RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
CNOT2-229ENST00000551179 SIRT1Q96EB6 747 aa13.36□□□□□ -0.27
CNOT2-229ENST00000551179 TECPR2O15040 1411 aa13.36□□□□□ -0.27
CNOT2-229ENST00000551179 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
CNOT2-229ENST00000551179 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
CNOT2-229ENST00000551179 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
CNOT2-229ENST00000551179 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
CNOT2-229ENST00000551179 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
CNOT2-229ENST00000551179 APAF1O14727 1248 aa13.34□□□□□ -0.27
CNOT2-229ENST00000551179 MTHFSP49914 203 aa13.34□□□□□ -0.27
CNOT2-229ENST00000551179 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
CNOT2-229ENST00000551179 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
CNOT2-229ENST00000551179 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
CNOT2-229ENST00000551179 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
CNOT2-229ENST00000551179 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
CNOT2-229ENST00000551179 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
CNOT2-229ENST00000551179 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
CNOT2-229ENST00000551179 PPIP5K1Q6PFW1 1433 aa13.31□□□□□ -0.28
CNOT2-229ENST00000551179 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
CNOT2-229ENST00000551179 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
CNOT2-229ENST00000551179 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
CNOT2-229ENST00000551179 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
CNOT2-229ENST00000551179 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
CNOT2-229ENST00000551179 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
CNOT2-229ENST00000551179 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 C3P01024 1663 aa13.3□□□□□ -0.28
CNOT2-229ENST00000551179 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
CNOT2-229ENST00000551179 METP08581 1390 aa13.29□□□□□ -0.28
CNOT2-229ENST00000551179 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CNOT2-229ENST00000551179 SLIT1O75093 1534 aa13.29□□□□□ -0.28
CNOT2-229ENST00000551179 ITSN1Q15811 1721 aa13.28□□□□□ -0.28
CNOT2-229ENST00000551179 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
CNOT2-229ENST00000551179 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
CNOT2-229ENST00000551179 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
CNOT2-229ENST00000551179 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
CNOT2-229ENST00000551179 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
CNOT2-229ENST00000551179 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
CNOT2-229ENST00000551179 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
CNOT2-229ENST00000551179 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
CNOT2-229ENST00000551179 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
CNOT2-229ENST00000551179 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
CNOT2-229ENST00000551179 FYB1O15117 783 aa13.26□□□□□ -0.29
CNOT2-229ENST00000551179 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
CNOT2-229ENST00000551179 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
CNOT2-229ENST00000551179 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CNOT2-229ENST00000551179 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
CNOT2-229ENST00000551179 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
CNOT2-229ENST00000551179 TCP11L2Q8N4U5 519 aa13.25□□□□□ -0.29
CNOT2-229ENST00000551179 NUDT16Q96DE0 195 aaKnown RBP13.25□□□□□ -0.29
CNOT2-229ENST00000551179 COG3Q96JB2 828 aa13.25□□□□□ -0.29
CNOT2-229ENST00000551179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.297e-9■■□□□ 12.9
CNOT2-229ENST00000551179 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
CNOT2-229ENST00000551179 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
CNOT2-229ENST00000551179 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
CNOT2-229ENST00000551179 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
CNOT2-229ENST00000551179 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
CNOT2-229ENST00000551179 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
CNOT2-229ENST00000551179 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
CNOT2-229ENST00000551179 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
CNOT2-229ENST00000551179 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-229ENST00000551179 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-229ENST00000551179 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
CNOT2-229ENST00000551179 MS4A1P11836 297 aa13.22□□□□□ -0.29
CNOT2-229ENST00000551179 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
CNOT2-229ENST00000551179 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
CNOT2-229ENST00000551179 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
CNOT2-229ENST00000551179 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
CNOT2-229ENST00000551179 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
CNOT2-229ENST00000551179 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
CNOT2-229ENST00000551179 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
CNOT2-229ENST00000551179 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 PLIN1O60240 522 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-229ENST00000551179 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 AAMPQ13685 434 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
CNOT2-229ENST00000551179 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
CNOT2-229ENST00000551179 IL16Q14005 1332 aa13.19□□□□□ -0.3
CNOT2-229ENST00000551179 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
CNOT2-229ENST00000551179 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-229ENST00000551179 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
CNOT2-229ENST00000551179 MYT1Q01538 1121 aa13.19□□□□□ -0.3
CNOT2-229ENST00000551179 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-229ENST00000551179 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
CNOT2-229ENST00000551179 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CNOT2-229ENST00000551179 FCHSD2O94868 740 aa13.18□□□□□ -0.3
CNOT2-229ENST00000551179 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
CNOT2-229ENST00000551179 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CNOT2-229ENST00000551179 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
CNOT2-229ENST00000551179 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
CNOT2-229ENST00000551179 LTKP29376 864 aa13.17□□□□□ -0.3
CNOT2-229ENST00000551179 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
CNOT2-229ENST00000551179 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
CNOT2-229ENST00000551179 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms