RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 SLF2Q8IX21 1173 aa7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 ZC3H15Q8WU90 426 aaKnown RBP7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 GCC2Q8IWJ2 1684 aa7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 ADAMTS12P58397 1594 aa7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 KIF7Q2M1P5 1343 aa7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 C11orf95C9JLR9 678 aaPredicted RBP7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 SLC10A3P09131 477 aa7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
AC009117.3-202ENST00000563825 KTN1Q86UP2 1357 aaKnown RBP7.6□□□□□ -1.19
AC009117.3-202ENST00000563825 ADGRL2O95490 1459 aa7.6□□□□□ -1.19
AC009117.3-202ENST00000563825 TEX14Q8IWB6 1497 aa7.6□□□□□ -1.19
AC009117.3-202ENST00000563825 CDK13Q14004 1512 aaKnown RBP7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 DISP1Q96F81 1524 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 IRF6O14896 467 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 KCNC4Q03721 635 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 RSPH4AQ5TD94 716 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 NUP153P49790 1475 aaKnown RBP7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 CARMIL2Q6F5E8 1435 aa7.59□□□□□ -1.19
AC009117.3-202ENST00000563825 RNF123Q5XPI4 1314 aa7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 ZMYND10O75800 440 aa7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 FAM9BQ8IZU0 186 aa7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 DNMT1P26358 1616 aaKnown RBP7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 UHRF1BP1Q6BDS2 1440 aa7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
AC009117.3-202ENST00000563825 ZNF644Q9H582 1327 aaPredicted RBP7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 TSPY4P0CV99 314 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 TSPY10P0CW01 314 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 RALBP1Q15311 655 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 CHMP7Q8WUX9 453 aaPredicted RBP7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 MTRQ99707 1265 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 DAXXQ9UER7 740 aaPredicted RBP7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 NUDCQ9Y266 331 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 LRRIQ1Q96JM4 1722 aa7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 GPATCH8Q9UKJ3 1502 aaKnown RBP7.57□□□□□ -1.2
AC009117.3-202ENST00000563825 PZPP20742 1482 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 GRIN2AQ12879 1464 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 MAGI1Q96QZ7 1491 aaPredicted RBP7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 MINK1Q8N4C8 1332 aaPredicted RBP7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 MAP2K5Q13163 448 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 USP47Q96K76 1375 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 KIAA0556O60303 1618 aa7.56□□□□□ -1.2
AC009117.3-202ENST00000563825 PRG4Q92954 1404 aaPredicted RBP7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 KDM6BO15054 1643 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 MBD5Q9P267 1494 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 SHANK2Q9UPX8 1470 aa7.55□□□□□ -1.2
AC009117.3-202ENST00000563825 ANKRD50Q9ULJ7 1429 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 RAPGEF6Q8TEU7 1601 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 ARID3CA6NKF2 412 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 SLC4A3P48751 1232 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 COPS2P61201 443 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 Q6ZNB5 142 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 PNISRQ8TF01 805 aaKnown RBP7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 IL21Q9HBE4 155 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 BRD4O60885 1362 aaPredicted RBP7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 KIF15Q9NS87 1388 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 PBRM1Q86U86 1689 aa7.54□□□□□ -1.2
AC009117.3-202ENST00000563825 WASHC2CQ9Y4E1 1318 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 PDE3BQ13370 1112 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 CARD11Q9BXL7 1154 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 NUP155O75694 1391 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 INSRP06213 1382 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 SYNJ2O15056 1496 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 CAMSAP2Q08AD1 1489 aa7.53□□□□□ -1.2
AC009117.3-202ENST00000563825 ARHGEF12Q9NZN5 1544 aa7.52□□□□□ -1.2
AC009117.3-202ENST00000563825 ZNF608Q9ULD9 1512 aaPredicted RBP7.52□□□□□ -1.2
AC009117.3-202ENST00000563825 RALGAPBQ86X10 1494 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 DDX11L8A8MPP1 907 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 ACTN4O43707 911 aaKnown RBP7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 CFHP08603 1231 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 IRX6P78412 446 aaPredicted RBP7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 CCDC102AQ96A19 550 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 NUP160Q12769 1436 aa7.52□□□□□ -1.21
AC009117.3-202ENST00000563825 KRI1Q8N9T8 703 aaKnown RBP7.51□□□□□ -1.21
AC009117.3-202ENST00000563825 PCDHB3Q9Y5E6 796 aa7.51□□□□□ -1.21
AC009117.3-202ENST00000563825 PTPRGP23470 1445 aa7.51□□□□□ -1.21
AC009117.3-202ENST00000563825 MYBBP1AQ9BQG0 1328 aaKnown RBP7.51□□□□□ -1.21
AC009117.3-202ENST00000563825 ZPR1O75312 459 aa7.5□□□□□ -1.21
AC009117.3-202ENST00000563825 B4GALNT3Q6L9W6 998 aa7.5□□□□□ -1.21
AC009117.3-202ENST00000563825 KDM5DQ9BY66 1539 aa7.5□□□□□ -1.21
AC009117.3-202ENST00000563825 C9orf84Q5VXU9 1444 aa7.5□□□□□ -1.21
AC009117.3-202ENST00000563825 LRPPRCP42704 1394 aaKnown RBP7.49□□□□□ -1.21
AC009117.3-202ENST00000563825 GCGRP47871 477 aa7.49□□□□□ -1.21
AC009117.3-202ENST00000563825 MDM2Q00987 491 aaPredicted RBP7.49□□□□□ -1.21
AC009117.3-202ENST00000563825 KMT5BQ4FZB7 885 aa7.49□□□□□ -1.21
AC009117.3-202ENST00000563825 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
AC009117.3-202ENST00000563825 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms