RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 NPATQ14207 1427 aa13.1□□□□□ -0.31
ERBB3-214ENST00000550070 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
ERBB3-214ENST00000550070 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-214ENST00000550070 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.317e-6■■■□□ 19.2
ERBB3-214ENST00000550070 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
ERBB3-214ENST00000550070 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
ERBB3-214ENST00000550070 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
ERBB3-214ENST00000550070 CD109Q6YHK3 1445 aa13.09□□□□□ -0.31
ERBB3-214ENST00000550070 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
ERBB3-214ENST00000550070 GGT6Q6P531 493 aa13.07□□□□□ -0.32
ERBB3-214ENST00000550070 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
ERBB3-214ENST00000550070 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
ERBB3-214ENST00000550070 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
ERBB3-214ENST00000550070 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
ERBB3-214ENST00000550070 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
ERBB3-214ENST00000550070 GLI2P10070 1586 aa13.06□□□□□ -0.32
ERBB3-214ENST00000550070 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
ERBB3-214ENST00000550070 EVC2Q86UK5 1308 aa13.06□□□□□ -0.32
ERBB3-214ENST00000550070 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
ERBB3-214ENST00000550070 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
ERBB3-214ENST00000550070 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
ERBB3-214ENST00000550070 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
ERBB3-214ENST00000550070 DNAJC5Q9H3Z4 198 aa13.05□□□□□ -0.32
ERBB3-214ENST00000550070 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
ERBB3-214ENST00000550070 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
ERBB3-214ENST00000550070 NSD2O96028 1365 aa13.05□□□□□ -0.32
ERBB3-214ENST00000550070 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
ERBB3-214ENST00000550070 FRMPD1Q5SYB0 1578 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 TRIM27P14373 513 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
ERBB3-214ENST00000550070 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-214ENST00000550070 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
ERBB3-214ENST00000550070 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
ERBB3-214ENST00000550070 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERBB3-214ENST00000550070 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
ERBB3-214ENST00000550070 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.32
ERBB3-214ENST00000550070 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.32
ERBB3-214ENST00000550070 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.33
ERBB3-214ENST00000550070 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
ERBB3-214ENST00000550070 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 MFAP1P55081 439 aaKnown RBP13.01□□□□□ -0.33
ERBB3-214ENST00000550070 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 ABCC3O15438 1527 aa13.01□□□□□ -0.33
ERBB3-214ENST00000550070 DIP2BQ9P265 1576 aa13□□□□□ -0.33
ERBB3-214ENST00000550070 NEXMIFQ5QGS0 1516 aa13□□□□□ -0.33
ERBB3-214ENST00000550070 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
ERBB3-214ENST00000550070 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
ERBB3-214ENST00000550070 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
ERBB3-214ENST00000550070 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
ERBB3-214ENST00000550070 ABCC11Q96J66 1382 aa13□□□□□ -0.33
ERBB3-214ENST00000550070 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
ERBB3-214ENST00000550070 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
ERBB3-214ENST00000550070 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
ERBB3-214ENST00000550070 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
ERBB3-214ENST00000550070 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
ERBB3-214ENST00000550070 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
ERBB3-214ENST00000550070 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
ERBB3-214ENST00000550070 MCM4P33991 863 aa12.98□□□□□ -0.33
ERBB3-214ENST00000550070 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
ERBB3-214ENST00000550070 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
ERBB3-214ENST00000550070 STK26Q9P289 416 aa12.97□□□□□ -0.33
ERBB3-214ENST00000550070 FYB1O15117 783 aa12.97□□□□□ -0.33
ERBB3-214ENST00000550070 RIPK4P57078 832 aa12.97□□□□□ -0.33
ERBB3-214ENST00000550070 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
ERBB3-214ENST00000550070 IL16Q14005 1332 aa12.97□□□□□ -0.33
ERBB3-214ENST00000550070 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
ERBB3-214ENST00000550070 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
ERBB3-214ENST00000550070 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
ERBB3-214ENST00000550070 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
ERBB3-214ENST00000550070 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
ERBB3-214ENST00000550070 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
ERBB3-214ENST00000550070 IDI1Q13907 227 aa12.95□□□□□ -0.34
ERBB3-214ENST00000550070 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
ERBB3-214ENST00000550070 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
ERBB3-214ENST00000550070 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
ERBB3-214ENST00000550070 RRAGDQ9NQL2 400 aaPredicted RBP12.94□□□□□ -0.34
ERBB3-214ENST00000550070 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
ERBB3-214ENST00000550070 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
ERBB3-214ENST00000550070 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
ERBB3-214ENST00000550070 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
ERBB3-214ENST00000550070 NUCB1Q02818 461 aa12.93□□□□□ -0.34
ERBB3-214ENST00000550070 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
ERBB3-214ENST00000550070 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
ERBB3-214ENST00000550070 CFAP74Q9C0B2 1584 aa12.93□□□□□ -0.34
ERBB3-214ENST00000550070 GOLGA6L3A6NEY3 463 aa12.93□□□□□ -0.34
ERBB3-214ENST00000550070 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
ERBB3-214ENST00000550070 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
ERBB3-214ENST00000550070 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 MED14O60244 1454 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 PTPRMP28827 1452 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 MYO5BQ9ULV0 1848 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 TRAK2O60296 914 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms