RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 FRAT2O75474 233 aaPredicted RBP24.11■■□□□ 1.45
PDE8A-211ENST00000559742 COG6Q9Y2V7 657 aa24.11■■□□□ 1.45
PDE8A-211ENST00000559742 AGLP35573 1532 aa24.1■■□□□ 1.45
PDE8A-211ENST00000559742 CENPQQ7L2Z9 268 aaPredicted RBP24.1■■□□□ 1.45
PDE8A-211ENST00000559742 RGS3P49796 1198 aa24.09■■□□□ 1.45
PDE8A-211ENST00000559742 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
PDE8A-211ENST00000559742 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
PDE8A-211ENST00000559742 TNNQ9UQP3 1299 aa24.09■■□□□ 1.45
PDE8A-211ENST00000559742 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 ARHGEF40Q8TER5 1519 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 SPATA31D1Q6ZQQ2 1576 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 TSR2Q969E8 191 aaKnown RBP24.07■■□□□ 1.44
PDE8A-211ENST00000559742 NCKAP5LQ9HCH0 1330 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
PDE8A-211ENST00000559742 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
PDE8A-211ENST00000559742 ZMYM3Q14202 1370 aa24.06■■□□□ 1.44
PDE8A-211ENST00000559742 RARSP54136 660 aaKnown RBP24.06■■□□□ 1.44
PDE8A-211ENST00000559742 CLUAP1Q96AJ1 413 aa24.06■■□□□ 1.44
PDE8A-211ENST00000559742 WDR63Q8IWG1 891 aa24.05■■□□□ 1.44
PDE8A-211ENST00000559742 METP08581 1390 aa24.04■■□□□ 1.44
PDE8A-211ENST00000559742 NLRP1Q9C000 1473 aa24.03■■□□□ 1.44
PDE8A-211ENST00000559742 IGHDP01880 384 aa24.02■■□□□ 1.44
PDE8A-211ENST00000559742 MAPK8IP3Q9UPT6 1336 aa24.02■■□□□ 1.44
PDE8A-211ENST00000559742 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
PDE8A-211ENST00000559742 DIAPH1O60610 1272 aaKnown RBP24■■□□□ 1.43
PDE8A-211ENST00000559742 RLBP1P12271 317 aa24■■□□□ 1.43
PDE8A-211ENST00000559742 CCDC27Q2M243 656 aa24■■□□□ 1.43
PDE8A-211ENST00000559742 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
PDE8A-211ENST00000559742 PDE3AQ14432 1141 aa23.99■■□□□ 1.43
PDE8A-211ENST00000559742 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
PDE8A-211ENST00000559742 SETD1AO15047 1707 aaKnown RBP23.99■■□□□ 1.43
PDE8A-211ENST00000559742 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
PDE8A-211ENST00000559742 MYH16Q9H6N6 1097 aa23.99■■□□□ 1.43
PDE8A-211ENST00000559742 COL3A1P02461 1466 aaPredicted RBP23.99■■□□□ 1.43
PDE8A-211ENST00000559742 C8orf34Q49A92 452 aa23.98■■□□□ 1.43
PDE8A-211ENST00000559742 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
PDE8A-211ENST00000559742 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
PDE8A-211ENST00000559742 NUTM2FA1L443 756 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 RRAGDQ9NQL2 400 aaPredicted RBP23.97■■□□□ 1.43
PDE8A-211ENST00000559742 TRIM35Q9UPQ4 493 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 KIF20BQ96Q89 1820 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 WASLO00401 505 aaPredicted RBP23.97■■□□□ 1.43
PDE8A-211ENST00000559742 RIPK4P57078 832 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 NME9Q86XW9 330 aa23.97■■□□□ 1.43
PDE8A-211ENST00000559742 NRXN3Q9Y4C0 1643 aa23.96■■□□□ 1.43
PDE8A-211ENST00000559742 HMOX1P09601 288 aa23.95■■□□□ 1.42
PDE8A-211ENST00000559742 CEBPAP49715 358 aaPredicted RBP23.95■■□□□ 1.42
PDE8A-211ENST00000559742 EXOSC9Q06265 439 aaKnown RBP23.95■■□□□ 1.42
PDE8A-211ENST00000559742 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
PDE8A-211ENST00000559742 ADGRB2O60241 1585 aa23.95■■□□□ 1.42
PDE8A-211ENST00000559742 PPIP5K1Q6PFW1 1433 aa23.95■■□□□ 1.42
PDE8A-211ENST00000559742 EMILIN1Q9Y6C2 1016 aa23.95■■□□□ 1.42
PDE8A-211ENST00000559742 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.94■■□□□ 1.42
PDE8A-211ENST00000559742 NUDT16Q96DE0 195 aaKnown RBP23.92■■□□□ 1.42
PDE8A-211ENST00000559742 MAP2P11137 1827 aaKnown RBP23.92■■□□□ 1.42
PDE8A-211ENST00000559742 TNRQ92752 1358 aa23.92■■□□□ 1.42
PDE8A-211ENST00000559742 DLC1Q96QB1 1528 aa23.92■■□□□ 1.42
PDE8A-211ENST00000559742 MED14O60244 1454 aa23.91■■□□□ 1.42
PDE8A-211ENST00000559742 PRKAR2BP31323 418 aa23.91■■□□□ 1.42
PDE8A-211ENST00000559742 SMC4Q9NTJ3 1288 aa23.9■■□□□ 1.42
PDE8A-211ENST00000559742 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.42
PDE8A-211ENST00000559742 PCDHB15Q9Y5E8 787 aa23.89■■□□□ 1.41
PDE8A-211ENST00000559742 ATP7BP35670 1465 aa23.88■■□□□ 1.41
PDE8A-211ENST00000559742 PNPLA6Q8IY17 1366 aa23.88■■□□□ 1.41
PDE8A-211ENST00000559742 FTSJ3Q8IY81 847 aaKnown RBP23.87■■□□□ 1.41
PDE8A-211ENST00000559742 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
PDE8A-211ENST00000559742 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
PDE8A-211ENST00000559742 SLC26A8Q96RN1 970 aa23.86■■□□□ 1.41
PDE8A-211ENST00000559742 CCDC61Q9Y6R9 512 aa23.86■■□□□ 1.41
PDE8A-211ENST00000559742 LRRC7Q96NW7 1537 aa23.85■■□□□ 1.41
PDE8A-211ENST00000559742 LTKP29376 864 aa23.85■■□□□ 1.41
PDE8A-211ENST00000559742 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
PDE8A-211ENST00000559742 SSH1Q8WYL5 1049 aa23.85■■□□□ 1.41
PDE8A-211ENST00000559742 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
PDE8A-211ENST00000559742 L1TD1Q5T7N2 865 aaKnown RBP23.84■■□□□ 1.41
PDE8A-211ENST00000559742 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
PDE8A-211ENST00000559742 ZMYND15Q9H091 742 aa23.84■■□□□ 1.41
PDE8A-211ENST00000559742 ROBO2Q9HCK4 1378 aa23.83■■□□□ 1.41
PDE8A-211ENST00000559742 PRR36Q9H6K5 1346 aa23.83■■□□□ 1.41
PDE8A-211ENST00000559742 VSIG10Q8N0Z9 540 aa23.83■■□□□ 1.41
PDE8A-211ENST00000559742 CPSF1Q10570 1443 aaKnown RBP23.83■■□□□ 1.41
PDE8A-211ENST00000559742 FCHSD2O94868 740 aa23.83■■□□□ 1.4
PDE8A-211ENST00000559742 COG3Q96JB2 828 aa23.82■■□□□ 1.4
PDE8A-211ENST00000559742 VIRMAQ69YN4 1812 aaKnown RBP23.82■■□□□ 1.4
PDE8A-211ENST00000559742 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
PDE8A-211ENST00000559742 CPS1P31327 1500 aa23.81■■□□□ 1.4
PDE8A-211ENST00000559742 SOX12O15370 315 aa23.81■■□□□ 1.4
PDE8A-211ENST00000559742 DZIP1LQ8IYY4 767 aaKnown RBP23.81■■□□□ 1.4
PDE8A-211ENST00000559742 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
PDE8A-211ENST00000559742 TRIM27P14373 513 aa23.81■■□□□ 1.4
PDE8A-211ENST00000559742 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
PDE8A-211ENST00000559742 NCBP3Q53F19 620 aaKnown RBP23.8■■□□□ 1.4
PDE8A-211ENST00000559742 PNNQ9H307 717 aaKnown RBP23.8■■□□□ 1.4
PDE8A-211ENST00000559742 NOB1Q9ULX3 412 aaKnown RBP23.8■■□□□ 1.4
PDE8A-211ENST00000559742 ITPRIPQ8IWB1 547 aa23.79■■□□□ 1.4
PDE8A-211ENST00000559742 ELL2O00472 640 aaPredicted RBP23.77■■□□□ 1.4
PDE8A-211ENST00000559742 IL13P35225 146 aa23.77■■□□□ 1.4
PDE8A-211ENST00000559742 PMFBP1Q8TBY8 1022 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms