RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TMOD2Q9NZR1 351 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 TEX14Q8IWB6 1497 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 CNNM1Q9NRU3 951 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 AKNAQ7Z591 1439 aa10.05□□□□□ -0.8
CHD8-213ENST00000557364 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
CHD8-213ENST00000557364 SMC3Q9UQE7 1217 aa10.05□□□□□ -0.8
CHD8-213ENST00000557364 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
CHD8-213ENST00000557364 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
CHD8-213ENST00000557364 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
CHD8-213ENST00000557364 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
CHD8-213ENST00000557364 PRAM1Q96QH2 718 aa10.04□□□□□ -0.8
CHD8-213ENST00000557364 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
CHD8-213ENST00000557364 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
CHD8-213ENST00000557364 TXLNBQ8N3L3 684 aa10.04□□□□□ -0.8
CHD8-213ENST00000557364 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
CHD8-213ENST00000557364 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
CHD8-213ENST00000557364 CDK5RAP3Q96JB5 506 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 MTHFSP49914 203 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 JMYQ8N9B5 988 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 GNAI2P04899 355 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 ANKRD1Q15327 319 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 CCDC57Q2TAC2 916 aa10.03□□□□□ -0.8
CHD8-213ENST00000557364 HMOX1P09601 288 aa10.02□□□□□ -0.8
CHD8-213ENST00000557364 SRCIN1Q9C0H9 1055 aa10.02□□□□□ -0.8
CHD8-213ENST00000557364 DESP17661 470 aa10.02□□□□□ -0.8
CHD8-213ENST00000557364 BICD2Q8TD16 824 aa10.02□□□□□ -0.8
CHD8-213ENST00000557364 CDK19Q9BWU1 502 aa10.02□□□□□ -0.8
CHD8-213ENST00000557364 ERBINQ96RT1 1412 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 TTC39AQ5SRH9 613 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 ZNF530Q6P9A1 599 aaPredicted RBP10.02□□□□□ -0.81
CHD8-213ENST00000557364 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
CHD8-213ENST00000557364 OFD1O75665 1012 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 FSD1Q9BTV5 496 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 GGNBP2Q9H3C7 697 aa10.02□□□□□ -0.81
CHD8-213ENST00000557364 AMOTQ4VCS5 1084 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 SASS6Q6UVJ0 657 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■■■ 149.1
CHD8-213ENST00000557364 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 ABCA10Q8WWZ4 1543 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 RUSC2Q8N2Y8 1516 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 CDC45O75419 566 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 BCL2L13Q9BXK5 485 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 IGHMBP2P38935 993 aaKnown RBP10.01□□□□□ -0.81
CHD8-213ENST00000557364 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.01□□□□□ -0.81
CHD8-213ENST00000557364 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
CHD8-213ENST00000557364 CDKL5O76039 1030 aa10□□□□□ -0.81
CHD8-213ENST00000557364 LETM1O95202 739 aaPredicted RBP10□□□□□ -0.81
CHD8-213ENST00000557364 SETQ01105 290 aaPredicted RBP10□□□□□ -0.81
CHD8-213ENST00000557364 ZPR1O75312 459 aa10□□□□□ -0.81
CHD8-213ENST00000557364 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
CHD8-213ENST00000557364 GCC1Q96CN9 775 aa10□□□□□ -0.81
CHD8-213ENST00000557364 CTNNA3Q9UI47 895 aa10□□□□□ -0.81
CHD8-213ENST00000557364 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
CHD8-213ENST00000557364 NESP48681 1621 aa10□□□□□ -0.81
CHD8-213ENST00000557364 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
CHD8-213ENST00000557364 ADGRL1O94910 1474 aa10□□□□□ -0.81
CHD8-213ENST00000557364 PDE4CQ08493 712 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 SYCP1Q15431 976 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 PLIN1O60240 522 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 ZNF396Q96N95 335 aaPredicted RBP9.99□□□□□ -0.81
CHD8-213ENST00000557364 GZF1Q9H116 711 aaPredicted RBP9.99□□□□□ -0.81
CHD8-213ENST00000557364 TIAM1Q13009 1591 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 PIP4K2BP78356 416 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 ZNF644Q9H582 1327 aaPredicted RBP9.99□□□□□ -0.81
CHD8-213ENST00000557364 FYB1O15117 783 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 TEX13AQ9BXU3 409 aaPredicted RBP9.99□□□□□ -0.81
CHD8-213ENST00000557364 STIM1Q13586 685 aa9.99□□□□□ -0.81
CHD8-213ENST00000557364 SURF6O75683 361 aaKnown RBP9.98□□□□□ -0.81
CHD8-213ENST00000557364 SOGA3Q5TF21 947 aa9.98□□□□□ -0.81
CHD8-213ENST00000557364 CFAP70Q5T0N1 1121 aa9.98□□□□□ -0.81
CHD8-213ENST00000557364 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
CHD8-213ENST00000557364 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
CHD8-213ENST00000557364 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
CHD8-213ENST00000557364 AKAP2Q9Y2D5 859 aa9.98□□□□□ -0.81
CHD8-213ENST00000557364 DENND4BO75064 1496 aaPredicted RBP9.98□□□□□ -0.81
CHD8-213ENST00000557364 CCP110O43303 1012 aa9.97□□□□□ -0.81
CHD8-213ENST00000557364 PRKAR2BP31323 418 aa9.97□□□□□ -0.81
CHD8-213ENST00000557364 TNIP1Q15025 636 aa9.97□□□□□ -0.81
CHD8-213ENST00000557364 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
CHD8-213ENST00000557364 MAGEC2Q9UBF1 373 aaPredicted RBP9.97□□□□□ -0.81
CHD8-213ENST00000557364 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
CHD8-213ENST00000557364 FILIP1LQ4L180 1135 aa9.97□□□□□ -0.81
CHD8-213ENST00000557364 ITSN2Q9NZM3 1697 aa9.97□□□□□ -0.81
CHD8-213ENST00000557364 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHD8-213ENST00000557364 SMARCE1Q969G3 411 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms