RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
AC009163.3-201ENST00000563554 MED1Q15648 1581 aaPredicted RBP19.64■□□□□ 0.73
AC009163.3-201ENST00000563554 USP6P35125 1406 aa19.63■□□□□ 0.73
AC009163.3-201ENST00000563554 PLEKHG3A1L390 1219 aa19.63■□□□□ 0.73
AC009163.3-201ENST00000563554 KRT28Q7Z3Y7 464 aa19.63■□□□□ 0.73
AC009163.3-201ENST00000563554 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
AC009163.3-201ENST00000563554 SBNO1A3KN83 1393 aa19.62■□□□□ 0.73
AC009163.3-201ENST00000563554 PNPLA6Q8IY17 1366 aa19.61■□□□□ 0.73
AC009163.3-201ENST00000563554 LRRC59Q96AG4 307 aaKnown RBP19.61■□□□□ 0.73
AC009163.3-201ENST00000563554 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
AC009163.3-201ENST00000563554 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
AC009163.3-201ENST00000563554 LTN1O94822 1766 aa19.6■□□□□ 0.73
AC009163.3-201ENST00000563554 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
AC009163.3-201ENST00000563554 KTN1Q86UP2 1357 aaKnown RBP19.59■□□□□ 0.73
AC009163.3-201ENST00000563554 PLCH1Q4KWH8 1693 aa19.59■□□□□ 0.73
AC009163.3-201ENST00000563554 SPATA31A3Q5VYP0 1347 aa19.58■□□□□ 0.73
AC009163.3-201ENST00000563554 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
AC009163.3-201ENST00000563554 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
AC009163.3-201ENST00000563554 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
AC009163.3-201ENST00000563554 SLC12A5Q9H2X9 1139 aa19.57■□□□□ 0.72
AC009163.3-201ENST00000563554 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
AC009163.3-201ENST00000563554 LRP6O75581 1613 aa19.56■□□□□ 0.72
AC009163.3-201ENST00000563554 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
AC009163.3-201ENST00000563554 KIF7Q2M1P5 1343 aa19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 LMOD2Q6P5Q4 547 aa19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 SSH2Q76I76 1423 aa19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
AC009163.3-201ENST00000563554 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
AC009163.3-201ENST00000563554 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
AC009163.3-201ENST00000563554 ZNF692Q9BU19 519 aaPredicted RBP19.53■□□□□ 0.72
AC009163.3-201ENST00000563554 NWD2Q9ULI1 1742 aa19.52■□□□□ 0.72
AC009163.3-201ENST00000563554 CCDC7Q96M83 1385 aa19.52■□□□□ 0.72
AC009163.3-201ENST00000563554 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
AC009163.3-201ENST00000563554 COL14A1Q05707 1796 aaKnown RBP19.5■□□□□ 0.71
AC009163.3-201ENST00000563554 SLIT3O75094 1523 aa19.5■□□□□ 0.71
AC009163.3-201ENST00000563554 TTC21AQ8NDW8 1320 aa19.5■□□□□ 0.71
AC009163.3-201ENST00000563554 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
AC009163.3-201ENST00000563554 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
AC009163.3-201ENST00000563554 NSD3Q9BZ95 1437 aa19.49■□□□□ 0.71
AC009163.3-201ENST00000563554 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
AC009163.3-201ENST00000563554 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
AC009163.3-201ENST00000563554 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
AC009163.3-201ENST00000563554 NUTM2AQ8IVF1 878 aaPredicted RBP19.48■□□□□ 0.71
AC009163.3-201ENST00000563554 NRAPQ86VF7 1730 aa19.48■□□□□ 0.71
AC009163.3-201ENST00000563554 ABTB2Q8N961 1025 aa19.47■□□□□ 0.71
AC009163.3-201ENST00000563554 CARD14Q9BXL6 1004 aa19.47■□□□□ 0.71
AC009163.3-201ENST00000563554 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
AC009163.3-201ENST00000563554 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
AC009163.3-201ENST00000563554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.46■□□□□ 0.71
AC009163.3-201ENST00000563554 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
AC009163.3-201ENST00000563554 CABLES1Q8TDN4 633 aa19.44■□□□□ 0.7
AC009163.3-201ENST00000563554 OVOS2A0A0J9YW53 1432 aa19.43■□□□□ 0.7
AC009163.3-201ENST00000563554 OVOS2Q6IE36 1432 aa19.43■□□□□ 0.7
AC009163.3-201ENST00000563554 NFAT5O94916 1531 aa19.43■□□□□ 0.7
AC009163.3-201ENST00000563554 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
AC009163.3-201ENST00000563554 COL18A1P39060 1754 aa19.42■□□□□ 0.7
AC009163.3-201ENST00000563554 NLRP6P59044 892 aa19.42■□□□□ 0.7
AC009163.3-201ENST00000563554 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
AC009163.3-201ENST00000563554 NME9Q86XW9 330 aa19.42■□□□□ 0.7
AC009163.3-201ENST00000563554 USP19O94966 1318 aa19.42■□□□□ 0.7
AC009163.3-201ENST00000563554 ADAMTS2O95450 1211 aa19.41■□□□□ 0.7
AC009163.3-201ENST00000563554 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
AC009163.3-201ENST00000563554 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
AC009163.3-201ENST00000563554 PANK3Q9H999 370 aa19.39■□□□□ 0.69
AC009163.3-201ENST00000563554 WNK3Q9BYP7 1800 aa19.39■□□□□ 0.69
AC009163.3-201ENST00000563554 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
AC009163.3-201ENST00000563554 FAM208AQ9UK61 1670 aaKnown RBP19.37■□□□□ 0.69
AC009163.3-201ENST00000563554 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
AC009163.3-201ENST00000563554 CGNL1Q0VF96 1302 aa19.36■□□□□ 0.69
AC009163.3-201ENST00000563554 C8orf37Q96NL8 207 aa19.36■□□□□ 0.69
AC009163.3-201ENST00000563554 ABCC6O95255 1503 aa19.35■□□□□ 0.69
AC009163.3-201ENST00000563554 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
AC009163.3-201ENST00000563554 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
AC009163.3-201ENST00000563554 SOX12O15370 315 aa19.34■□□□□ 0.69
AC009163.3-201ENST00000563554 COG3Q96JB2 828 aa19.34■□□□□ 0.69
AC009163.3-201ENST00000563554 GGNBP2Q9H3C7 697 aa19.34■□□□□ 0.69
AC009163.3-201ENST00000563554 NSD2O96028 1365 aa19.33■□□□□ 0.69
AC009163.3-201ENST00000563554 SLIT2O94813 1529 aa19.33■□□□□ 0.68
AC009163.3-201ENST00000563554 CPDO75976 1380 aa19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 FYB1O15117 783 aa19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 GCP02774 474 aa19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 ZC3H6P61129 1189 aaKnown RBP19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
AC009163.3-201ENST00000563554 AFF2P51816 1311 aa19.31■□□□□ 0.68
AC009163.3-201ENST00000563554 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
AC009163.3-201ENST00000563554 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
AC009163.3-201ENST00000563554 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
AC009163.3-201ENST00000563554 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
AC009163.3-201ENST00000563554 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
AC009163.3-201ENST00000563554 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
AC009163.3-201ENST00000563554 BRWD3Q6RI45 1802 aa19.27■□□□□ 0.68
AC009163.3-201ENST00000563554 BCL9LQ86UU0 1499 aa19.27■□□□□ 0.67
AC009163.3-201ENST00000563554 GLI3P10071 1580 aa19.26■□□□□ 0.67
AC009163.3-201ENST00000563554 COL5A2P05997 1499 aaPredicted RBP19.25■□□□□ 0.67
AC009163.3-201ENST00000563554 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
AC009163.3-201ENST00000563554 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms