RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
NEK9-202ENST00000553823 LTBP4Q8N2S1 1624 aa15.96■□□□□ 0.15
NEK9-202ENST00000553823 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
NEK9-202ENST00000553823 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
NEK9-202ENST00000553823 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
NEK9-202ENST00000553823 FYB1O15117 783 aa15.94■□□□□ 0.14
NEK9-202ENST00000553823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.94■□□□□ 0.14
NEK9-202ENST00000553823 ORAI2Q96SN7 254 aa15.94■□□□□ 0.14
NEK9-202ENST00000553823 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
NEK9-202ENST00000553823 KIF1AQ12756 1690 aa15.94■□□□□ 0.14
NEK9-202ENST00000553823 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
NEK9-202ENST00000553823 TTC21BQ7Z4L5 1316 aa15.93■□□□□ 0.14
NEK9-202ENST00000553823 GGNBP2Q9H3C7 697 aa15.92■□□□□ 0.14
NEK9-202ENST00000553823 SSH2Q76I76 1423 aa15.92■□□□□ 0.14
NEK9-202ENST00000553823 BRD4O60885 1362 aaPredicted RBP15.91■□□□□ 0.14
NEK9-202ENST00000553823 NLRP13Q86W25 1043 aa15.91■□□□□ 0.14
NEK9-202ENST00000553823 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
NEK9-202ENST00000553823 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
NEK9-202ENST00000553823 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
NEK9-202ENST00000553823 NME9Q86XW9 330 aa15.9■□□□□ 0.14
NEK9-202ENST00000553823 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
NEK9-202ENST00000553823 PSME1Q06323 249 aa15.89■□□□□ 0.13
NEK9-202ENST00000553823 CCDC184Q52MB2 194 aa15.89■□□□□ 0.13
NEK9-202ENST00000553823 FOXO3O43524 673 aa15.88■□□□□ 0.13
NEK9-202ENST00000553823 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
NEK9-202ENST00000553823 COG3Q96JB2 828 aa15.87■□□□□ 0.13
NEK9-202ENST00000553823 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
NEK9-202ENST00000553823 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
NEK9-202ENST00000553823 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
NEK9-202ENST00000553823 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
NEK9-202ENST00000553823 PIK3C2AO00443 1686 aa15.85■□□□□ 0.13
NEK9-202ENST00000553823 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
NEK9-202ENST00000553823 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
NEK9-202ENST00000553823 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
NEK9-202ENST00000553823 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
NEK9-202ENST00000553823 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
NEK9-202ENST00000553823 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
NEK9-202ENST00000553823 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
NEK9-202ENST00000553823 XPCQ01831 940 aaPredicted RBP15.83■□□□□ 0.12
NEK9-202ENST00000553823 ABTB2Q8N961 1025 aa15.83■□□□□ 0.12
NEK9-202ENST00000553823 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
NEK9-202ENST00000553823 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
NEK9-202ENST00000553823 MTHFSP49914 203 aa15.81■□□□□ 0.12
NEK9-202ENST00000553823 NLRP6P59044 892 aa15.81■□□□□ 0.12
NEK9-202ENST00000553823 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
NEK9-202ENST00000553823 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
NEK9-202ENST00000553823 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
NEK9-202ENST00000553823 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
NEK9-202ENST00000553823 PXDNQ92626 1479 aa15.79■□□□□ 0.12
NEK9-202ENST00000553823 SBNO1A3KN83 1393 aa15.79■□□□□ 0.12
NEK9-202ENST00000553823 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
NEK9-202ENST00000553823 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
NEK9-202ENST00000553823 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
NEK9-202ENST00000553823 ALS2Q96Q42 1657 aa15.78■□□□□ 0.12
NEK9-202ENST00000553823 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
NEK9-202ENST00000553823 NHSL1Q5SYE7 1610 aa15.77■□□□□ 0.12
NEK9-202ENST00000553823 FBLN1P23142 703 aa15.77■□□□□ 0.12
NEK9-202ENST00000553823 POLKQ9UBT6 870 aa15.77■□□□□ 0.12
NEK9-202ENST00000553823 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
NEK9-202ENST00000553823 TOM1O60784 492 aa15.76■□□□□ 0.11
NEK9-202ENST00000553823 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
NEK9-202ENST00000553823 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
NEK9-202ENST00000553823 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
NEK9-202ENST00000553823 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
NEK9-202ENST00000553823 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
NEK9-202ENST00000553823 SPATA31A3Q5VYP0 1347 aa15.74■□□□□ 0.11
NEK9-202ENST00000553823 SOX12O15370 315 aa15.74■□□□□ 0.11
NEK9-202ENST00000553823 RRS1Q15050 365 aaKnown RBP15.74■□□□□ 0.11
NEK9-202ENST00000553823 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
NEK9-202ENST00000553823 CDK12Q9NYV4 1490 aaPredicted RBP15.73■□□□□ 0.11
NEK9-202ENST00000553823 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
NEK9-202ENST00000553823 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.11
NEK9-202ENST00000553823 CERKQ8TCT0 537 aa15.73■□□□□ 0.11
NEK9-202ENST00000553823 EMILIN1Q9Y6C2 1016 aa15.73■□□□□ 0.11
NEK9-202ENST00000553823 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
NEK9-202ENST00000553823 INSRP06213 1382 aa15.73■□□□□ 0.11
NEK9-202ENST00000553823 USP19O94966 1318 aa15.72■□□□□ 0.11
NEK9-202ENST00000553823 KCNH5Q8NCM2 988 aa15.72■□□□□ 0.11
NEK9-202ENST00000553823 SLIT3O75094 1523 aa15.72■□□□□ 0.11
NEK9-202ENST00000553823 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.11
NEK9-202ENST00000553823 SHPRHQ149N8 1683 aa15.71■□□□□ 0.11
NEK9-202ENST00000553823 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
NEK9-202ENST00000553823 AHDC1Q5TGY3 1603 aaPredicted RBP15.71■□□□□ 0.11
NEK9-202ENST00000553823 MAP3K19Q56UN5 1328 aa15.7■□□□□ 0.1
NEK9-202ENST00000553823 NFAT5O94916 1531 aa15.7■□□□□ 0.1
NEK9-202ENST00000553823 LTN1O94822 1766 aa15.7■□□□□ 0.1
NEK9-202ENST00000553823 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
NEK9-202ENST00000553823 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
NEK9-202ENST00000553823 GCP02774 474 aa15.69■□□□□ 0.1
NEK9-202ENST00000553823 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
NEK9-202ENST00000553823 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
NEK9-202ENST00000553823 KIF24Q5T7B8 1368 aa15.69■□□□□ 0.1
NEK9-202ENST00000553823 MED1Q15648 1581 aaPredicted RBP15.69■□□□□ 0.1
NEK9-202ENST00000553823 AMPHP49418 695 aa15.68■□□□□ 0.1
NEK9-202ENST00000553823 PIP4K2BP78356 416 aa15.68■□□□□ 0.1
NEK9-202ENST00000553823 FLT4P35916 1363 aa15.67■□□□□ 0.1
NEK9-202ENST00000553823 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
NEK9-202ENST00000553823 CRYBG1Q9Y4K1 1723 aa15.67■□□□□ 0.1
NEK9-202ENST00000553823 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
NEK9-202ENST00000553823 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms