RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 TRAK1Q9UPV9 953 aa10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 ABCC11Q96J66 1382 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 UNC5CLQ8IV45 518 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 GLI3P10071 1580 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 RALGAPBQ86X10 1494 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 FMN2Q9NZ56 1722 aa10.16□□□□□ -0.78
PRPF40B-214ENST00000551320 FAM83GA6ND36 823 aa10.15□□□□□ -0.78
PRPF40B-214ENST00000551320 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
PRPF40B-214ENST00000551320 C14orf93Q9H972 538 aaKnown RBP10.15□□□□□ -0.78
PRPF40B-214ENST00000551320 POGKQ9P215 609 aa10.15□□□□□ -0.78
PRPF40B-214ENST00000551320 TECPR2O15040 1411 aa10.15□□□□□ -0.79
PRPF40B-214ENST00000551320 PRAG1Q86YV5 1406 aa10.15□□□□□ -0.79
PRPF40B-214ENST00000551320 ANKRD30BQ9BXX2 1392 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 PRR36Q9H6K5 1346 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 A0A0G2JS52 829 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 MYT1Q01538 1121 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 PSME1Q06323 249 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 NUTM2GQ5VZR2 741 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
PRPF40B-214ENST00000551320 MARF1Q9Y4F3 1742 aaKnown RBP10.13□□□□□ -0.79
PRPF40B-214ENST00000551320 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
PRPF40B-214ENST00000551320 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.79
PRPF40B-214ENST00000551320 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
PRPF40B-214ENST00000551320 SLIT2O94813 1529 aa10.12□□□□□ -0.79
PRPF40B-214ENST00000551320 PRKAR2AP13861 404 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-214ENST00000551320 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-214ENST00000551320 RAB3GAP2Q9H2M9 1393 aa10.12□□□□□ -0.79
PRPF40B-214ENST00000551320 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
PRPF40B-214ENST00000551320 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
PRPF40B-214ENST00000551320 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-214ENST00000551320 USP32Q8NFA0 1604 aa10.11□□□□□ -0.79
PRPF40B-214ENST00000551320 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
PRPF40B-214ENST00000551320 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
PRPF40B-214ENST00000551320 CHRNA2Q15822 529 aa10.1□□□□□ -0.79
PRPF40B-214ENST00000551320 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
PRPF40B-214ENST00000551320 GSE1Q14687 1217 aa10.09□□□□□ -0.79
PRPF40B-214ENST00000551320 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
PRPF40B-214ENST00000551320 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
PRPF40B-214ENST00000551320 VPS72Q15906 364 aa10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 KRT27Q7Z3Y8 459 aa10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 NRXN1Q9ULB1 1477 aa10.08□□□□□ -0.8
PRPF40B-214ENST00000551320 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
PRPF40B-214ENST00000551320 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
PRPF40B-214ENST00000551320 ZC3H6P61129 1189 aaKnown RBP10.07□□□□□ -0.8
PRPF40B-214ENST00000551320 FAM212AQ96EL1 285 aa10.07□□□□□ -0.8
PRPF40B-214ENST00000551320 USP35Q9P2H5 1018 aa10.07□□□□□ -0.8
PRPF40B-214ENST00000551320 ADGRB1O14514 1584 aa10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 NGDNQ8NEJ9 315 aaKnown RBP10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 ACIN1Q9UKV3 1341 aaKnown RBP10.06□□□□□ -0.8
PRPF40B-214ENST00000551320 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-214ENST00000551320 SBNO1A3KN83 1393 aa10.05□□□□□ -0.8
PRPF40B-214ENST00000551320 WASLO00401 505 aaPredicted RBP10.05□□□□□ -0.8
PRPF40B-214ENST00000551320 RGL2O15211 777 aa10.05□□□□□ -0.8
PRPF40B-214ENST00000551320 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
PRPF40B-214ENST00000551320 ZBTB7CA1YPR0 619 aa10.04□□□□□ -0.8
PRPF40B-214ENST00000551320 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-214ENST00000551320 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-214ENST00000551320 ARHGEF10O15013 1369 aa10.03□□□□□ -0.8
PRPF40B-214ENST00000551320 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
PRPF40B-214ENST00000551320 CDK19Q9BWU1 502 aa10.03□□□□□ -0.8
PRPF40B-214ENST00000551320 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
PRPF40B-214ENST00000551320 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.8
PRPF40B-214ENST00000551320 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
PRPF40B-214ENST00000551320 NRAPQ86VF7 1730 aa10.02□□□□□ -0.8
PRPF40B-214ENST00000551320 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 R3HDM1Q15032 1099 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 CCDC125Q86Z20 511 aa10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 DLC1Q96QB1 1528 aa10.02□□□□□ -0.81
PRPF40B-214ENST00000551320 ANKARQ7Z5J8 1434 aa10.01□□□□□ -0.81
PRPF40B-214ENST00000551320 TRIM37O94972 964 aa10.01□□□□□ -0.81
PRPF40B-214ENST00000551320 ALS2Q96Q42 1657 aa10.01□□□□□ -0.81
PRPF40B-214ENST00000551320 HRCP23327 699 aa10□□□□□ -0.81
PRPF40B-214ENST00000551320 CABP2Q9NPB3 220 aa10□□□□□ -0.81
PRPF40B-214ENST00000551320 TULP4Q9NRJ4 1543 aa10□□□□□ -0.81
PRPF40B-214ENST00000551320 ACEP12821 1306 aa10□□□□□ -0.81
PRPF40B-214ENST00000551320 NWD2Q9ULI1 1742 aa9.99□□□□□ -0.81
PRPF40B-214ENST00000551320 ATP7BP35670 1465 aa9.99□□□□□ -0.81
PRPF40B-214ENST00000551320 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
PRPF40B-214ENST00000551320 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
PRPF40B-214ENST00000551320 ADGRB2O60241 1585 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms