RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 UTP14CQ5TAP6 766 aaKnown RBP20.02■□□□□ 0.79
PBX1-219ENST00000560641 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
PBX1-219ENST00000560641 ABCC11Q96J66 1382 aa20■□□□□ 0.79
PBX1-219ENST00000560641 JPH4Q96JJ6 628 aa20■□□□□ 0.79
PBX1-219ENST00000560641 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
PBX1-219ENST00000560641 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
PBX1-219ENST00000560641 ABCC1P33527 1531 aa19.98■□□□□ 0.79
PBX1-219ENST00000560641 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
PBX1-219ENST00000560641 KIF1BO60333 1816 aa19.98■□□□□ 0.79
PBX1-219ENST00000560641 BAG4O95429 457 aaKnown RBP19.97■□□□□ 0.79
PBX1-219ENST00000560641 IL16Q14005 1332 aa19.97■□□□□ 0.79
PBX1-219ENST00000560641 ZKSCAN5Q9Y2L8 839 aa19.97■□□□□ 0.79
PBX1-219ENST00000560641 NSD2O96028 1365 aa19.97■□□□□ 0.79
PBX1-219ENST00000560641 QRICH2Q9H0J4 1663 aa19.96■□□□□ 0.79
PBX1-219ENST00000560641 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
PBX1-219ENST00000560641 TRIM27P14373 513 aa19.95■□□□□ 0.78
PBX1-219ENST00000560641 BRPF1P55201 1214 aaPredicted RBP19.95■□□□□ 0.78
PBX1-219ENST00000560641 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
PBX1-219ENST00000560641 NSD3Q9BZ95 1437 aa19.94■□□□□ 0.78
PBX1-219ENST00000560641 TRAPPC8Q9Y2L5 1435 aa19.94■□□□□ 0.78
PBX1-219ENST00000560641 SASS6Q6UVJ0 657 aa19.93■□□□□ 0.78
PBX1-219ENST00000560641 UQCRHLA0A096LP55 91 aa19.93■□□□□ 0.78
PBX1-219ENST00000560641 UQCRHP07919 91 aa19.93■□□□□ 0.78
PBX1-219ENST00000560641 NUCB2P80303 420 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 SSFA2P28290 1259 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 ZSCAN23Q3MJ62 389 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 CFAP44Q96MT7 982 aa19.92■□□□□ 0.78
PBX1-219ENST00000560641 DDX49Q9Y6V7 483 aaKnown RBP19.92■□□□□ 0.78
PBX1-219ENST00000560641 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
PBX1-219ENST00000560641 CD2BP2O95400 341 aaKnown RBP19.91■□□□□ 0.78
PBX1-219ENST00000560641 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
PBX1-219ENST00000560641 LMBRD1Q9NUN5 540 aa19.91■□□□□ 0.78
PBX1-219ENST00000560641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
PBX1-219ENST00000560641 R3HCC1Q9Y3T6 440 aaKnown RBP19.91■□□□□ 0.78
PBX1-219ENST00000560641 ZFYVE16Q7Z3T8 1539 aa19.9■□□□□ 0.78
PBX1-219ENST00000560641 ARAP3Q8WWN8 1544 aa19.9■□□□□ 0.78
PBX1-219ENST00000560641 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
PBX1-219ENST00000560641 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
PBX1-219ENST00000560641 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.78
PBX1-219ENST00000560641 GAS2L2Q8NHY3 880 aa19.89■□□□□ 0.78
PBX1-219ENST00000560641 DMTNQ08495 405 aa19.89■□□□□ 0.77
PBX1-219ENST00000560641 GCC1Q96CN9 775 aa19.89■□□□□ 0.77
PBX1-219ENST00000560641 CCDC94Q9BW85 323 aaPredicted RBP19.89■□□□□ 0.77
PBX1-219ENST00000560641 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
PBX1-219ENST00000560641 CCDC39Q9UFE4 941 aa19.89■□□□□ 0.77
PBX1-219ENST00000560641 MROH2AA6NES4 1674 aa19.89■□□□□ 0.77
PBX1-219ENST00000560641 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
PBX1-219ENST00000560641 RBM10P98175 930 aaKnown RBP19.88■□□□□ 0.77
PBX1-219ENST00000560641 ALDH1L2Q3SY69 923 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 RBSNQ9H1K0 784 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
PBX1-219ENST00000560641 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 GTF2F1P35269 517 aaKnown RBP eCLIP19.87■□□□□ 0.77
PBX1-219ENST00000560641 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 CFAP53Q96M91 514 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 FAM13BQ9NYF5 915 aa19.87■□□□□ 0.77
PBX1-219ENST00000560641 PLCH2O75038 1416 aa19.86■□□□□ 0.77
PBX1-219ENST00000560641 RABEP1Q15276 862 aa19.86■□□□□ 0.77
PBX1-219ENST00000560641 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
PBX1-219ENST00000560641 RRP7AQ9Y3A4 280 aaKnown RBP19.86■□□□□ 0.77
PBX1-219ENST00000560641 SMC4Q9NTJ3 1288 aa19.85■□□□□ 0.77
PBX1-219ENST00000560641 ADGRB1O14514 1584 aa19.85■□□□□ 0.77
PBX1-219ENST00000560641 SSH1Q8WYL5 1049 aa19.85■□□□□ 0.77
PBX1-219ENST00000560641 FANCAO15360 1455 aa19.85■□□□□ 0.77
PBX1-219ENST00000560641 CHMP4BQ9H444 224 aaKnown RBP19.85■□□□□ 0.77
PBX1-219ENST00000560641 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
PBX1-219ENST00000560641 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
PBX1-219ENST00000560641 ADGRB3O60242 1522 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 PPLO60437 1756 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 PTCH1Q13635 1447 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 AK9Q5TCS8 1911 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 IPO8O15397 1037 aaKnown RBP19.84■□□□□ 0.77
PBX1-219ENST00000560641 LRSAM1Q6UWE0 723 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 TBC1D9Q6ZT07 1266 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
PBX1-219ENST00000560641 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.77
PBX1-219ENST00000560641 TMEM57Q8N5G2 664 aa19.83■□□□□ 0.77
PBX1-219ENST00000560641 MYRIPQ8NFW9 859 aa19.82■□□□□ 0.76
PBX1-219ENST00000560641 PRIMPOLQ96LW4 560 aa19.81■□□□□ 0.76
PBX1-219ENST00000560641 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
PBX1-219ENST00000560641 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
PBX1-219ENST00000560641 ZSCAN20P17040 1043 aaPredicted RBP19.81■□□□□ 0.76
PBX1-219ENST00000560641 GTPBP4Q9BZE4 634 aaKnown RBP19.81■□□□□ 0.76
PBX1-219ENST00000560641 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
PBX1-219ENST00000560641 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
PBX1-219ENST00000560641 NEUROD2Q15784 382 aa19.8■□□□□ 0.76
PBX1-219ENST00000560641 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
PBX1-219ENST00000560641 LMTK2Q8IWU2 1503 aa19.8■□□□□ 0.76
PBX1-219ENST00000560641 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
PBX1-219ENST00000560641 CDC45O75419 566 aa19.8■□□□□ 0.76
PBX1-219ENST00000560641 MTHFSP49914 203 aa19.79■□□□□ 0.76
PBX1-219ENST00000560641 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
PBX1-219ENST00000560641 TRIM35Q9UPQ4 493 aa19.79■□□□□ 0.76
PBX1-219ENST00000560641 ARHGAP45Q92619 1136 aa19.79■□□□□ 0.76
PBX1-219ENST00000560641 HMGN5P82970 282 aaKnown RBP19.78■□□□□ 0.76
PBX1-219ENST00000560641 ANKRD36BQ8N2N9 1353 aa19.78■□□□□ 0.76
PBX1-219ENST00000560641 GPT2Q8TD30 523 aa19.78■□□□□ 0.76
PBX1-219ENST00000560641 LNPKQ9C0E8 428 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms