RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 EID1Q9Y6B2 187 aa15.3■□□□□ 0.04
COMMD4-209ENST00000564068 PLEKHH2Q8IVE3 1493 aa15.3■□□□□ 0.04
COMMD4-209ENST00000564068 A0A0G2JS52 829 aa15.29■□□□□ 0.04
COMMD4-209ENST00000564068 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
COMMD4-209ENST00000564068 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-209ENST00000564068 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-209ENST00000564068 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
COMMD4-209ENST00000564068 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
COMMD4-209ENST00000564068 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
COMMD4-209ENST00000564068 CBX1P83916 185 aa15.27■□□□□ 0.04
COMMD4-209ENST00000564068 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
COMMD4-209ENST00000564068 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
COMMD4-209ENST00000564068 FBXW7Q969H0 707 aa15.27■□□□□ 0.03
COMMD4-209ENST00000564068 RBM27Q9P2N5 1060 aaKnown RBP15.27■□□□□ 0.03
COMMD4-209ENST00000564068 FKBP5Q13451 457 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-209ENST00000564068 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-209ENST00000564068 H3BQV1 296 aa15.25■□□□□ 0.03
COMMD4-209ENST00000564068 NPHP1O15259 732 aa15.25■□□□□ 0.03
COMMD4-209ENST00000564068 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
COMMD4-209ENST00000564068 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-209ENST00000564068 COG3Q96JB2 828 aa15.25■□□□□ 0.03
COMMD4-209ENST00000564068 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 TRIM5Q9C035 493 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 ERC2O15083 957 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 GNL2Q13823 731 aaKnown RBP15.24■□□□□ 0.03
COMMD4-209ENST00000564068 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 CCAR2Q8N163 923 aaKnown RBP15.24■□□□□ 0.03
COMMD4-209ENST00000564068 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 TESK2Q96S53 571 aa15.24■□□□□ 0.03
COMMD4-209ENST00000564068 SF3A1Q15459 793 aaKnown RBP15.23■□□□□ 0.03
COMMD4-209ENST00000564068 UPF3BQ9BZI7 483 aaKnown RBP15.23■□□□□ 0.03
COMMD4-209ENST00000564068 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
COMMD4-209ENST00000564068 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
COMMD4-209ENST00000564068 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-209ENST00000564068 CCDC9Q9Y3X0 531 aaKnown RBP15.22■□□□□ 0.03
COMMD4-209ENST00000564068 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
COMMD4-209ENST00000564068 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
COMMD4-209ENST00000564068 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
COMMD4-209ENST00000564068 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
COMMD4-209ENST00000564068 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
COMMD4-209ENST00000564068 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.03
COMMD4-209ENST00000564068 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-209ENST00000564068 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
COMMD4-209ENST00000564068 MCM2P49736 904 aa15.21■□□□□ 0.03
COMMD4-209ENST00000564068 TPD52L1Q16890 204 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-209ENST00000564068 TPM4P67936 248 aa15.21■□□□□ 0.02
COMMD4-209ENST00000564068 UGGT2Q9NYU1 1516 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 AMPHP49418 695 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 USP25Q9UHP3 1055 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 FOSBP53539 338 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 ZSCAN23Q3MJ62 389 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
COMMD4-209ENST00000564068 CCDC141Q6ZP82 1450 aa15.19■□□□□ 0.02
COMMD4-209ENST00000564068 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
COMMD4-209ENST00000564068 ASXL2Q76L83 1435 aa15.19■□□□□ 0.02
COMMD4-209ENST00000564068 PDCL2Q8N4E4 241 aa15.19■□□□□ 0.02
COMMD4-209ENST00000564068 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
COMMD4-209ENST00000564068 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-209ENST00000564068 RUFY2Q8WXA3 655 aa15.18■□□□□ 0.02
COMMD4-209ENST00000564068 TSPYL4Q9UJ04 414 aa15.18■□□□□ 0.02
COMMD4-209ENST00000564068 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
COMMD4-209ENST00000564068 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
COMMD4-209ENST00000564068 ZNF830Q96NB3 372 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-209ENST00000564068 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
COMMD4-209ENST00000564068 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-209ENST00000564068 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
COMMD4-209ENST00000564068 WDR33Q9C0J8 1336 aaKnown RBP15.17■□□□□ 0.02
COMMD4-209ENST00000564068 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
COMMD4-209ENST00000564068 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-209ENST00000564068 SURF6O75683 361 aaKnown RBP15.16■□□□□ 0.02
COMMD4-209ENST00000564068 ATP10BO94823 1461 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 OFD1O75665 1012 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 MAP4K4O95819 1239 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-209ENST00000564068 ADAMTS12P58397 1594 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 LETM1O95202 739 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-209ENST00000564068 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-209ENST00000564068 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
COMMD4-209ENST00000564068 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
COMMD4-209ENST00000564068 NUP160Q12769 1436 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 CTTNBP2Q8WZ74 1663 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 TPM3P06753 285 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
COMMD4-209ENST00000564068 NUCB1Q02818 461 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 CCDC192P0DO97 292 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 CREBRFQ8IUR6 639 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 SNX21Q969T3 373 aa15.14■□□□□ 0.01
COMMD4-209ENST00000564068 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
COMMD4-209ENST00000564068 LARP6Q9BRS8 491 aaKnown RBP15.13■□□□□ 0.01
COMMD4-209ENST00000564068 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
COMMD4-209ENST00000564068 CABP1Q9NZU7 370 aa15.13■□□□□ 0.01
COMMD4-209ENST00000564068 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
COMMD4-209ENST00000564068 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
COMMD4-209ENST00000564068 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-209ENST00000564068 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
COMMD4-209ENST00000564068 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms