RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 ONECUT3O60422 494 aaPredicted RBP13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 EIF3AQ14152 1382 aaKnown RBP13.82□□□□□ -0.2
SRP54-AS1-201ENST00000554945 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
SRP54-AS1-201ENST00000554945 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
SRP54-AS1-201ENST00000554945 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
SRP54-AS1-201ENST00000554945 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
SRP54-AS1-201ENST00000554945 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
SRP54-AS1-201ENST00000554945 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
SRP54-AS1-201ENST00000554945 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
SRP54-AS1-201ENST00000554945 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
SRP54-AS1-201ENST00000554945 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
SRP54-AS1-201ENST00000554945 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
SRP54-AS1-201ENST00000554945 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
SRP54-AS1-201ENST00000554945 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
SRP54-AS1-201ENST00000554945 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
SRP54-AS1-201ENST00000554945 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
SRP54-AS1-201ENST00000554945 HRCP23327 699 aa13.77□□□□□ -0.21
SRP54-AS1-201ENST00000554945 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.21
SRP54-AS1-201ENST00000554945 CHRDL2Q6WN34 429 aa13.77□□□□□ -0.21
SRP54-AS1-201ENST00000554945 NRAPQ86VF7 1730 aa13.76□□□□□ -0.21
SRP54-AS1-201ENST00000554945 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
SRP54-AS1-201ENST00000554945 NGDNQ8NEJ9 315 aaKnown RBP13.76□□□□□ -0.21
SRP54-AS1-201ENST00000554945 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
SRP54-AS1-201ENST00000554945 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
SRP54-AS1-201ENST00000554945 DEFB132Q7Z7B7 95 aa13.75□□□□□ -0.21
SRP54-AS1-201ENST00000554945 A0A0G2JS52 829 aa13.74□□□□□ -0.21
SRP54-AS1-201ENST00000554945 MYT1Q01538 1121 aa13.74□□□□□ -0.21
SRP54-AS1-201ENST00000554945 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
SRP54-AS1-201ENST00000554945 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
SRP54-AS1-201ENST00000554945 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
SRP54-AS1-201ENST00000554945 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
SRP54-AS1-201ENST00000554945 BAG6P46379 1132 aa13.71□□□□□ -0.21
SRP54-AS1-201ENST00000554945 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
SRP54-AS1-201ENST00000554945 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
SRP54-AS1-201ENST00000554945 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
SRP54-AS1-201ENST00000554945 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
SRP54-AS1-201ENST00000554945 ATP7BP35670 1465 aa13.69□□□□□ -0.22
SRP54-AS1-201ENST00000554945 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
SRP54-AS1-201ENST00000554945 KIAA1210Q9ULL0 1709 aa13.68□□□□□ -0.22
SRP54-AS1-201ENST00000554945 CDK19Q9BWU1 502 aa13.68□□□□□ -0.22
SRP54-AS1-201ENST00000554945 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
SRP54-AS1-201ENST00000554945 THSD7AQ9UPZ6 1657 aa13.67□□□□□ -0.22
SRP54-AS1-201ENST00000554945 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
SRP54-AS1-201ENST00000554945 LRP5O75197 1615 aa13.66□□□□□ -0.22
SRP54-AS1-201ENST00000554945 NBPF8Q3BBV2 869 aa13.66□□□□□ -0.22
SRP54-AS1-201ENST00000554945 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
SRP54-AS1-201ENST00000554945 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
SRP54-AS1-201ENST00000554945 TOPAZ1Q8N9V7 1692 aa13.66□□□□□ -0.22
SRP54-AS1-201ENST00000554945 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
SRP54-AS1-201ENST00000554945 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
SRP54-AS1-201ENST00000554945 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
SRP54-AS1-201ENST00000554945 ACEP12821 1306 aa13.64□□□□□ -0.23
SRP54-AS1-201ENST00000554945 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
SRP54-AS1-201ENST00000554945 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
SRP54-AS1-201ENST00000554945 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
SRP54-AS1-201ENST00000554945 EVA1CP58658 441 aa13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 POLA2Q14181 598 aa13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
SRP54-AS1-201ENST00000554945 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
SRP54-AS1-201ENST00000554945 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
SRP54-AS1-201ENST00000554945 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
SRP54-AS1-201ENST00000554945 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
SRP54-AS1-201ENST00000554945 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
SRP54-AS1-201ENST00000554945 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
SRP54-AS1-201ENST00000554945 NLRP13Q86W25 1043 aa13.6□□□□□ -0.23
SRP54-AS1-201ENST00000554945 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 CPDO75976 1380 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 TRIM37O94972 964 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 USP19O94966 1318 aa13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
SRP54-AS1-201ENST00000554945 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
SRP54-AS1-201ENST00000554945 R3HDM1Q15032 1099 aaKnown RBP13.58□□□□□ -0.24
SRP54-AS1-201ENST00000554945 CAMKK2Q96RR4 588 aa13.58□□□□□ -0.24
SRP54-AS1-201ENST00000554945 LMO7Q8WWI1 1683 aa13.58□□□□□ -0.24
SRP54-AS1-201ENST00000554945 APBA3O96018 575 aa13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 GCP02774 474 aa13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
SRP54-AS1-201ENST00000554945 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
SRP54-AS1-201ENST00000554945 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
SRP54-AS1-201ENST00000554945 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
SRP54-AS1-201ENST00000554945 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
SRP54-AS1-201ENST00000554945 RREB1Q92766 1687 aa13.53□□□□□ -0.24
SRP54-AS1-201ENST00000554945 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms