 aa21.26■□□□□ 0.99
SNHG20-204ENST00000566583 FYB1O15117 783 aa21.25■□□□□ 0.99
SNHG20-204ENST00000566583 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
SNHG20-204ENST00000566583 XPCQ01831 940 aaPredicted RBP21.24■□□□□ 0.99
SNHG20-204ENST00000566583 NSD2O96028 1365 aa21.24■□□□□ 0.99
SNHG20-204ENST00000566583 USP31Q70CQ4 1352 aa21.24■□□□□ 0.99
SNHG20-204ENST00000566583 OVOS2A0A0J9YW53 1432 aa21.23■□□□□ 0.99
SNHG20-204ENST00000566583 TNS3Q68CZ2 1445 aa21.23■□□□□ 0.99
SNHG20-204ENST00000566583 OVOS2Q6IE36 1432 aa21.23■□□□□ 0.99
SNHG20-204ENST00000566583 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
SNHG20-204ENST00000566583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNHG20-204ENST00000566583 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
SNHG20-204ENST00000566583 ABCA3Q99758 1704 aa21.21■□□□□ 0.99
SNHG20-204ENST00000566583 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
SNHG20-204ENST00000566583 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
SNHG20-204ENST00000566583 NME9Q86XW9 330 aa21.21■□□□□ 0.99
SNHG20-204ENST00000566583 COL22A1Q8NFW1 1626 aaPredicted RBP21.2■□□□□ 0.98
SNHG20-204ENST00000566583 MAP2P11137 1827 aaKnown RBP21.2■□□□□ 0.98
SNHG20-204ENST00000566583 PHRF1Q9P1Y6 1649 aaKnown RBP21.19■□□□□ 0.98
SNHG20-204ENST00000566583 PARD3Q8TEW0 1356 aa21.19■□□□□ 0.98
SNHG20-204ENST00000566583 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
SNHG20-204ENST00000566583 SLIT3O75094 1523 aa21.18■□□□□ 0.98
SNHG20-204ENST00000566583 GGNBP2Q9H3C7 697 aa21.18■□□□□ 0.98
SNHG20-204ENST00000566583 SHPRHQ149N8 1683 aa21.16■□□□□ 0.98
SNHG20-204ENST00000566583 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
SNHG20-204ENST00000566583 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
SNHG20-204ENST00000566583 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
SNHG20-204ENST00000566583 USP19O94966 1318 aa21.15■□□□□ 0.98
SNHG20-204ENST00000566583 ARHGEF10O15013 1369 aa21.15■□□□□ 0.98
SNHG20-204ENST00000566583 ABTB2Q8N961 1025 aa21.14■□□□□ 0.97
SNHG20-204ENST00000566583 NFAT5O94916 1531 aa21.13■□□□□ 0.97
SNHG20-204ENST00000566583 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SNHG20-204ENST00000566583 LTN1O94822 1766 aa21.12■□□□□ 0.97
SNHG20-204ENST00000566583 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
SNHG20-204ENST00000566583 NLRP6P59044 892 aa21.11■□□□□ 0.97
SNHG20-204ENST00000566583 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
SNHG20-204ENST00000566583 RALBP1Q15311 655 aa21.1■□□□□ 0.97
SNHG20-204ENST00000566583 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
SNHG20-204ENST00000566583 COG3Q96JB2 828 aa21.1■□□□□ 0.97
SNHG20-204ENST00000566583 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
SNHG20-204ENST00000566583 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
SNHG20-204ENST00000566583 MORC1Q86VD1 984 aa21.09■□□□□ 0.97
SNHG20-204ENST00000566583 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
SNHG20-204ENST00000566583 ANP32CO43423 234 aa21.07■□□□□ 0.96
SNHG20-204ENST00000566583 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
SNHG20-204ENST00000566583 COL18A1P39060 1754 aa21.07■□□□□ 0.96
SNHG20-204ENST00000566583 HSPA1LP34931 641 aa21.05■□□□□ 0.96
SNHG20-204ENST00000566583 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
SNHG20-204ENST00000566583 CNGB1Q14028 1251 aaPredicted RBP21.04■□□□□ 0.96
SNHG20-204ENST00000566583 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
SNHG20-204ENST00000566583 FBLN1P23142 703 aa21.04■□□□□ 0.96
SNHG20-204ENST00000566583 FBXO41Q8TF61 875 aa21.04■□□□□ 0.96
SNHG20-204ENST00000566583 RGPD5Q99666 1765 aa21.03■□□□□ 0.96
SNHG20-204ENST00000566583 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
SNHG20-204ENST00000566583 GCP02774 474 aa21.03■□□□□ 0.96
SNHG20-204ENST00000566583 JCADQ9P266 1359 aa21.02■□□□□ 0.96
SNHG20-204ENST00000566583 MIER1Q8N108 512 aa21.02■□□□□ 0.95
SNHG20-204ENST00000566583 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.95
SNHG20-204ENST00000566583 CABLES1Q8TDN4 633 aa21.02■□□□□ 0.95
SNHG20-204ENST00000566583 POLKQ9UBT6 870 aa21.01■□□□□ 0.95
SNHG20-204ENST00000566583 LMO7Q8WWI1 1683 aa21■□□□□ 0.95
SNHG20-204ENST00000566583 ABCC6O95255 1503 aa21■□□□□ 0.95
SNHG20-204ENST00000566583 TNNT2P45379 298 aaPredicted RBP21■□□□□ 0.95
SNHG20-204ENST00000566583 CPDO75976 1380 aa21■□□□□ 0.95
SNHG20-204ENST00000566583 COL3A1P02461 1466 aaPredicted RBP20.99■□□□□ 0.95
SNHG20-204ENST00000566583 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
SNHG20-204ENST00000566583 MAP3K19Q56UN5 1328 aa20.98■□□□□ 0.95
SNHG20-204ENST00000566583 INSRP06213 1382 aa20.98■□□□□ 0.95
SNHG20-204ENST00000566583 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
SNHG20-204ENST00000566583 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
SNHG20-204ENST00000566583 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
SNHG20-204ENST00000566583 EMILIN1Q9Y6C2 1016 aa20.97■□□□□ 0.95
SNHG20-204ENST00000566583 MTHFSP49914 203 aa20.96■□□□□ 0.95
SNHG20-204ENST00000566583 RTL1A6NKG5 1358 aa20.95■□□□□ 0.94
SNHG20-204ENST00000566583 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
SNHG20-204ENST00000566583 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
SNHG20-204ENST00000566583 SOX12O15370 315 aa20.94■□□□□ 0.94
SNHG20-204ENST00000566583 LRP6O75581 1613 aa20.94■□□□□ 0.94
SNHG20-204ENST00000566583 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
SNHG20-204ENST00000566583 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
SNHG20-204ENST00000566583 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
SNHG20-204ENST00000566583 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
SNHG20-204ENST00000566583 FLT4P35916 1363 aa20.92■□□□□ 0.94
SNHG20-204ENST00000566583 RGPD2P0DJD1 1756 aa20.92■□□□□ 0.94
SNHG20-204ENST00000566583 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
SNHG20-204ENST00000566583 RGPD1P0DJD0 1748 aa20.92■□□□□ 0.94
SNHG20-204ENST00000566583 NWD2Q9ULI1 1742 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms