RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 UPF2Q9HAU5 1272 aaKnown RBP17.7■□□□□ 0.42
GTF3C1-203ENST00000562609 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
GTF3C1-203ENST00000562609 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
GTF3C1-203ENST00000562609 IGHDP01880 384 aa17.69■□□□□ 0.42
GTF3C1-203ENST00000562609 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
GTF3C1-203ENST00000562609 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
GTF3C1-203ENST00000562609 MAP7D2Q96T17 732 aa17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 MTHFSP49914 203 aa17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 TBC1D32Q96NH3 1257 aa17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 ZHX1Q9UKY1 873 aaPredicted RBP17.67■□□□□ 0.42
GTF3C1-203ENST00000562609 OFD1O75665 1012 aa17.66■□□□□ 0.42
GTF3C1-203ENST00000562609 ARID3AQ99856 593 aa17.66■□□□□ 0.42
GTF3C1-203ENST00000562609 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
GTF3C1-203ENST00000562609 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
GTF3C1-203ENST00000562609 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
GTF3C1-203ENST00000562609 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 SMAP1Q8IYB5 467 aaPredicted RBP17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
GTF3C1-203ENST00000562609 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
GTF3C1-203ENST00000562609 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
GTF3C1-203ENST00000562609 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
GTF3C1-203ENST00000562609 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
GTF3C1-203ENST00000562609 PTPRMP28827 1452 aa17.63■□□□□ 0.41
GTF3C1-203ENST00000562609 AGLP35573 1532 aa17.63■□□□□ 0.41
GTF3C1-203ENST00000562609 ZSCAN30Q86W11 494 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 INSRP06213 1382 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 A2ML1A8K2U0 1454 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 ALKQ9UM73 1620 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 ZNF521Q96K83 1311 aa17.62■□□□□ 0.41
GTF3C1-203ENST00000562609 ANKRD36BQ8N2N9 1353 aa17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 R3HCC1Q9Y3T6 440 aaKnown RBP17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 RIMS2Q9UQ26 1411 aa17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 TERF1P54274 439 aa17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
GTF3C1-203ENST00000562609 MSNP26038 577 aaKnown RBP17.6■□□□□ 0.41
GTF3C1-203ENST00000562609 FBLN1P23142 703 aa17.59■□□□□ 0.41
GTF3C1-203ENST00000562609 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
GTF3C1-203ENST00000562609 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
GTF3C1-203ENST00000562609 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.41
GTF3C1-203ENST00000562609 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.4
GTF3C1-203ENST00000562609 SLFN5Q08AF3 891 aa17.58■□□□□ 0.4
GTF3C1-203ENST00000562609 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
GTF3C1-203ENST00000562609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
GTF3C1-203ENST00000562609 BCAR3O75815 825 aa17.57■□□□□ 0.4
GTF3C1-203ENST00000562609 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
GTF3C1-203ENST00000562609 NCKAP5LQ9HCH0 1330 aa17.56■□□□□ 0.4
GTF3C1-203ENST00000562609 FYB1O15117 783 aa17.56■□□□□ 0.4
GTF3C1-203ENST00000562609 BBXQ8WY36 941 aaPredicted RBP17.56■□□□□ 0.4
GTF3C1-203ENST00000562609 METP08581 1390 aa17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 UQCRHLA0A096LP55 91 aa17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 UQCRHP07919 91 aa17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 PPP1R9BQ96SB3 815 aa17.55■□□□□ 0.4
GTF3C1-203ENST00000562609 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
GTF3C1-203ENST00000562609 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
GTF3C1-203ENST00000562609 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
GTF3C1-203ENST00000562609 NASPP49321 788 aaPredicted RBP17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 U2SURPO15042 1029 aaKnown RBP17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 CLUAP1Q96AJ1 413 aa17.53■□□□□ 0.4
GTF3C1-203ENST00000562609 MTERF4Q7Z6M4 381 aaKnown RBP17.52■□□□□ 0.4
GTF3C1-203ENST00000562609 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
GTF3C1-203ENST00000562609 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.39
GTF3C1-203ENST00000562609 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 CD163L1Q9NR16 1453 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 SHPRHQ149N8 1683 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 DMTNQ08495 405 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
GTF3C1-203ENST00000562609 TNRQ92752 1358 aa17.5■□□□□ 0.39
GTF3C1-203ENST00000562609 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
GTF3C1-203ENST00000562609 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-203ENST00000562609 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-203ENST00000562609 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
GTF3C1-203ENST00000562609 COG6Q9Y2V7 657 aa17.49■□□□□ 0.39
GTF3C1-203ENST00000562609 E9PSI1 815 aa17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 GTF2E1P29083 439 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 LTKP29376 864 aa17.48■□□□□ 0.39
GTF3C1-203ENST00000562609 SKOR2Q2VWA4 1001 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms