RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 ABCC1P33527 1531 aa13.08□□□□□ -0.31
SLC38A1-205ENST00000548979 TRAPPC8Q9Y2L5 1435 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 OATP04181 439 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 DNAJB2P25686 324 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
SLC38A1-205ENST00000548979 IRF6O14896 467 aa13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 RNF40O75150 1001 aa13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 ZMYND10O75800 440 aa13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 MLECQ14165 292 aa13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 HECW2Q9P2P5 1572 aa13.06□□□□□ -0.32
SLC38A1-205ENST00000548979 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC38A1-205ENST00000548979 ARHGEF12Q9NZN5 1544 aa13.04□□□□□ -0.32
SLC38A1-205ENST00000548979 REREQ9P2R6 1566 aa13.04□□□□□ -0.32
SLC38A1-205ENST00000548979 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
SLC38A1-205ENST00000548979 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
SLC38A1-205ENST00000548979 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
SLC38A1-205ENST00000548979 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
SLC38A1-205ENST00000548979 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
SLC38A1-205ENST00000548979 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
SLC38A1-205ENST00000548979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
SLC38A1-205ENST00000548979 PPP4CP60510 307 aa13.02□□□□□ -0.33
SLC38A1-205ENST00000548979 AGLP35573 1532 aa13.02□□□□□ -0.33
SLC38A1-205ENST00000548979 SAMD9LQ8IVG5 1584 aa13.02□□□□□ -0.33
SLC38A1-205ENST00000548979 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
SLC38A1-205ENST00000548979 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
SLC38A1-205ENST00000548979 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
SLC38A1-205ENST00000548979 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
SLC38A1-205ENST00000548979 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
SLC38A1-205ENST00000548979 DIP2CQ9Y2E4 1556 aa13□□□□□ -0.33
SLC38A1-205ENST00000548979 NCOA2Q15596 1464 aa13□□□□□ -0.33
SLC38A1-205ENST00000548979 LRRC9Q6ZRR7 1453 aa12.99□□□□□ -0.33
SLC38A1-205ENST00000548979 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-205ENST00000548979 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
SLC38A1-205ENST00000548979 SLC10A3P09131 477 aa12.98□□□□□ -0.33
SLC38A1-205ENST00000548979 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
SLC38A1-205ENST00000548979 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
SLC38A1-205ENST00000548979 APLP1P51693 650 aa12.98□□□□□ -0.33
SLC38A1-205ENST00000548979 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 ABCA6Q8N139 1617 aa12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
SLC38A1-205ENST00000548979 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
SLC38A1-205ENST00000548979 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
SLC38A1-205ENST00000548979 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.34
SLC38A1-205ENST00000548979 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
SLC38A1-205ENST00000548979 A2MP01023 1474 aa12.95□□□□□ -0.34
SLC38A1-205ENST00000548979 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
SLC38A1-205ENST00000548979 PLA2G2EQ9NZK7 142 aa12.94□□□□□ -0.34
SLC38A1-205ENST00000548979 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
SLC38A1-205ENST00000548979 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
SLC38A1-205ENST00000548979 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-205ENST00000548979 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
SLC38A1-205ENST00000548979 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
SLC38A1-205ENST00000548979 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
SLC38A1-205ENST00000548979 MDM2Q00987 491 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-205ENST00000548979 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-205ENST00000548979 DHX29Q7Z478 1369 aaKnown RBP12.92□□□□□ -0.34
SLC38A1-205ENST00000548979 CEBPAP49715 358 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-205ENST00000548979 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
SLC38A1-205ENST00000548979 REPIN1Q9BWE0 567 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-205ENST00000548979 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
SLC38A1-205ENST00000548979 GGT6Q6P531 493 aa12.9□□□□□ -0.34
SLC38A1-205ENST00000548979 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.35
SLC38A1-205ENST00000548979 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
SLC38A1-205ENST00000548979 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
SLC38A1-205ENST00000548979 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
SLC38A1-205ENST00000548979 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
SLC38A1-205ENST00000548979 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
SLC38A1-205ENST00000548979 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
SLC38A1-205ENST00000548979 KIF3BO15066 747 aa12.87□□□□□ -0.35
SLC38A1-205ENST00000548979 CFHP08603 1231 aa12.87□□□□□ -0.35
SLC38A1-205ENST00000548979 NPATQ14207 1427 aa12.87□□□□□ -0.35
SLC38A1-205ENST00000548979 HSPA2P54652 639 aa12.86□□□□□ -0.35
SLC38A1-205ENST00000548979 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
SLC38A1-205ENST00000548979 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
SLC38A1-205ENST00000548979 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
SLC38A1-205ENST00000548979 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
SLC38A1-205ENST00000548979 MTRQ99707 1265 aa12.85□□□□□ -0.35
SLC38A1-205ENST00000548979 MROH2AA6NES4 1674 aa12.84□□□□□ -0.35
SLC38A1-205ENST00000548979 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
SLC38A1-205ENST00000548979 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
SLC38A1-205ENST00000548979 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
SLC38A1-205ENST00000548979 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.35
SLC38A1-205ENST00000548979 TRIM66O15016 1216 aa12.83□□□□□ -0.36
SLC38A1-205ENST00000548979 COPS2P61201 443 aa12.83□□□□□ -0.36
SLC38A1-205ENST00000548979 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
SLC38A1-205ENST00000548979 C3P01024 1663 aa12.83□□□□□ -0.36
SLC38A1-205ENST00000548979 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
SLC38A1-205ENST00000548979 AK7Q96M32 723 aa12.81□□□□□ -0.36
SLC38A1-205ENST00000548979 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
SLC38A1-205ENST00000548979 ACTN4O43707 911 aaKnown RBP12.8□□□□□ -0.36
SLC38A1-205ENST00000548979 AMHR2Q16671 573 aa12.8□□□□□ -0.36
SLC38A1-205ENST00000548979 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms