RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
CHD9-217ENST00000565832 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHD9-217ENST00000565832 ZRANB1Q9UGI0 708 aa8.43□□□□□ -1.06
CHD9-217ENST00000565832 MYBBP1AQ9BQG0 1328 aaKnown RBP8.43□□□□□ -1.06
CHD9-217ENST00000565832 UBR1Q8IWV7 1749 aa8.43□□□□□ -1.06
CHD9-217ENST00000565832 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
CHD9-217ENST00000565832 MYOM1P52179 1685 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 EFCAB3Q8N7B9 438 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 CDK19Q9BWU1 502 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 EVC2Q86UK5 1308 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 KDM5AP29375 1690 aaKnown RBP8.42□□□□□ -1.06
CHD9-217ENST00000565832 SBNO2Q9Y2G9 1366 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 TNNT2P45379 298 aaPredicted RBP8.42□□□□□ -1.06
CHD9-217ENST00000565832 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
CHD9-217ENST00000565832 MYO3AQ8NEV4 1616 aa8.42□□□□□ -1.06
CHD9-217ENST00000565832 NRXN3Q9Y4C0 1643 aa8.41□□□□□ -1.06
CHD9-217ENST00000565832 CD44P16070 742 aaKnown RBP8.41□□□□□ -1.06
CHD9-217ENST00000565832 NCKAP5LQ9HCH0 1330 aa8.41□□□□□ -1.06
CHD9-217ENST00000565832 POTEHQ6S545 545 aa8.41□□□□□ -1.06
CHD9-217ENST00000565832 THEMISQ8N1K5 641 aaPredicted RBP8.41□□□□□ -1.06
CHD9-217ENST00000565832 PHF12Q96QT6 1004 aa8.41□□□□□ -1.06
CHD9-217ENST00000565832 TULP4Q9NRJ4 1543 aa8.41□□□□□ -1.06
CHD9-217ENST00000565832 PPP1R37O75864 691 aa8.4□□□□□ -1.06
CHD9-217ENST00000565832 PPP2R1AP30153 589 aa8.4□□□□□ -1.06
CHD9-217ENST00000565832 NLRP13Q86W25 1043 aa8.4□□□□□ -1.06
CHD9-217ENST00000565832 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.06
CHD9-217ENST00000565832 EID1Q9Y6B2 187 aa8.4□□□□□ -1.06
CHD9-217ENST00000565832 RIMS1Q86UR5 1692 aaKnown RBP8.4□□□□□ -1.07
CHD9-217ENST00000565832 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 SETD1AO15047 1707 aaKnown RBP8.39□□□□□ -1.07
CHD9-217ENST00000565832 NLRP1Q9C000 1473 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 FBXO22Q8NEZ5 403 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 LRPPRCP42704 1394 aaKnown RBP8.39□□□□□ -1.07
CHD9-217ENST00000565832 ABCC11Q96J66 1382 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 ADAMTS13Q76LX8 1427 aa8.39□□□□□ -1.07
CHD9-217ENST00000565832 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
CHD9-217ENST00000565832 PHF8Q9UPP1 1060 aa8.38□□□□□ -1.07
CHD9-217ENST00000565832 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
CHD9-217ENST00000565832 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
CHD9-217ENST00000565832 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
CHD9-217ENST00000565832 NSD3Q9BZ95 1437 aa8.38□□□□□ -1.07
CHD9-217ENST00000565832 NLRP6P59044 892 aa8.37□□□□□ -1.07
CHD9-217ENST00000565832 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
CHD9-217ENST00000565832 AMOTL2Q9Y2J4 779 aa8.37□□□□□ -1.07
CHD9-217ENST00000565832 FBLN1P23142 703 aa8.37□□□□□ -1.07
CHD9-217ENST00000565832 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
CHD9-217ENST00000565832 PTPRUQ92729 1446 aa8.36□□□□□ -1.07
CHD9-217ENST00000565832 PLEKHG1Q9ULL1 1385 aa8.36□□□□□ -1.07
CHD9-217ENST00000565832 WASLO00401 505 aaPredicted RBP8.36□□□□□ -1.07
CHD9-217ENST00000565832 SOX12O15370 315 aa8.36□□□□□ -1.07
CHD9-217ENST00000565832 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
CHD9-217ENST00000565832 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
CHD9-217ENST00000565832 MORC1Q86VD1 984 aa8.35□□□□□ -1.07
CHD9-217ENST00000565832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.079e-7■■□□□ 12.9
CHD9-217ENST00000565832 ADAMTSL3P82987 1691 aa8.35□□□□□ -1.07
CHD9-217ENST00000565832 PUS7Q96PZ0 661 aaKnown RBP8.35□□□□□ -1.07
CHD9-217ENST00000565832 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
CHD9-217ENST00000565832 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.07
CHD9-217ENST00000565832 TBX22Q9Y458 520 aa8.34□□□□□ -1.07
CHD9-217ENST00000565832 ARHGAP23Q9P227 1491 aa8.34□□□□□ -1.07
CHD9-217ENST00000565832 ANKRD36BQ8N2N9 1353 aa8.34□□□□□ -1.07
CHD9-217ENST00000565832 SLIT1O75093 1534 aa8.34□□□□□ -1.07
CHD9-217ENST00000565832 FYB1O15117 783 aa8.34□□□□□ -1.08
CHD9-217ENST00000565832 KCNA6P17658 529 aa8.34□□□□□ -1.08
CHD9-217ENST00000565832 ANKLE2Q86XL3 938 aa8.34□□□□□ -1.08
CHD9-217ENST00000565832 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.08
CHD9-217ENST00000565832 MED14O60244 1454 aa8.34□□□□□ -1.08
CHD9-217ENST00000565832 CD163L1Q9NR16 1453 aa8.34□□□□□ -1.08
CHD9-217ENST00000565832 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
CHD9-217ENST00000565832 ZBED9Q6R2W3 1325 aa8.33□□□□□ -1.08
CHD9-217ENST00000565832 CEP170BQ9Y4F5 1589 aaPredicted RBP8.33□□□□□ -1.08
CHD9-217ENST00000565832 NPC1L1Q9UHC9 1359 aa8.33□□□□□ -1.08
CHD9-217ENST00000565832 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
CHD9-217ENST00000565832 MTHFSP49914 203 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
CHD9-217ENST00000565832 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 TERF2IPQ9NYB0 399 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 TRPC6Q9Y210 931 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
CHD9-217ENST00000565832 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.31□□□□□ -1.08
CHD9-217ENST00000565832 TMEM106CQ9BVX2 250 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 TECPR2O15040 1411 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 WDR43Q15061 677 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD9-217ENST00000565832 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
CHD9-217ENST00000565832 PMFBP1Q8TBY8 1022 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 MS4A3Q96HJ5 214 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
CHD9-217ENST00000565832 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
CHD9-217ENST00000565832 HSPA2P54652 639 aa8.29□□□□□ -1.08
CHD9-217ENST00000565832 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CHD9-217ENST00000565832 KDM4FA0A1W2PPD8 638 aa8.29□□□□□ -1.08
CHD9-217ENST00000565832 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
CHD9-217ENST00000565832 GOLGA2Q08379 1002 aa8.29□□□□□ -1.08
CHD9-217ENST00000565832 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
CHD9-217ENST00000565832 ACEP12821 1306 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms