RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 METP08581 1390 aa9.87□□□□□ -0.83
USP8-213ENST00000560885 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
USP8-213ENST00000560885 RGS12O14924 1447 aa9.86□□□□□ -0.83
USP8-213ENST00000560885 C8orf37Q96NL8 207 aa9.86□□□□□ -0.83
USP8-213ENST00000560885 NEXMIFQ5QGS0 1516 aa9.86□□□□□ -0.83
USP8-213ENST00000560885 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
USP8-213ENST00000560885 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
USP8-213ENST00000560885 NGLY1Q96IV0 654 aa9.85□□□□□ -0.83
USP8-213ENST00000560885 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
USP8-213ENST00000560885 COL22A1Q8NFW1 1626 aaPredicted RBP9.84□□□□□ -0.83
USP8-213ENST00000560885 C1orf167Q5SNV9 1468 aa9.84□□□□□ -0.83
USP8-213ENST00000560885 DDX17Q92841 729 aaKnown RBP9.83□□□□□ -0.84
USP8-213ENST00000560885 PTCH1Q13635 1447 aa9.82□□□□□ -0.84
USP8-213ENST00000560885 ATAD2Q6PL18 1390 aa9.82□□□□□ -0.84
USP8-213ENST00000560885 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
USP8-213ENST00000560885 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
USP8-213ENST00000560885 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
USP8-213ENST00000560885 PPLO60437 1756 aa9.8□□□□□ -0.84
USP8-213ENST00000560885 ADAMTS2O95450 1211 aa9.8□□□□□ -0.84
USP8-213ENST00000560885 ITGAEP38570 1179 aa9.8□□□□□ -0.84
USP8-213ENST00000560885 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
USP8-213ENST00000560885 USP21Q9UK80 565 aa9.8□□□□□ -0.84
USP8-213ENST00000560885 TRPC5Q9UL62 973 aaPredicted RBP9.8□□□□□ -0.84
USP8-213ENST00000560885 VGFO15240 615 aaPredicted RBP9.79□□□□□ -0.84
USP8-213ENST00000560885 FNBP4Q8N3X1 1017 aaPredicted RBP9.79□□□□□ -0.84
USP8-213ENST00000560885 MARVELD3Q96A59 401 aa9.79□□□□□ -0.84
USP8-213ENST00000560885 ORAI2Q96SN7 254 aa9.79□□□□□ -0.84
USP8-213ENST00000560885 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
USP8-213ENST00000560885 EMP3P54852 163 aa9.78□□□□□ -0.84
USP8-213ENST00000560885 HFM1A2PYH4 1435 aa9.78□□□□□ -0.84
USP8-213ENST00000560885 ATRNO75882 1429 aa9.78□□□□□ -0.84
USP8-213ENST00000560885 CDC42BPGQ6DT37 1551 aa9.78□□□□□ -0.84
USP8-213ENST00000560885 ROBO2Q9HCK4 1378 aa9.77□□□□□ -0.84
USP8-213ENST00000560885 PYGBP11216 843 aa9.77□□□□□ -0.85
USP8-213ENST00000560885 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
USP8-213ENST00000560885 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
USP8-213ENST00000560885 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
USP8-213ENST00000560885 RPGRIP1LQ68CZ1 1315 aa9.77□□□□□ -0.85
USP8-213ENST00000560885 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
USP8-213ENST00000560885 MYOM2P54296 1465 aa9.76□□□□□ -0.85
USP8-213ENST00000560885 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
USP8-213ENST00000560885 BCL9LQ86UU0 1499 aa9.75□□□□□ -0.85
USP8-213ENST00000560885 PXDNQ92626 1479 aa9.75□□□□□ -0.85
USP8-213ENST00000560885 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
USP8-213ENST00000560885 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
USP8-213ENST00000560885 BRWD3Q6RI45 1802 aa9.74□□□□□ -0.85
USP8-213ENST00000560885 NAIPQ13075 1403 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 GOLGA2Q08379 1002 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 ESCO1Q5FWF5 840 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 KIF1AQ12756 1690 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 LRPPRCP42704 1394 aaKnown RBP9.73□□□□□ -0.85
USP8-213ENST00000560885 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 IFT172Q9UG01 1749 aa9.73□□□□□ -0.85
USP8-213ENST00000560885 GJD4Q96KN9 370 aaPredicted RBP9.72□□□□□ -0.85
USP8-213ENST00000560885 FMN2Q9NZ56 1722 aa9.72□□□□□ -0.85
USP8-213ENST00000560885 GLI3P10071 1580 aa9.71□□□□□ -0.85
USP8-213ENST00000560885 FOXO3O43524 673 aa9.71□□□□□ -0.86
USP8-213ENST00000560885 GSE1Q14687 1217 aa9.71□□□□□ -0.86
USP8-213ENST00000560885 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
USP8-213ENST00000560885 TECPR2O15040 1411 aa9.71□□□□□ -0.86
USP8-213ENST00000560885 USP32Q8NFA0 1604 aa9.71□□□□□ -0.86
USP8-213ENST00000560885 NWD2Q9ULI1 1742 aa9.7□□□□□ -0.86
USP8-213ENST00000560885 RGPD8O14715 1765 aaPredicted RBP9.7□□□□□ -0.86
USP8-213ENST00000560885 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
USP8-213ENST00000560885 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
USP8-213ENST00000560885 BLMP54132 1417 aaPredicted RBP9.7□□□□□ -0.86
USP8-213ENST00000560885 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
USP8-213ENST00000560885 SLIT2O94813 1529 aa9.7□□□□□ -0.86
USP8-213ENST00000560885 PLCH1Q4KWH8 1693 aa9.69□□□□□ -0.86
USP8-213ENST00000560885 RALGAPBQ86X10 1494 aa9.69□□□□□ -0.86
USP8-213ENST00000560885 FBXO3Q9UK99 471 aa9.69□□□□□ -0.86
USP8-213ENST00000560885 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
USP8-213ENST00000560885 CCDC144AA2RUR9 1427 aa9.68□□□□□ -0.86
USP8-213ENST00000560885 SPATA31A3Q5VYP0 1347 aa9.68□□□□□ -0.86
USP8-213ENST00000560885 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
USP8-213ENST00000560885 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
USP8-213ENST00000560885 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
USP8-213ENST00000560885 UNC5CLQ8IV45 518 aa9.68□□□□□ -0.86
USP8-213ENST00000560885 LRP5O75197 1615 aa9.67□□□□□ -0.86
USP8-213ENST00000560885 ABCC11Q96J66 1382 aa9.67□□□□□ -0.86
USP8-213ENST00000560885 ANKRD30BQ9BXX2 1392 aa9.67□□□□□ -0.86
USP8-213ENST00000560885 WAPLQ7Z5K2 1190 aa9.66□□□□□ -0.86
USP8-213ENST00000560885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.66□□□□□ -0.865e-8■■■■■ 37.3
USP8-213ENST00000560885 ADGRF5Q8IZF2 1346 aa9.65□□□□□ -0.86
USP8-213ENST00000560885 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
USP8-213ENST00000560885 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
USP8-213ENST00000560885 SF3B2Q13435 895 aaKnown RBP9.65□□□□□ -0.86
USP8-213ENST00000560885 KRT28Q7Z3Y7 464 aa9.65□□□□□ -0.86
USP8-213ENST00000560885 STK26Q9P289 416 aa9.65□□□□□ -0.86
USP8-213ENST00000560885 PIK3C2GO75747 1445 aa9.65□□□□□ -0.87
USP8-213ENST00000560885 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.87
USP8-213ENST00000560885 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.87
USP8-213ENST00000560885 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
USP8-213ENST00000560885 PSME1Q06323 249 aa9.64□□□□□ -0.87
USP8-213ENST00000560885 VPS72Q15906 364 aa9.64□□□□□ -0.87
USP8-213ENST00000560885 SIRT1Q96EB6 747 aa9.64□□□□□ -0.87
USP8-213ENST00000560885 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
USP8-213ENST00000560885 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
USP8-213ENST00000560885 RGPD1P0DJD0 1748 aa9.63□□□□□ -0.87
USP8-213ENST00000560885 HAP1P54257 671 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms