RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 SBNO2Q9Y2G9 1366 aa21.13■□□□□ 0.97
SNX29-203ENST00000564111 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
SNX29-203ENST00000564111 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
SNX29-203ENST00000564111 BCL9LQ86UU0 1499 aa21.13■□□□□ 0.97
SNX29-203ENST00000564111 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
SNX29-203ENST00000564111 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
SNX29-203ENST00000564111 UNC5CLQ8IV45 518 aa21.11■□□□□ 0.97
SNX29-203ENST00000564111 NRAPQ86VF7 1730 aa21.1■□□□□ 0.97
SNX29-203ENST00000564111 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
SNX29-203ENST00000564111 ACEP12821 1306 aa21.09■□□□□ 0.97
SNX29-203ENST00000564111 ATAD2Q6PL18 1390 aa21.08■□□□□ 0.97
SNX29-203ENST00000564111 AKAP12Q02952 1782 aa21.08■□□□□ 0.96
SNX29-203ENST00000564111 SLC24A1O60721 1099 aa21.08■□□□□ 0.96
SNX29-203ENST00000564111 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
SNX29-203ENST00000564111 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
SNX29-203ENST00000564111 UPF1Q92900 1129 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX29-203ENST00000564111 GJD4Q96KN9 370 aaPredicted RBP21.05■□□□□ 0.96
SNX29-203ENST00000564111 GLI3P10071 1580 aa21.04■□□□□ 0.96
SNX29-203ENST00000564111 VPS72Q15906 364 aa21.04■□□□□ 0.96
SNX29-203ENST00000564111 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
SNX29-203ENST00000564111 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
SNX29-203ENST00000564111 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
SNX29-203ENST00000564111 USP6P35125 1406 aa21.02■□□□□ 0.96
SNX29-203ENST00000564111 CABLES1Q8TDN4 633 aa21.02■□□□□ 0.96
SNX29-203ENST00000564111 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
SNX29-203ENST00000564111 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
SNX29-203ENST00000564111 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
SNX29-203ENST00000564111 MON2Q7Z3U7 1717 aa21■□□□□ 0.95
SNX29-203ENST00000564111 USP19O94966 1318 aa20.99■□□□□ 0.95
SNX29-203ENST00000564111 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
SNX29-203ENST00000564111 CPDO75976 1380 aa20.98■□□□□ 0.95
SNX29-203ENST00000564111 PRDM11Q9NQV5 511 aa20.97■□□□□ 0.95
SNX29-203ENST00000564111 SLIT3O75094 1523 aa20.97■□□□□ 0.95
SNX29-203ENST00000564111 FAM83GA6ND36 823 aa20.97■□□□□ 0.95
SNX29-203ENST00000564111 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
SNX29-203ENST00000564111 TTC21AQ8NDW8 1320 aa20.96■□□□□ 0.95
SNX29-203ENST00000564111 NINLQ9Y2I6 1382 aa20.96■□□□□ 0.95
SNX29-203ENST00000564111 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
SNX29-203ENST00000564111 CABP1Q9NZU7 370 aa20.96■□□□□ 0.95
SNX29-203ENST00000564111 PIK3C2AO00443 1686 aa20.95■□□□□ 0.94
SNX29-203ENST00000564111 CCDC125Q86Z20 511 aa20.95■□□□□ 0.94
SNX29-203ENST00000564111 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
SNX29-203ENST00000564111 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
SNX29-203ENST00000564111 BRWD3Q6RI45 1802 aa20.94■□□□□ 0.94
SNX29-203ENST00000564111 LMO7Q8WWI1 1683 aa20.94■□□□□ 0.94
SNX29-203ENST00000564111 BTG4Q9NY30 223 aa20.93■□□□□ 0.94
SNX29-203ENST00000564111 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
SNX29-203ENST00000564111 ABCC6O95255 1503 aa20.93■□□□□ 0.94
SNX29-203ENST00000564111 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
SNX29-203ENST00000564111 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
SNX29-203ENST00000564111 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
SNX29-203ENST00000564111 THSD7AQ9UPZ6 1657 aa20.91■□□□□ 0.94
SNX29-203ENST00000564111 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.94
SNX29-203ENST00000564111 SPATA31A5Q5VU36 1347 aa20.89■□□□□ 0.93
SNX29-203ENST00000564111 SPATA31A7Q8IWB4 1347 aa20.89■□□□□ 0.93
SNX29-203ENST00000564111 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
SNX29-203ENST00000564111 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
SNX29-203ENST00000564111 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
SNX29-203ENST00000564111 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
SNX29-203ENST00000564111 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
SNX29-203ENST00000564111 GCP02774 474 aa20.86■□□□□ 0.93
SNX29-203ENST00000564111 NLRP6P59044 892 aa20.86■□□□□ 0.93
SNX29-203ENST00000564111 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
SNX29-203ENST00000564111 EDC4Q6P2E9 1401 aaKnown RBP20.85■□□□□ 0.93
SNX29-203ENST00000564111 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
SNX29-203ENST00000564111 BLMP54132 1417 aaPredicted RBP20.84■□□□□ 0.93
SNX29-203ENST00000564111 CDCA8Q53HL2 280 aa20.84■□□□□ 0.93
SNX29-203ENST00000564111 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
SNX29-203ENST00000564111 ZC3H6P61129 1189 aaKnown RBP20.84■□□□□ 0.93
SNX29-203ENST00000564111 USP31Q70CQ4 1352 aa20.83■□□□□ 0.93
SNX29-203ENST00000564111 USP47Q96K76 1375 aa20.83■□□□□ 0.93
SNX29-203ENST00000564111 EVA1CP58658 441 aa20.83■□□□□ 0.93
SNX29-203ENST00000564111 KRT27Q7Z3Y8 459 aa20.83■□□□□ 0.93
SNX29-203ENST00000564111 SPATA31A1Q5TZJ5 1347 aa20.83■□□□□ 0.92
SNX29-203ENST00000564111 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
SNX29-203ENST00000564111 THRAP3Q9Y2W1 955 aaKnown RBP20.82■□□□□ 0.92
SNX29-203ENST00000564111 COL18A1P39060 1754 aa20.82■□□□□ 0.92
SNX29-203ENST00000564111 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
SNX29-203ENST00000564111 A0A0G2JS52 829 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 TMF1P82094 1093 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 MYT1Q01538 1121 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 CHRNA2Q15822 529 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
SNX29-203ENST00000564111 NFAT5O94916 1531 aa20.8■□□□□ 0.92
SNX29-203ENST00000564111 WNK3Q9BYP7 1800 aa20.8■□□□□ 0.92
SNX29-203ENST00000564111 BARGINQ6ZT62 677 aa20.8■□□□□ 0.92
SNX29-203ENST00000564111 PARP4Q9UKK3 1724 aaKnown RBP20.8■□□□□ 0.92
SNX29-203ENST00000564111 SF3B2Q13435 895 aaKnown RBP20.8■□□□□ 0.92
SNX29-203ENST00000564111 TESK2Q96S53 571 aa20.8■□□□□ 0.92
SNX29-203ENST00000564111 ST20-MTHFSA0A0A6YYL1 179 aa20.79■□□□□ 0.92
SNX29-203ENST00000564111 FAM98CQ17RN3 349 aaKnown RBP20.79■□□□□ 0.92
SNX29-203ENST00000564111 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
SNX29-203ENST00000564111 CRB1P82279 1406 aa20.78■□□□□ 0.92
SNX29-203ENST00000564111 C11orf95C9JLR9 678 aaPredicted RBP20.78■□□□□ 0.92
SNX29-203ENST00000564111 STRN4Q9NRL3 753 aa20.78■□□□□ 0.92
SNX29-203ENST00000564111 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
SNX29-203ENST00000564111 LTN1O94822 1766 aa20.75■□□□□ 0.91
SNX29-203ENST00000564111 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
SNX29-203ENST00000564111 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms