RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
SPG11-211ENST00000558561 SPSB2Q99619 263 aa7.22□□□□□ -1.25
SPG11-211ENST00000558561 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
SPG11-211ENST00000558561 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
SPG11-211ENST00000558561 RFC5P40937 340 aa7.21□□□□□ -1.26
SPG11-211ENST00000558561 PPP2R2DQ66LE6 453 aa7.21□□□□□ -1.26
SPG11-211ENST00000558561 FAM160A2Q8N612 972 aaPredicted RBP7.21□□□□□ -1.26
SPG11-211ENST00000558561 USB1Q9BQ65 265 aaKnown RBP7.21□□□□□ -1.26
SPG11-211ENST00000558561 MAGI1Q96QZ7 1491 aaPredicted RBP7.21□□□□□ -1.26
SPG11-211ENST00000558561 CFAP99D6REC4 459 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 ITGBL1O95965 494 aaPredicted RBP7.2□□□□□ -1.26
SPG11-211ENST00000558561 KCNC4Q03721 635 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 FAM9AQ8IZU1 332 aaPredicted RBP7.2□□□□□ -1.26
SPG11-211ENST00000558561 PRR7Q8TB68 274 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 GTF3C3Q9Y5Q9 886 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 CLASP1Q7Z460 1538 aa7.2□□□□□ -1.26
SPG11-211ENST00000558561 ARAP1Q96P48 1450 aa7.19□□□□□ -1.26
SPG11-211ENST00000558561 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
SPG11-211ENST00000558561 CEP170Q5SW79 1584 aa7.19□□□□□ -1.26
SPG11-211ENST00000558561 FHAD1B1AJZ9 1412 aa7.18□□□□□ -1.26
SPG11-211ENST00000558561 GRIN2AQ12879 1464 aa7.18□□□□□ -1.26
SPG11-211ENST00000558561 ADAMTS12P58397 1594 aa7.18□□□□□ -1.26
SPG11-211ENST00000558561 ADH1BP00325 375 aa7.18□□□□□ -1.26
SPG11-211ENST00000558561 TSC1Q92574 1164 aa7.18□□□□□ -1.26
SPG11-211ENST00000558561 AP1G2O75843 785 aa7.17□□□□□ -1.26
SPG11-211ENST00000558561 CTDSPL2Q05D32 466 aa7.17□□□□□ -1.26
SPG11-211ENST00000558561 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
SPG11-211ENST00000558561 TTBK1Q5TCY1 1321 aaPredicted RBP7.17□□□□□ -1.26
SPG11-211ENST00000558561 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
SPG11-211ENST00000558561 ERICH3Q5RHP9 1530 aa7.17□□□□□ -1.26
SPG11-211ENST00000558561 NUP160Q12769 1436 aa7.16□□□□□ -1.26
SPG11-211ENST00000558561 KIF27Q86VH2 1401 aa7.16□□□□□ -1.26
SPG11-211ENST00000558561 PER1O15534 1290 aaPredicted RBP7.15□□□□□ -1.26
SPG11-211ENST00000558561 S1PR4O95977 384 aa7.15□□□□□ -1.26
SPG11-211ENST00000558561 MSS51Q4VC12 460 aa7.15□□□□□ -1.26
SPG11-211ENST00000558561 TMEM259Q4ZIN3 620 aa7.15□□□□□ -1.26
SPG11-211ENST00000558561 SLC6A16Q9GZN6 736 aa7.15□□□□□ -1.26
SPG11-211ENST00000558561 JUNDP17535 347 aa7.14□□□□□ -1.27
SPG11-211ENST00000558561 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
SPG11-211ENST00000558561 PLA2G2EQ9NZK7 142 aa7.14□□□□□ -1.27
SPG11-211ENST00000558561 PPEF1O14829 653 aaPredicted RBP7.13□□□□□ -1.27
SPG11-211ENST00000558561 DXOO77932 396 aaKnown RBP7.13□□□□□ -1.27
SPG11-211ENST00000558561 MMP16P51512 607 aa7.13□□□□□ -1.27
SPG11-211ENST00000558561 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
SPG11-211ENST00000558561 LYPD8Q6UX82 237 aa7.13□□□□□ -1.27
SPG11-211ENST00000558561 HELBQ8NG08 1087 aaPredicted RBP7.13□□□□□ -1.27
SPG11-211ENST00000558561 LRRN4Q8WUT4 740 aa7.13□□□□□ -1.27
SPG11-211ENST00000558561 PRG4Q92954 1404 aaPredicted RBP7.12□□□□□ -1.27
SPG11-211ENST00000558561 USP17L8P0C7I0 530 aa7.12□□□□□ -1.27
SPG11-211ENST00000558561 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
SPG11-211ENST00000558561 PPP1R18Q6NYC8 613 aa7.11□□□□□ -1.27
SPG11-211ENST00000558561 RNF223E7ERA6 249 aa7.1□□□□□ -1.27
SPG11-211ENST00000558561 RANGAP1P46060 587 aaPredicted RBP7.1□□□□□ -1.27
SPG11-211ENST00000558561 HMX1Q9NP08 348 aaPredicted RBP7.1□□□□□ -1.27
SPG11-211ENST00000558561 SHROOM2Q13796 1616 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 PTPRNQ16849 979 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 IFFO2Q5TF58 517 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 CCDC24Q8N4L8 307 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 MTMR14Q8NCE2 650 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
SPG11-211ENST00000558561 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.09□□□□□ -1.27
SPG11-211ENST00000558561 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
SPG11-211ENST00000558561 MCM6Q14566 821 aa7.08□□□□□ -1.28
SPG11-211ENST00000558561 EPS8L1Q8TE68 723 aa7.08□□□□□ -1.28
SPG11-211ENST00000558561 EVA1BQ9NVM1 165 aa7.08□□□□□ -1.28
SPG11-211ENST00000558561 KIAA0586Q9BVV6 1533 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 RAPGEF2Q9Y4G8 1499 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 CCNYL3P0C7X3 344 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 CTHP32929 405 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 GGCXP38435 758 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 FLIIQ13045 1269 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 NR6A1Q15406 480 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
SPG11-211ENST00000558561 MAP10Q9P2G4 905 aa7.07□□□□□ -1.28
SPG11-211ENST00000558561 F12P00748 615 aaPredicted RBP7.06□□□□□ -1.28
SPG11-211ENST00000558561 PLA2G2CQ5R387 149 aa7.06□□□□□ -1.28
SPG11-211ENST00000558561 GJD4Q96KN9 370 aaPredicted RBP7.06□□□□□ -1.28
SPG11-211ENST00000558561 TRIM34Q9BYJ4 488 aa7.06□□□□□ -1.28
SPG11-211ENST00000558561 CUL7Q14999 1698 aa7.06□□□□□ -1.28
SPG11-211ENST00000558561 PRXQ9BXM0 1461 aa7.05□□□□□ -1.28
SPG11-211ENST00000558561 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
SPG11-211ENST00000558561 ANKLE1Q8NAG6 615 aa7.05□□□□□ -1.28
SPG11-211ENST00000558561 A0A0G2JS52 829 aa7.04□□□□□ -1.28
SPG11-211ENST00000558561 DISP1Q96F81 1524 aa7.03□□□□□ -1.28
SPG11-211ENST00000558561 ARID3CA6NKF2 412 aa7.03□□□□□ -1.28
SPG11-211ENST00000558561 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
SPG11-211ENST00000558561 POM121Q96HA1 1249 aa7.03□□□□□ -1.28
SPG11-211ENST00000558561 PTPRGP23470 1445 aa7.02□□□□□ -1.29
SPG11-211ENST00000558561 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
SPG11-211ENST00000558561 UNC93B1Q9H1C4 597 aa7.02□□□□□ -1.29
SPG11-211ENST00000558561 GDPD2Q9HCC8 539 aa7.02□□□□□ -1.29
SPG11-211ENST00000558561 LIAT1Q6ZQX7 453 aa7.01□□□□□ -1.29
SPG11-211ENST00000558561 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
SPG11-211ENST00000558561 TBC1D2BQ9UPU7 963 aa7.01□□□□□ -1.29
SPG11-211ENST00000558561 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
SPG11-211ENST00000558561 ADCY10Q96PN6 1610 aa7.01□□□□□ -1.29
SPG11-211ENST00000558561 IQGAP2Q13576 1575 aa7□□□□□ -1.29
SPG11-211ENST00000558561 LOC105371045A0A1W2PR82 267 aa7□□□□□ -1.29
SPG11-211ENST00000558561 SOCS7O14512 581 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms