RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
AL049839.2-201ENST00000553947 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 NLRP1Q9C000 1473 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.554e-12■■□□□ 14.4
AL049839.2-201ENST00000553947 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 RRP9O43818 475 aaKnown RBP11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 ARXQ96QS3 562 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 METP08581 1390 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.55
AL049839.2-201ENST00000553947 FBLN1P23142 703 aa11.58□□□□□ -0.55
AL049839.2-201ENST00000553947 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 MED14O60244 1454 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 MS4A1P11836 297 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 CENPQQ7L2Z9 268 aaPredicted RBP11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 TNRQ92752 1358 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 KIF20BQ96Q89 1820 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 BCL2L13Q9BXK5 485 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 ATP7BP35670 1465 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 CANXP27824 592 aaKnown RBP11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 POLKQ9UBT6 870 aa11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 TMEM2Q9UHN6 1383 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 IGHDP01880 384 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 RLBP1P12271 317 aa11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NME9Q86XW9 330 aa11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 LTKP29376 864 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 TECPR2O15040 1411 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 L1TD1Q5T7N2 865 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 CPS1P31327 1500 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 RIPK4P57078 832 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 RGS3P49796 1198 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 LRRC7Q96NW7 1537 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 MAP2P11137 1827 aaKnown RBP11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 HMOX1P09601 288 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 FCHSD2O94868 740 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 SLC26A8Q96RN1 970 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 NUTM2FA1L443 756 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 C8orf34Q49A92 452 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 AAMPQ13685 434 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms