RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 GCGRP47871 477 aa12.87□□□□□ -0.35
SPG11-213ENST00000558988 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
SPG11-213ENST00000558988 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
SPG11-213ENST00000558988 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
SPG11-213ENST00000558988 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
SPG11-213ENST00000558988 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
SPG11-213ENST00000558988 BIVM-ERCC5R4GMW8 1640 aa12.85□□□□□ -0.35
SPG11-213ENST00000558988 GDF11O95390 407 aa12.84□□□□□ -0.35
SPG11-213ENST00000558988 WNT7BP56706 349 aa12.84□□□□□ -0.35
SPG11-213ENST00000558988 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
SPG11-213ENST00000558988 RASSF7Q02833 373 aa12.83□□□□□ -0.36
SPG11-213ENST00000558988 VSIG8P0DPA2 414 aa12.82□□□□□ -0.36
SPG11-213ENST00000558988 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
SPG11-213ENST00000558988 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
SPG11-213ENST00000558988 ADAMTS12P58397 1594 aa12.79□□□□□ -0.36
SPG11-213ENST00000558988 SIAH2O43255 324 aa12.79□□□□□ -0.36
SPG11-213ENST00000558988 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
SPG11-213ENST00000558988 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
SPG11-213ENST00000558988 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
SPG11-213ENST00000558988 Q3C1V9 767 aa12.76□□□□□ -0.37
SPG11-213ENST00000558988 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
SPG11-213ENST00000558988 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
SPG11-213ENST00000558988 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
SPG11-213ENST00000558988 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
SPG11-213ENST00000558988 SOBPA7XYQ1 873 aa12.74□□□□□ -0.37
SPG11-213ENST00000558988 USB1Q9BQ65 265 aaKnown RBP12.74□□□□□ -0.37
SPG11-213ENST00000558988 ERCC6L2Q5T890 1561 aa12.73□□□□□ -0.37
SPG11-213ENST00000558988 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
SPG11-213ENST00000558988 XP32Q5T750 250 aa12.72□□□□□ -0.37
SPG11-213ENST00000558988 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
SPG11-213ENST00000558988 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
SPG11-213ENST00000558988 NUP160Q12769 1436 aa12.71□□□□□ -0.38
SPG11-213ENST00000558988 HIC1Q14526 733 aa12.69□□□□□ -0.38
SPG11-213ENST00000558988 GPAT2Q6NUI2 795 aa12.67□□□□□ -0.38
SPG11-213ENST00000558988 MRPL14Q6P1L8 145 aaKnown RBP12.67□□□□□ -0.38
SPG11-213ENST00000558988 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
SPG11-213ENST00000558988 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
SPG11-213ENST00000558988 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
SPG11-213ENST00000558988 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
SPG11-213ENST00000558988 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
SPG11-213ENST00000558988 SCARF1Q14162 830 aa12.64□□□□□ -0.39
SPG11-213ENST00000558988 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
SPG11-213ENST00000558988 KCNV2Q8TDN2 545 aa12.63□□□□□ -0.39
SPG11-213ENST00000558988 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
SPG11-213ENST00000558988 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
SPG11-213ENST00000558988 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
SPG11-213ENST00000558988 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
SPG11-213ENST00000558988 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
SPG11-213ENST00000558988 IGF1RP08069 1367 aa12.59□□□□□ -0.39
SPG11-213ENST00000558988 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
SPG11-213ENST00000558988 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
SPG11-213ENST00000558988 TTBK1Q5TCY1 1321 aaPredicted RBP12.59□□□□□ -0.39
SPG11-213ENST00000558988 IGHA1P01876 353 aa12.58□□□□□ -0.4
SPG11-213ENST00000558988 CUL7Q14999 1698 aa12.57□□□□□ -0.4
SPG11-213ENST00000558988 SH3BP2P78314 561 aa12.57□□□□□ -0.4
SPG11-213ENST00000558988 KRT76Q01546 638 aa12.57□□□□□ -0.4
SPG11-213ENST00000558988 HLA-CQ95604 372 aa12.57□□□□□ -0.4
SPG11-213ENST00000558988 DNMT3AQ9Y6K1 912 aaPredicted RBP12.57□□□□□ -0.4
SPG11-213ENST00000558988 TLL2Q9Y6L7 1015 aa12.57□□□□□ -0.4
SPG11-213ENST00000558988 GNPATO15228 680 aa12.56□□□□□ -0.4
SPG11-213ENST00000558988 JUNDP17535 347 aa12.56□□□□□ -0.4
SPG11-213ENST00000558988 NNTQ13423 1086 aa12.55□□□□□ -0.4
SPG11-213ENST00000558988 KRTAP4-8Q9BYQ9 185 aa12.55□□□□□ -0.4
SPG11-213ENST00000558988 CARMIL1Q5VZK9 1371 aa12.55□□□□□ -0.4
SPG11-213ENST00000558988 TIMP2P16035 220 aa12.54□□□□□ -0.4
SPG11-213ENST00000558988 MAN1A2O60476 641 aa12.53□□□□□ -0.4
SPG11-213ENST00000558988 IRS1P35568 1242 aa12.53□□□□□ -0.4
SPG11-213ENST00000558988 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
SPG11-213ENST00000558988 CNTNAP3Q9BZ76 1288 aa12.53□□□□□ -0.4
SPG11-213ENST00000558988 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.4
SPG11-213ENST00000558988 KDM4AO75164 1064 aa12.52□□□□□ -0.41
SPG11-213ENST00000558988 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.41
SPG11-213ENST00000558988 GPR161Q8N6U8 529 aaKnown RBP12.52□□□□□ -0.41
SPG11-213ENST00000558988 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
SPG11-213ENST00000558988 SEMA3EO15041 775 aa12.5□□□□□ -0.41
SPG11-213ENST00000558988 CD46P15529 392 aa12.49□□□□□ -0.41
SPG11-213ENST00000558988 ADH1CP00326 375 aa12.48□□□□□ -0.41
SPG11-213ENST00000558988 RBM26Q5T8P6 1007 aaKnown RBP12.48□□□□□ -0.41
SPG11-213ENST00000558988 ZNF385CQ66K41 422 aaPredicted RBP12.48□□□□□ -0.41
SPG11-213ENST00000558988 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
SPG11-213ENST00000558988 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
SPG11-213ENST00000558988 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
SPG11-213ENST00000558988 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
SPG11-213ENST00000558988 FOXK2Q01167 660 aa12.46□□□□□ -0.41
SPG11-213ENST00000558988 C6orf118Q5T5N4 469 aa12.46□□□□□ -0.41
SPG11-213ENST00000558988 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
SPG11-213ENST00000558988 GPR37O15354 613 aa12.45□□□□□ -0.42
SPG11-213ENST00000558988 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
SPG11-213ENST00000558988 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
SPG11-213ENST00000558988 PTPRGP23470 1445 aa12.45□□□□□ -0.42
SPG11-213ENST00000558988 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
SPG11-213ENST00000558988 LINC01559Q495D7 138 aa12.44□□□□□ -0.42
SPG11-213ENST00000558988 SVOPQ8N4V2 548 aa12.44□□□□□ -0.42
SPG11-213ENST00000558988 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
SPG11-213ENST00000558988 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
SPG11-213ENST00000558988 MPNDQ8N594 471 aa12.43□□□□□ -0.42
SPG11-213ENST00000558988 HOXA2O43364 376 aa12.41□□□□□ -0.42
SPG11-213ENST00000558988 USP46P62068 366 aa12.41□□□□□ -0.42
SPG11-213ENST00000558988 WHAMMQ8TF30 809 aa12.41□□□□□ -0.42
SPG11-213ENST00000558988 BAP1Q92560 729 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms