RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
SF3B3-205ENST00000564899 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
SF3B3-205ENST00000564899 LRP5O75197 1615 aa15.35■□□□□ 0.05
SF3B3-205ENST00000564899 TULP4Q9NRJ4 1543 aa15.34■□□□□ 0.05
SF3B3-205ENST00000564899 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
SF3B3-205ENST00000564899 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
SF3B3-205ENST00000564899 PLCH1Q4KWH8 1693 aa15.33■□□□□ 0.04
SF3B3-205ENST00000564899 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
SF3B3-205ENST00000564899 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
SF3B3-205ENST00000564899 FMN2Q9NZ56 1722 aa15.32■□□□□ 0.04
SF3B3-205ENST00000564899 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
SF3B3-205ENST00000564899 SPATA31A3Q5VYP0 1347 aa15.32■□□□□ 0.04
SF3B3-205ENST00000564899 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
SF3B3-205ENST00000564899 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
SF3B3-205ENST00000564899 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
SF3B3-205ENST00000564899 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
SF3B3-205ENST00000564899 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
SF3B3-205ENST00000564899 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
SF3B3-205ENST00000564899 WASLO00401 505 aaPredicted RBP15.28■□□□□ 0.04
SF3B3-205ENST00000564899 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
SF3B3-205ENST00000564899 KIF1AQ12756 1690 aa15.26■□□□□ 0.03
SF3B3-205ENST00000564899 VPS72Q15906 364 aa15.26■□□□□ 0.03
SF3B3-205ENST00000564899 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
SF3B3-205ENST00000564899 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
SF3B3-205ENST00000564899 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
SF3B3-205ENST00000564899 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
SF3B3-205ENST00000564899 NRAPQ86VF7 1730 aa15.25■□□□□ 0.03
SF3B3-205ENST00000564899 NWD2Q9ULI1 1742 aa15.25■□□□□ 0.03
SF3B3-205ENST00000564899 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
SF3B3-205ENST00000564899 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
SF3B3-205ENST00000564899 NINLQ9Y2I6 1382 aa15.24■□□□□ 0.03
SF3B3-205ENST00000564899 MYOM1P52179 1685 aa15.23■□□□□ 0.03
SF3B3-205ENST00000564899 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
SF3B3-205ENST00000564899 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
SF3B3-205ENST00000564899 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
SF3B3-205ENST00000564899 PANK3Q9H999 370 aa15.22■□□□□ 0.03
SF3B3-205ENST00000564899 EN1Q05925 392 aaPredicted RBP15.21■□□□□ 0.03
SF3B3-205ENST00000564899 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.03
SF3B3-205ENST00000564899 SLC12A5Q9H2X9 1139 aa15.21■□□□□ 0.03
SF3B3-205ENST00000564899 ATP7BP35670 1465 aa15.2■□□□□ 0.02
SF3B3-205ENST00000564899 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
SF3B3-205ENST00000564899 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
SF3B3-205ENST00000564899 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
SF3B3-205ENST00000564899 PRR36Q9H6K5 1346 aa15.19■□□□□ 0.02
SF3B3-205ENST00000564899 A0A0G2JS52 829 aa15.19■□□□□ 0.02
SF3B3-205ENST00000564899 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
SF3B3-205ENST00000564899 MYT1Q01538 1121 aa15.19■□□□□ 0.02
SF3B3-205ENST00000564899 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
SF3B3-205ENST00000564899 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SF3B3-205ENST00000564899 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
SF3B3-205ENST00000564899 TRPM3Q9HCF6 1732 aaPredicted RBP15.18■□□□□ 0.02
SF3B3-205ENST00000564899 ANP32CO43423 234 aa15.18■□□□□ 0.02
SF3B3-205ENST00000564899 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
SF3B3-205ENST00000564899 ANKRD36BQ8N2N9 1353 aa15.18■□□□□ 0.02
SF3B3-205ENST00000564899 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
SF3B3-205ENST00000564899 SBNO1A3KN83 1393 aa15.17■□□□□ 0.02
SF3B3-205ENST00000564899 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SF3B3-205ENST00000564899 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
SF3B3-205ENST00000564899 BAG6P46379 1132 aa15.16■□□□□ 0.02
SF3B3-205ENST00000564899 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
SF3B3-205ENST00000564899 TERF2IPQ9NYB0 399 aa15.16■□□□□ 0.02
SF3B3-205ENST00000564899 RGPD1P0DJD0 1748 aa15.16■□□□□ 0.02
SF3B3-205ENST00000564899 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
SF3B3-205ENST00000564899 CRYBG1Q9Y4K1 1723 aa15.15■□□□□ 0.02
SF3B3-205ENST00000564899 A0A1W2PP64 1363 aa15.15■□□□□ 0.02
SF3B3-205ENST00000564899 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-205ENST00000564899 HDGFL2Q7Z4V5 671 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-205ENST00000564899 MIER1Q8N108 512 aa15.15■□□□□ 0.02
SF3B3-205ENST00000564899 KNSTRNQ9Y448 316 aa15.15■□□□□ 0.02
SF3B3-205ENST00000564899 ALS2Q96Q42 1657 aa15.15■□□□□ 0.02
SF3B3-205ENST00000564899 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
SF3B3-205ENST00000564899 TOPAZ1Q8N9V7 1692 aa15.14■□□□□ 0.01
SF3B3-205ENST00000564899 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
SF3B3-205ENST00000564899 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
SF3B3-205ENST00000564899 ARHGEF10O15013 1369 aa15.13■□□□□ 0.01
SF3B3-205ENST00000564899 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
SF3B3-205ENST00000564899 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
SF3B3-205ENST00000564899 PLEKHG3A1L390 1219 aa15.12■□□□□ 0.01
SF3B3-205ENST00000564899 PSME1Q06323 249 aa15.12■□□□□ 0.01
SF3B3-205ENST00000564899 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-205ENST00000564899 UTRNP46939 3433 aa15.12■□□□□ 0.01
SF3B3-205ENST00000564899 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
SF3B3-205ENST00000564899 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
SF3B3-205ENST00000564899 SPATA31A5Q5VU36 1347 aa15.11■□□□□ 0.01
SF3B3-205ENST00000564899 SPATA31A7Q8IWB4 1347 aa15.11■□□□□ 0.01
SF3B3-205ENST00000564899 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
SF3B3-205ENST00000564899 CPSF1Q10570 1443 aaKnown RBP15.1■□□□□ 0.01
SF3B3-205ENST00000564899 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
SF3B3-205ENST00000564899 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
SF3B3-205ENST00000564899 PRKRIP1Q9H875 184 aaPredicted RBP15.1■□□□□ 0.01
SF3B3-205ENST00000564899 CAMKK2Q96RR4 588 aa15.09■□□□□ 0.01
SF3B3-205ENST00000564899 ACEP12821 1306 aa15.09■□□□□ 0.01
SF3B3-205ENST00000564899 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
SF3B3-205ENST00000564899 NGDNQ8NEJ9 315 aaKnown RBP15.08■□□□□ 0
SF3B3-205ENST00000564899 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
SF3B3-205ENST00000564899 CGNL1Q0VF96 1302 aa15.08■□□□□ 0
SF3B3-205ENST00000564899 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
SF3B3-205ENST00000564899 TRIM37O94972 964 aa15.07■□□□□ 0
SF3B3-205ENST00000564899 RALBP1Q15311 655 aa15.07■□□□□ 0
SF3B3-205ENST00000564899 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms