RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 ATP7AQ04656 1500 aa12.43□□□□□ -0.42
TCF4-211ENST00000561992 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
TCF4-211ENST00000561992 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
TCF4-211ENST00000561992 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
TCF4-211ENST00000561992 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
TCF4-211ENST00000561992 ADGRB3O60242 1522 aa12.42□□□□□ -0.42
TCF4-211ENST00000561992 TPM2P07951 284 aa12.42□□□□□ -0.42
TCF4-211ENST00000561992 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
TCF4-211ENST00000561992 ESPNB1AK53 854 aa12.42□□□□□ -0.42
TCF4-211ENST00000561992 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
TCF4-211ENST00000561992 MROH1Q8NDA8 1641 aa12.41□□□□□ -0.42
TCF4-211ENST00000561992 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.42
TCF4-211ENST00000561992 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
TCF4-211ENST00000561992 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
TCF4-211ENST00000561992 CLEC17AQ6ZS10 378 aa12.4□□□□□ -0.42
TCF4-211ENST00000561992 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
TCF4-211ENST00000561992 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 ATF7IPQ6VMQ6 1270 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 TERF1P54274 439 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
TCF4-211ENST00000561992 NOS1P29475 1434 aa12.38□□□□□ -0.43
TCF4-211ENST00000561992 ABCA9Q8IUA7 1624 aa12.38□□□□□ -0.43
TCF4-211ENST00000561992 MTHFSP49914 203 aa12.38□□□□□ -0.43
TCF4-211ENST00000561992 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
TCF4-211ENST00000561992 NUCB1Q02818 461 aa12.38□□□□□ -0.43
TCF4-211ENST00000561992 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
TCF4-211ENST00000561992 CCDC173Q0VFZ6 552 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 C14orf93Q9H972 538 aaKnown RBP12.37□□□□□ -0.43
TCF4-211ENST00000561992 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
TCF4-211ENST00000561992 MED14O60244 1454 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 GOLGA6L22H0YM25 854 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
TCF4-211ENST00000561992 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 TNNQ9UQP3 1299 aa12.37□□□□□ -0.43
TCF4-211ENST00000561992 MROH2AA6NES4 1674 aa12.36□□□□□ -0.43
TCF4-211ENST00000561992 TRIM27P14373 513 aa12.36□□□□□ -0.43
TCF4-211ENST00000561992 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
TCF4-211ENST00000561992 PPRC1Q5VV67 1664 aaKnown RBP12.36□□□□□ -0.43
TCF4-211ENST00000561992 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
TCF4-211ENST00000561992 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
TCF4-211ENST00000561992 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
TCF4-211ENST00000561992 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
TCF4-211ENST00000561992 PPLO60437 1756 aa12.35□□□□□ -0.43
TCF4-211ENST00000561992 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
TCF4-211ENST00000561992 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
TCF4-211ENST00000561992 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
TCF4-211ENST00000561992 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
TCF4-211ENST00000561992 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
TCF4-211ENST00000561992 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
TCF4-211ENST00000561992 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
TCF4-211ENST00000561992 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
TCF4-211ENST00000561992 UGGT1Q9NYU2 1555 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 KIF3BO15066 747 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
TCF4-211ENST00000561992 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
TCF4-211ENST00000561992 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
TCF4-211ENST00000561992 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
TCF4-211ENST00000561992 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
TCF4-211ENST00000561992 TMPOP42166 694 aaKnown RBP12.32□□□□□ -0.44
TCF4-211ENST00000561992 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
TCF4-211ENST00000561992 AFAP1Q8N556 730 aa12.32□□□□□ -0.44
TCF4-211ENST00000561992 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
TCF4-211ENST00000561992 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
TCF4-211ENST00000561992 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
TCF4-211ENST00000561992 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
TCF4-211ENST00000561992 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
TCF4-211ENST00000561992 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
TCF4-211ENST00000561992 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
TCF4-211ENST00000561992 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
TCF4-211ENST00000561992 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 GLI2P10070 1586 aa12.3□□□□□ -0.44
TCF4-211ENST00000561992 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 ZNF445P59923 1031 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 CALD1Q05682 793 aaKnown RBP12.29□□□□□ -0.44
TCF4-211ENST00000561992 NUCB2P80303 420 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 KIF2CQ99661 725 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 ERCC6L2Q5T890 1561 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
TCF4-211ENST00000561992 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms