RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 RLBP1P12271 317 aa25.73■■□□□ 1.71
MSLN-205ENST00000563941 TNNQ9UQP3 1299 aa25.73■■□□□ 1.71
MSLN-205ENST00000563941 A2ML1A8K2U0 1454 aa25.72■■□□□ 1.71
MSLN-205ENST00000563941 SPATA31D1Q6ZQQ2 1576 aa25.72■■□□□ 1.71
MSLN-205ENST00000563941 DLC1Q96QB1 1528 aa25.71■■□□□ 1.71
MSLN-205ENST00000563941 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.71
MSLN-205ENST00000563941 CABP1Q9NZU7 370 aa25.7■■□□□ 1.71
MSLN-205ENST00000563941 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.7
MSLN-205ENST00000563941 MAPK8IP3Q9UPT6 1336 aa25.7■■□□□ 1.7
MSLN-205ENST00000563941 PMFBP1Q8TBY8 1022 aa25.69■■□□□ 1.7
MSLN-205ENST00000563941 KIF13AQ9H1H9 1805 aa25.68■■□□□ 1.7
MSLN-205ENST00000563941 RIMS2Q9UQ26 1411 aa25.68■■□□□ 1.7
MSLN-205ENST00000563941 CT47B1P0C2W7 299 aaPredicted RBP25.67■■□□□ 1.7
MSLN-205ENST00000563941 TSR2Q969E8 191 aaKnown RBP25.67■■□□□ 1.7
MSLN-205ENST00000563941 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
MSLN-205ENST00000563941 TRIM35Q9UPQ4 493 aa25.67■■□□□ 1.7
MSLN-205ENST00000563941 PNPLA6Q8IY17 1366 aa25.67■■□□□ 1.7
MSLN-205ENST00000563941 PPM1GO15355 546 aaPredicted RBP25.66■■□□□ 1.7
MSLN-205ENST00000563941 DIAPH1O60610 1272 aaKnown RBP25.66■■□□□ 1.7
MSLN-205ENST00000563941 PCDHB15Q9Y5E8 787 aa25.66■■□□□ 1.7
MSLN-205ENST00000563941 WAPLQ7Z5K2 1190 aa25.64■■□□□ 1.7
MSLN-205ENST00000563941 ATP7BP35670 1465 aa25.64■■□□□ 1.7
MSLN-205ENST00000563941 ZKSCAN2Q63HK3 967 aa25.64■■□□□ 1.69
MSLN-205ENST00000563941 NEFMP07197 916 aa25.63■■□□□ 1.69
MSLN-205ENST00000563941 EXOSC9Q06265 439 aaKnown RBP25.63■■□□□ 1.69
MSLN-205ENST00000563941 MVPQ14764 893 aaKnown RBP25.62■■□□□ 1.69
MSLN-205ENST00000563941 IL16Q14005 1332 aa25.62■■□□□ 1.69
MSLN-205ENST00000563941 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
MSLN-205ENST00000563941 SLC4A3P48751 1232 aa25.61■■□□□ 1.69
MSLN-205ENST00000563941 MLECQ14165 292 aa25.61■■□□□ 1.69
MSLN-205ENST00000563941 PNNQ9H307 717 aaKnown RBP25.61■■□□□ 1.69
MSLN-205ENST00000563941 USP35Q9P2H5 1018 aa25.61■■□□□ 1.69
MSLN-205ENST00000563941 DAXXQ9UER7 740 aaPredicted RBP25.61■■□□□ 1.69
MSLN-205ENST00000563941 RIPK4P57078 832 aa25.6■■□□□ 1.69
MSLN-205ENST00000563941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
MSLN-205ENST00000563941 SMC4Q9NTJ3 1288 aa25.6■■□□□ 1.69
MSLN-205ENST00000563941 NRXN3Q9Y4C0 1643 aa25.6■■□□□ 1.69
MSLN-205ENST00000563941 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
MSLN-205ENST00000563941 DZIP1LQ8IYY4 767 aaKnown RBP25.59■■□□□ 1.69
MSLN-205ENST00000563941 LRRC7Q96NW7 1537 aa25.59■■□□□ 1.69
MSLN-205ENST00000563941 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
MSLN-205ENST00000563941 FCHSD2O94868 740 aa25.55■■□□□ 1.68
MSLN-205ENST00000563941 SSH1Q8WYL5 1049 aa25.55■■□□□ 1.68
MSLN-205ENST00000563941 POLKQ9UBT6 870 aa25.55■■□□□ 1.68
MSLN-205ENST00000563941 MAP2P11137 1827 aaKnown RBP25.55■■□□□ 1.68
MSLN-205ENST00000563941 PDZRN3Q9UPQ7 1066 aa25.55■■□□□ 1.68
MSLN-205ENST00000563941 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
MSLN-205ENST00000563941 USP19O94966 1318 aa25.54■■□□□ 1.68
MSLN-205ENST00000563941 FAM135BQ49AJ0 1406 aa25.53■■□□□ 1.68
MSLN-205ENST00000563941 TRIM27P14373 513 aa25.53■■□□□ 1.68
MSLN-205ENST00000563941 FBLN1P23142 703 aa25.52■■□□□ 1.68
MSLN-205ENST00000563941 CPSF1Q10570 1443 aaKnown RBP25.52■■□□□ 1.68
MSLN-205ENST00000563941 METP08581 1390 aa25.52■■□□□ 1.68
MSLN-205ENST00000563941 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.52■■□□□ 1.68
MSLN-205ENST00000563941 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
MSLN-205ENST00000563941 EDC4Q6P2E9 1401 aaKnown RBP25.52■■□□□ 1.68
MSLN-205ENST00000563941 PPIP5K1Q6PFW1 1433 aa25.52■■□□□ 1.68
MSLN-205ENST00000563941 WASLO00401 505 aaPredicted RBP25.51■■□□□ 1.67
MSLN-205ENST00000563941 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
MSLN-205ENST00000563941 SEC24BO95487 1268 aa25.5■■□□□ 1.67
MSLN-205ENST00000563941 ATF7IPQ6VMQ6 1270 aa25.5■■□□□ 1.67
MSLN-205ENST00000563941 KNDC1Q76NI1 1749 aa25.5■■□□□ 1.67
MSLN-205ENST00000563941 NOB1Q9ULX3 412 aaKnown RBP25.49■■□□□ 1.67
MSLN-205ENST00000563941 DDX19BQ9UMR2 479 aa25.48■■□□□ 1.67
MSLN-205ENST00000563941 ITPRIPQ8IWB1 547 aa25.47■■□□□ 1.67
MSLN-205ENST00000563941 TXNDC2Q86VQ3 553 aa25.46■■□□□ 1.67
MSLN-205ENST00000563941 NME9Q86XW9 330 aa25.46■■□□□ 1.67
MSLN-205ENST00000563941 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
MSLN-205ENST00000563941 KIF16BQ96L93 1317 aa25.46■■□□□ 1.67
MSLN-205ENST00000563941 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
MSLN-205ENST00000563941 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
MSLN-205ENST00000563941 CDK12Q9NYV4 1490 aaPredicted RBP25.44■■□□□ 1.66
MSLN-205ENST00000563941 TECPR2O15040 1411 aa25.44■■□□□ 1.66
MSLN-205ENST00000563941 HMOX1P09601 288 aa25.43■■□□□ 1.66
MSLN-205ENST00000563941 NFKBIBQ15653 356 aa25.43■■□□□ 1.66
MSLN-205ENST00000563941 NFE2L2Q16236 605 aa25.43■■□□□ 1.66
MSLN-205ENST00000563941 ALDH1L2Q3SY69 923 aa25.43■■□□□ 1.66
MSLN-205ENST00000563941 NUDT16Q96DE0 195 aaKnown RBP25.43■■□□□ 1.66
MSLN-205ENST00000563941 CPS1P31327 1500 aa25.43■■□□□ 1.66
MSLN-205ENST00000563941 HDAC1Q13547 482 aaPredicted RBP25.43■■□□□ 1.66
MSLN-205ENST00000563941 IPO8O15397 1037 aaKnown RBP25.42■■□□□ 1.66
MSLN-205ENST00000563941 TMEM57Q8N5G2 664 aa25.42■■□□□ 1.66
MSLN-205ENST00000563941 PHACTR3Q96KR7 559 aa25.42■■□□□ 1.66
MSLN-205ENST00000563941 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
MSLN-205ENST00000563941 IL13P35225 146 aa25.42■■□□□ 1.66
MSLN-205ENST00000563941 ZRANB1Q9UGI0 708 aa25.42■■□□□ 1.66
MSLN-205ENST00000563941 AKAP12Q02952 1782 aa25.41■■□□□ 1.66
MSLN-205ENST00000563941 SIRT1Q96EB6 747 aa25.41■■□□□ 1.66
MSLN-205ENST00000563941 ITSN1Q15811 1721 aa25.41■■□□□ 1.66
MSLN-205ENST00000563941 HDGFP51858 240 aaKnown RBP25.4■■□□□ 1.66
MSLN-205ENST00000563941 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
MSLN-205ENST00000563941 CCDC61Q9Y6R9 512 aa25.4■■□□□ 1.66
MSLN-205ENST00000563941 TNRQ92752 1358 aa25.39■■□□□ 1.66
MSLN-205ENST00000563941 C3P01024 1663 aa25.38■■□□□ 1.65
MSLN-205ENST00000563941 ZNF428Q96B54 188 aa25.38■■□□□ 1.65
MSLN-205ENST00000563941 COG3Q96JB2 828 aa25.38■■□□□ 1.65
MSLN-205ENST00000563941 UPF2Q9HAU5 1272 aaKnown RBP25.37■■□□□ 1.65
MSLN-205ENST00000563941 ZBTB40Q9NUA8 1239 aa25.37■■□□□ 1.65
MSLN-205ENST00000563941 UBR1Q8IWV7 1749 aa25.37■■□□□ 1.65
MSLN-205ENST00000563941 CALD1Q05682 793 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms