RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
RMDN3-207ENST00000558777 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
RMDN3-207ENST00000558777 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
RMDN3-207ENST00000558777 COG6Q9Y2V7 657 aa22.09■■□□□ 1.13
RMDN3-207ENST00000558777 FRAT1Q92837 279 aaPredicted RBP22.09■■□□□ 1.13
RMDN3-207ENST00000558777 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.12
RMDN3-207ENST00000558777 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
RMDN3-207ENST00000558777 AAMPQ13685 434 aa22.07■■□□□ 1.12
RMDN3-207ENST00000558777 SIRT1Q96EB6 747 aa22.07■■□□□ 1.12
RMDN3-207ENST00000558777 TRIM35Q9UPQ4 493 aa22.07■■□□□ 1.12
RMDN3-207ENST00000558777 CT47B1P0C2W7 299 aaPredicted RBP22.07■■□□□ 1.12
RMDN3-207ENST00000558777 HDGFP51858 240 aaKnown RBP22.07■■□□□ 1.12
RMDN3-207ENST00000558777 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
RMDN3-207ENST00000558777 IGHDP01880 384 aa22.06■■□□□ 1.12
RMDN3-207ENST00000558777 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
RMDN3-207ENST00000558777 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
RMDN3-207ENST00000558777 TNRQ92752 1358 aa22.05■■□□□ 1.12
RMDN3-207ENST00000558777 FAM135BQ49AJ0 1406 aa22.05■■□□□ 1.12
RMDN3-207ENST00000558777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.05■■□□□ 1.12
RMDN3-207ENST00000558777 TECPR2O15040 1411 aa22.05■■□□□ 1.12
RMDN3-207ENST00000558777 IL16Q14005 1332 aa22.04■■□□□ 1.12
RMDN3-207ENST00000558777 FAM161AQ3B820 660 aa22.04■■□□□ 1.12
RMDN3-207ENST00000558777 POLKQ9UBT6 870 aa22.04■■□□□ 1.12
RMDN3-207ENST00000558777 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
RMDN3-207ENST00000558777 EDC4Q6P2E9 1401 aaKnown RBP22.03■■□□□ 1.12
RMDN3-207ENST00000558777 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
RMDN3-207ENST00000558777 RLBP1P12271 317 aa22.03■■□□□ 1.12
RMDN3-207ENST00000558777 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
RMDN3-207ENST00000558777 FCHSD2O94868 740 aa22.02■■□□□ 1.12
RMDN3-207ENST00000558777 C8orf34Q49A92 452 aa22.02■■□□□ 1.12
RMDN3-207ENST00000558777 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
RMDN3-207ENST00000558777 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
RMDN3-207ENST00000558777 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
RMDN3-207ENST00000558777 TMEM2Q9UHN6 1383 aa22.01■■□□□ 1.11
RMDN3-207ENST00000558777 RIPK4P57078 832 aa22■■□□□ 1.11
RMDN3-207ENST00000558777 TNNQ9UQP3 1299 aa22■■□□□ 1.11
RMDN3-207ENST00000558777 RGS3P49796 1198 aa22■■□□□ 1.11
RMDN3-207ENST00000558777 NUDT16Q96DE0 195 aaKnown RBP22■■□□□ 1.11
RMDN3-207ENST00000558777 CPS1P31327 1500 aa21.99■■□□□ 1.11
RMDN3-207ENST00000558777 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
RMDN3-207ENST00000558777 CCDC61Q9Y6R9 512 aa21.98■■□□□ 1.11
RMDN3-207ENST00000558777 FBLN1P23142 703 aa21.97■■□□□ 1.11
RMDN3-207ENST00000558777 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
RMDN3-207ENST00000558777 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
RMDN3-207ENST00000558777 ZKSCAN2Q63HK3 967 aa21.97■■□□□ 1.11
RMDN3-207ENST00000558777 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
RMDN3-207ENST00000558777 AATKQ6ZMQ8 1374 aa21.95■■□□□ 1.11
RMDN3-207ENST00000558777 NME9Q86XW9 330 aa21.95■■□□□ 1.11
RMDN3-207ENST00000558777 UBR1Q8IWV7 1749 aa21.95■■□□□ 1.1
RMDN3-207ENST00000558777 PPM1GO15355 546 aaPredicted RBP21.95■■□□□ 1.1
RMDN3-207ENST00000558777 DDRGK1Q96HY6 314 aa21.95■■□□□ 1.1
RMDN3-207ENST00000558777 PCDHB15Q9Y5E8 787 aa21.95■■□□□ 1.1
RMDN3-207ENST00000558777 MVPQ14764 893 aaKnown RBP21.94■■□□□ 1.1
RMDN3-207ENST00000558777 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
RMDN3-207ENST00000558777 ADAMTS13Q76LX8 1427 aa21.94■■□□□ 1.1
RMDN3-207ENST00000558777 SMC4Q9NTJ3 1288 aa21.93■■□□□ 1.1
RMDN3-207ENST00000558777 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
RMDN3-207ENST00000558777 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
RMDN3-207ENST00000558777 NCKAP5LQ9HCH0 1330 aa21.92■■□□□ 1.1
RMDN3-207ENST00000558777 IL13P35225 146 aa21.92■■□□□ 1.1
RMDN3-207ENST00000558777 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
RMDN3-207ENST00000558777 CDK12Q9NYV4 1490 aaPredicted RBP21.92■■□□□ 1.1
RMDN3-207ENST00000558777 ROBO2Q9HCK4 1378 aa21.92■■□□□ 1.1
RMDN3-207ENST00000558777 ZNF692Q9BU19 519 aaPredicted RBP21.91■■□□□ 1.1
RMDN3-207ENST00000558777 ZRANB1Q9UGI0 708 aa21.91■■□□□ 1.1
RMDN3-207ENST00000558777 PRR36Q9H6K5 1346 aa21.91■■□□□ 1.1
RMDN3-207ENST00000558777 NEFMP07197 916 aa21.9■■□□□ 1.1
RMDN3-207ENST00000558777 FTSJ3Q8IY81 847 aaKnown RBP21.9■■□□□ 1.1
RMDN3-207ENST00000558777 COG3Q96JB2 828 aa21.9■■□□□ 1.1
RMDN3-207ENST00000558777 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
RMDN3-207ENST00000558777 PLEKHG1Q9ULL1 1385 aa21.9■■□□□ 1.1
RMDN3-207ENST00000558777 TRIM27P14373 513 aa21.89■■□□□ 1.09
RMDN3-207ENST00000558777 NBR1Q14596 966 aa21.89■■□□□ 1.09
RMDN3-207ENST00000558777 NFE2L2Q16236 605 aa21.89■■□□□ 1.09
RMDN3-207ENST00000558777 MAP2P11137 1827 aaKnown RBP21.89■■□□□ 1.09
RMDN3-207ENST00000558777 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
RMDN3-207ENST00000558777 LTKP29376 864 aa21.88■■□□□ 1.09
RMDN3-207ENST00000558777 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
RMDN3-207ENST00000558777 ATF7IPQ6VMQ6 1270 aa21.87■■□□□ 1.09
RMDN3-207ENST00000558777 HMOX1P09601 288 aa21.86■■□□□ 1.09
RMDN3-207ENST00000558777 C3P01024 1663 aa21.86■■□□□ 1.09
RMDN3-207ENST00000558777 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
RMDN3-207ENST00000558777 ALDH1L2Q3SY69 923 aa21.85■■□□□ 1.09
RMDN3-207ENST00000558777 NOB1Q9ULX3 412 aaKnown RBP21.85■■□□□ 1.09
RMDN3-207ENST00000558777 KIF16BQ96L93 1317 aa21.84■■□□□ 1.09
RMDN3-207ENST00000558777 CALD1Q05682 793 aaKnown RBP21.83■■□□□ 1.09
RMDN3-207ENST00000558777 ZNF428Q96B54 188 aa21.83■■□□□ 1.09
RMDN3-207ENST00000558777 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
RMDN3-207ENST00000558777 RRS1Q15050 365 aaKnown RBP21.83■■□□□ 1.08
RMDN3-207ENST00000558777 PDZRN3Q9UPQ7 1066 aa21.83■■□□□ 1.08
RMDN3-207ENST00000558777 ITSN1Q15811 1721 aa21.82■■□□□ 1.08
RMDN3-207ENST00000558777 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.82■■□□□ 1.08
RMDN3-207ENST00000558777 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
RMDN3-207ENST00000558777 IPO8O15397 1037 aaKnown RBP21.82■■□□□ 1.08
RMDN3-207ENST00000558777 BRPF1P55201 1214 aaPredicted RBP21.82■■□□□ 1.08
RMDN3-207ENST00000558777 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
RMDN3-207ENST00000558777 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
RMDN3-207ENST00000558777 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
RMDN3-207ENST00000558777 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
RMDN3-207ENST00000558777 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms