RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
C12orf49-202ENST00000547606 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
C12orf49-202ENST00000547606 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
C12orf49-202ENST00000547606 TOPAZ1Q8N9V7 1692 aa18.67■□□□□ 0.58
C12orf49-202ENST00000547606 PXDNQ92626 1479 aa18.67■□□□□ 0.58
C12orf49-202ENST00000547606 PSDA5PKW4 1024 aaPredicted RBP18.67■□□□□ 0.58
C12orf49-202ENST00000547606 PSME1Q06323 249 aa18.67■□□□□ 0.58
C12orf49-202ENST00000547606 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
C12orf49-202ENST00000547606 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
C12orf49-202ENST00000547606 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
C12orf49-202ENST00000547606 TESK2Q96S53 571 aa18.66■□□□□ 0.58
C12orf49-202ENST00000547606 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
C12orf49-202ENST00000547606 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
C12orf49-202ENST00000547606 EIF4G2P78344 907 aaKnown RBP eCLIP18.62■□□□□ 0.57
C12orf49-202ENST00000547606 ACEP12821 1306 aa18.62■□□□□ 0.57
C12orf49-202ENST00000547606 PLCH1Q4KWH8 1693 aa18.61■□□□□ 0.57
C12orf49-202ENST00000547606 PLEKHG3A1L390 1219 aa18.61■□□□□ 0.57
C12orf49-202ENST00000547606 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
C12orf49-202ENST00000547606 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
C12orf49-202ENST00000547606 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
C12orf49-202ENST00000547606 TMF1P82094 1093 aa18.6■□□□□ 0.57
C12orf49-202ENST00000547606 SLIT2O94813 1529 aa18.59■□□□□ 0.57
C12orf49-202ENST00000547606 POLR3AO14802 1390 aaPredicted RBP18.59■□□□□ 0.57
C12orf49-202ENST00000547606 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
C12orf49-202ENST00000547606 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
C12orf49-202ENST00000547606 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
C12orf49-202ENST00000547606 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
C12orf49-202ENST00000547606 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.57
C12orf49-202ENST00000547606 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.57
C12orf49-202ENST00000547606 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
C12orf49-202ENST00000547606 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
C12orf49-202ENST00000547606 NWD2Q9ULI1 1742 aa18.57■□□□□ 0.56
C12orf49-202ENST00000547606 TRPM3Q9HCF6 1732 aaPredicted RBP18.56■□□□□ 0.56
C12orf49-202ENST00000547606 SEPT12Q8IYM1 358 aa18.55■□□□□ 0.56
C12orf49-202ENST00000547606 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
C12orf49-202ENST00000547606 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
C12orf49-202ENST00000547606 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
C12orf49-202ENST00000547606 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
C12orf49-202ENST00000547606 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
C12orf49-202ENST00000547606 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
C12orf49-202ENST00000547606 USP6P35125 1406 aa18.52■□□□□ 0.56
C12orf49-202ENST00000547606 BAG6P46379 1132 aa18.52■□□□□ 0.56
C12orf49-202ENST00000547606 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
C12orf49-202ENST00000547606 YY1P25490 414 aa18.51■□□□□ 0.55
C12orf49-202ENST00000547606 HAP1P54257 671 aaPredicted RBP18.51■□□□□ 0.55
C12orf49-202ENST00000547606 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
C12orf49-202ENST00000547606 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
C12orf49-202ENST00000547606 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
C12orf49-202ENST00000547606 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
C12orf49-202ENST00000547606 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
C12orf49-202ENST00000547606 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
C12orf49-202ENST00000547606 AKAP12Q02952 1782 aa18.5■□□□□ 0.55
C12orf49-202ENST00000547606 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
C12orf49-202ENST00000547606 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
C12orf49-202ENST00000547606 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
C12orf49-202ENST00000547606 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
C12orf49-202ENST00000547606 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
C12orf49-202ENST00000547606 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
C12orf49-202ENST00000547606 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
C12orf49-202ENST00000547606 CCDC9Q9Y3X0 531 aaKnown RBP18.48■□□□□ 0.55
C12orf49-202ENST00000547606 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
C12orf49-202ENST00000547606 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
C12orf49-202ENST00000547606 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
C12orf49-202ENST00000547606 EN1Q05925 392 aaPredicted RBP18.46■□□□□ 0.55
C12orf49-202ENST00000547606 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
C12orf49-202ENST00000547606 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
C12orf49-202ENST00000547606 A0A0G2JS52 829 aa18.45■□□□□ 0.54
C12orf49-202ENST00000547606 MYT1Q01538 1121 aa18.45■□□□□ 0.54
C12orf49-202ENST00000547606 VPS72Q15906 364 aa18.45■□□□□ 0.54
C12orf49-202ENST00000547606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.45■□□□□ 0.54
C12orf49-202ENST00000547606 SSH2Q76I76 1423 aa18.45■□□□□ 0.54
C12orf49-202ENST00000547606 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
C12orf49-202ENST00000547606 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
C12orf49-202ENST00000547606 MYOM1P52179 1685 aa18.44■□□□□ 0.54
C12orf49-202ENST00000547606 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
C12orf49-202ENST00000547606 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
C12orf49-202ENST00000547606 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
C12orf49-202ENST00000547606 NLRP6P59044 892 aa18.42■□□□□ 0.54
C12orf49-202ENST00000547606 TTC21AQ8NDW8 1320 aa18.42■□□□□ 0.54
C12orf49-202ENST00000547606 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
C12orf49-202ENST00000547606 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
C12orf49-202ENST00000547606 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
C12orf49-202ENST00000547606 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
C12orf49-202ENST00000547606 NME9Q86XW9 330 aa18.4■□□□□ 0.54
C12orf49-202ENST00000547606 PHRF1Q9P1Y6 1649 aaKnown RBP18.4■□□□□ 0.54
C12orf49-202ENST00000547606 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
C12orf49-202ENST00000547606 KIF7Q2M1P5 1343 aa18.39■□□□□ 0.53
C12orf49-202ENST00000547606 RREB1Q92766 1687 aa18.38■□□□□ 0.53
C12orf49-202ENST00000547606 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
C12orf49-202ENST00000547606 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
C12orf49-202ENST00000547606 USP19O94966 1318 aa18.38■□□□□ 0.53
C12orf49-202ENST00000547606 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
C12orf49-202ENST00000547606 SOX12O15370 315 aa18.37■□□□□ 0.53
C12orf49-202ENST00000547606 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
C12orf49-202ENST00000547606 DISP2A7MBM2 1401 aa18.37■□□□□ 0.53
C12orf49-202ENST00000547606 ZBTB7CA1YPR0 619 aa18.36■□□□□ 0.53
C12orf49-202ENST00000547606 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
C12orf49-202ENST00000547606 NSD3Q9BZ95 1437 aa18.35■□□□□ 0.53
C12orf49-202ENST00000547606 KIAA0232Q92628 1395 aa18.35■□□□□ 0.53
C12orf49-202ENST00000547606 GCP02774 474 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms