RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	DIP2A	Q14689	1571 aa		18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	NASP	P49321	788 aa	Predicted RBP	18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	CCDC173	Q0VFZ6	552 aa		18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	SETBP1	Q9Y6X0	1596 aa		18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	NPHP4	O75161	1426 aa	Predicted RBP	18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	NRXN3	Q9Y4C0	1643 aa		18.8	■□□□□ 0.6
PAPOLA-223	ENST00000557320	USP19	O94966	1318 aa		18.79	■□□□□ 0.6
PAPOLA-223	ENST00000557320	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.79	■□□□□ 0.6
PAPOLA-223	ENST00000557320	CBX1	P83916	185 aa		18.79	■□□□□ 0.6
PAPOLA-223	ENST00000557320	GAS2L3	Q86XJ1	694 aa		18.79	■□□□□ 0.6
PAPOLA-223	ENST00000557320	ANKLE2	Q86XL3	938 aa		18.78	■□□□□ 0.6
PAPOLA-223	ENST00000557320	PLEKHG1	Q9ULL1	1385 aa		18.78	■□□□□ 0.6
PAPOLA-223	ENST00000557320	UTP14C	Q5TAP6	766 aa	Known RBP	18.77	■□□□□ 0.6
PAPOLA-223	ENST00000557320	RPGRIP1L	Q68CZ1	1315 aa		18.77	■□□□□ 0.6
PAPOLA-223	ENST00000557320	DMRT2	Q9Y5R5	561 aa		18.77	■□□□□ 0.6
PAPOLA-223	ENST00000557320	SETD1A	O15047	1707 aa	Known RBP	18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	MYOM2	P54296	1465 aa		18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	NCKAP5L	Q9HCH0	1330 aa		18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	TERF1	P54274	439 aa		18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	STAG3	Q9UJ98	1225 aa		18.76	■□□□□ 0.59
PAPOLA-223	ENST00000557320	LTK	P29376	864 aa		18.75	■□□□□ 0.59
PAPOLA-223	ENST00000557320	NRXN1	Q9ULB1	1477 aa		18.75	■□□□□ 0.59
PAPOLA-223	ENST00000557320	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
PAPOLA-223	ENST00000557320	DYNC1I1	O14576	645 aa		18.74	■□□□□ 0.59
PAPOLA-223	ENST00000557320	CCDC94	Q9BW85	323 aa	Predicted RBP	18.74	■□□□□ 0.59
PAPOLA-223	ENST00000557320	RALBP1	Q15311	655 aa		18.74	■□□□□ 0.59
PAPOLA-223	ENST00000557320	BRD4	O60885	1362 aa	Predicted RBP	18.74	■□□□□ 0.59
PAPOLA-223	ENST00000557320	NWD1	Q149M9	1564 aa		18.73	■□□□□ 0.59
PAPOLA-223	ENST00000557320	ZSCAN20	P17040	1043 aa	Predicted RBP	18.73	■□□□□ 0.59
PAPOLA-223	ENST00000557320	EID1	Q9Y6B2	187 aa		18.73	■□□□□ 0.59
PAPOLA-223	ENST00000557320	HDGF	P51858	240 aa	Known RBP	18.72	■□□□□ 0.59
PAPOLA-223	ENST00000557320	NLRP13	Q86W25	1043 aa		18.72	■□□□□ 0.59
PAPOLA-223	ENST00000557320	TXNDC2	Q86VQ3	553 aa		18.71	■□□□□ 0.59
PAPOLA-223	ENST00000557320	LRPPRC	P42704	1394 aa	Known RBP	18.71	■□□□□ 0.59
PAPOLA-223	ENST00000557320	HSCB	Q8IWL3	235 aa		18.71	■□□□□ 0.59
PAPOLA-223	ENST00000557320	CGN	Q9P2M7	1197 aa	Known RBP	18.71	■□□□□ 0.59
PAPOLA-223	ENST00000557320	LTBP4	Q8N2S1	1624 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	GBP4	Q96PP9	640 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	ADAMTS13	Q76LX8	1427 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	KIF20A	O95235	890 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	TMEM51	Q9NW97	253 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	LAMC1	P11047	1609 aa		18.7	■□□□□ 0.58
PAPOLA-223	ENST00000557320	IGSF3	O75054	1194 aa		18.69	■□□□□ 0.58
PAPOLA-223	ENST00000557320	ZNF830	Q96NB3	372 aa	Predicted RBP	18.69	■□□□□ 0.58
PAPOLA-223	ENST00000557320	MAPK8IP3	Q9UPT6	1336 aa		18.69	■□□□□ 0.58
PAPOLA-223	ENST00000557320	STRCP1	A6NGW2	1772 aa		18.69	■□□□□ 0.58
PAPOLA-223	ENST00000557320	CHGA	P10645	457 aa	Known RBP	18.68	■□□□□ 0.58
PAPOLA-223	ENST00000557320	CHD2	O14647	1828 aa	Known RBP	18.68	■□□□□ 0.58
PAPOLA-223	ENST00000557320	GTPBP4	Q9BZE4	634 aa	Known RBP	18.67	■□□□□ 0.58
PAPOLA-223	ENST00000557320	CSPP1	Q1MSJ5	1256 aa		18.67	■□□□□ 0.58
PAPOLA-223	ENST00000557320	TBC1D32	Q96NH3	1257 aa		18.67	■□□□□ 0.58
PAPOLA-223	ENST00000557320	PIK3C2G	O75747	1445 aa		18.67	■□□□□ 0.58
PAPOLA-223	ENST00000557320	LETM1	O95202	739 aa	Predicted RBP	18.66	■□□□□ 0.58
PAPOLA-223	ENST00000557320	MFAP1	P55081	439 aa	Known RBP	18.66	■□□□□ 0.58
PAPOLA-223	ENST00000557320	SKOR2	Q2VWA4	1001 aa	Predicted RBP	18.66	■□□□□ 0.58
PAPOLA-223	ENST00000557320	PRAG1	Q86YV5	1406 aa		18.66	■□□□□ 0.58
PAPOLA-223	ENST00000557320	IGHD	P01880	384 aa		18.66	■□□□□ 0.58
PAPOLA-223	ENST00000557320	CPS1	P31327	1500 aa		18.65	■□□□□ 0.58
PAPOLA-223	ENST00000557320	USP47	Q96K76	1375 aa		18.65	■□□□□ 0.58
PAPOLA-223	ENST00000557320	XRN1	Q8IZH2	1706 aa	Known RBP	18.65	■□□□□ 0.58
PAPOLA-223	ENST00000557320	PIK3R4	Q99570	1358 aa		18.65	■□□□□ 0.58
PAPOLA-223	ENST00000557320	ALK	Q9UM73	1620 aa		18.65	■□□□□ 0.58
PAPOLA-223	ENST00000557320	GOLGA6L22	H0YM25	854 aa		18.64	■□□□□ 0.58
PAPOLA-223	ENST00000557320	ZBTB22	O15209	634 aa		18.64	■□□□□ 0.58
PAPOLA-223	ENST00000557320	KIAA1210	Q9ULL0	1709 aa		18.64	■□□□□ 0.57
PAPOLA-223	ENST00000557320	SASS6	Q6UVJ0	657 aa		18.64	■□□□□ 0.57
PAPOLA-223	ENST00000557320	ZNF771	Q7L3S4	317 aa	Predicted RBP	18.64	■□□□□ 0.57
PAPOLA-223	ENST00000557320	FOXD4L1	Q9NU39	408 aa		18.64	■□□□□ 0.57
PAPOLA-223	ENST00000557320	CC2D1B	Q5T0F9	858 aa	Known RBP	18.64	■□□□□ 0.57
PAPOLA-223	ENST00000557320	DDX49	Q9Y6V7	483 aa	Known RBP	18.63	■□□□□ 0.57
PAPOLA-223	ENST00000557320		E9PSI1	815 aa		18.63	■□□□□ 0.57
PAPOLA-223	ENST00000557320	PPP1R9B	Q96SB3	815 aa		18.63	■□□□□ 0.57
PAPOLA-223	ENST00000557320	CHMP4A	Q9BY43	222 aa		18.63	■□□□□ 0.57
PAPOLA-223	ENST00000557320	VGF	O15240	615 aa	Predicted RBP	18.62	■□□□□ 0.57
PAPOLA-223	ENST00000557320	PTMA	P06454	111 aa	Known RBP	18.62	■□□□□ 0.57
PAPOLA-223	ENST00000557320	IQSEC2	Q5JU85	1478 aa		18.62	■□□□□ 0.57
PAPOLA-223	ENST00000557320	HSP90AB1	P08238	724 aa	Known RBP	18.62	■□□□□ 0.57
PAPOLA-223	ENST00000557320	KNDC1	Q76NI1	1749 aa		18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	NKTR	P30414	1462 aa	Known RBP	18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	TSC1	Q92574	1164 aa		18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	TBX22	Q9Y458	520 aa		18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	TNPO1	Q92973	898 aa	Known RBP	18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	SPDYE4	A6NLX3	237 aa		18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	C22orf23	Q9BZE7	217 aa		18.61	■□□□□ 0.57
PAPOLA-223	ENST00000557320	ASXL1	Q8IXJ9	1541 aa		18.6	■□□□□ 0.57
PAPOLA-223	ENST00000557320	CARD11	Q9BXL7	1154 aa		18.59	■□□□□ 0.57
PAPOLA-223	ENST00000557320	ROCK2	O75116	1388 aa	Known RBP	18.59	■□□□□ 0.57
PAPOLA-223	ENST00000557320	FTSJ3	Q8IY81	847 aa	Known RBP	18.59	■□□□□ 0.57
PAPOLA-223	ENST00000557320	XIRP1	Q702N8	1843 aa	Known RBP	18.58	■□□□□ 0.56
PAPOLA-223	ENST00000557320	NOL7	Q9UMY1	257 aa	Known RBP	18.58	■□□□□ 0.56
PAPOLA-223	ENST00000557320	ADGRF5	Q8IZF2	1346 aa		18.57	■□□□□ 0.56
PAPOLA-223	ENST00000557320	GOLGA2	Q08379	1002 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	PANK3	Q9H999	370 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	RGL3	Q3MIN7	710 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	TAF3	Q5VWG9	929 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	JARID2	Q92833	1246 aa	Predicted RBP	18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	COG6	Q9Y2V7	657 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	ADGRB1	O14514	1584 aa		18.56	■□□□□ 0.56
PAPOLA-223	ENST00000557320	PTPRU	Q92729	1446 aa		18.55	■□□□□ 0.56

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