RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 POGKQ9P215 609 aa27.73■■■□□ 2.03
CACNB3-205ENST00000547392 DLC1Q96QB1 1528 aa27.73■■■□□ 2.03
CACNB3-205ENST00000547392 MINK1Q8N4C8 1332 aaPredicted RBP27.72■■■□□ 2.03
CACNB3-205ENST00000547392 IL16Q14005 1332 aa27.72■■■□□ 2.03
CACNB3-205ENST00000547392 PNPLA6Q8IY17 1366 aa27.72■■■□□ 2.03
CACNB3-205ENST00000547392 KIF20BQ96Q89 1820 aa27.72■■■□□ 2.03
CACNB3-205ENST00000547392 TMPOP42166 694 aaKnown RBP27.71■■■□□ 2.03
CACNB3-205ENST00000547392 DAXXQ9UER7 740 aaPredicted RBP27.7■■■□□ 2.02
CACNB3-205ENST00000547392 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.02
CACNB3-205ENST00000547392 FBXO31Q5XUX0 539 aaPredicted RBP27.69■■■□□ 2.02
CACNB3-205ENST00000547392 HDGFL2Q7Z4V5 671 aaPredicted RBP27.69■■■□□ 2.02
CACNB3-205ENST00000547392 TNNQ9UQP3 1299 aa27.69■■■□□ 2.02
CACNB3-205ENST00000547392 TRIM35Q9UPQ4 493 aa27.68■■■□□ 2.02
CACNB3-205ENST00000547392 ZKSCAN2Q63HK3 967 aa27.68■■■□□ 2.02
CACNB3-205ENST00000547392 CDC42BPGQ6DT37 1551 aa27.68■■■□□ 2.02
CACNB3-205ENST00000547392 CDK19Q9BWU1 502 aa27.67■■■□□ 2.02
CACNB3-205ENST00000547392 USP19O94966 1318 aa27.67■■■□□ 2.02
CACNB3-205ENST00000547392 MVPQ14764 893 aaKnown RBP27.67■■■□□ 2.02
CACNB3-205ENST00000547392 PNNQ9H307 717 aaKnown RBP27.67■■■□□ 2.02
CACNB3-205ENST00000547392 U2SURPO15042 1029 aaKnown RBP27.66■■■□□ 2.02
CACNB3-205ENST00000547392 BCL2L13Q9BXK5 485 aa27.66■■■□□ 2.02
CACNB3-205ENST00000547392 RWDD1Q9H446 243 aaPredicted RBP27.66■■■□□ 2.02
CACNB3-205ENST00000547392 SPATA31D1Q6ZQQ2 1576 aa27.64■■■□□ 2.02
CACNB3-205ENST00000547392 SETD1AO15047 1707 aaKnown RBP27.64■■■□□ 2.01
CACNB3-205ENST00000547392 DIAPH1O60610 1272 aaKnown RBP27.63■■■□□ 2.01
CACNB3-205ENST00000547392 A2ML1A8K2U0 1454 aa27.63■■■□□ 2.01
CACNB3-205ENST00000547392 ATP7BP35670 1465 aa27.63■■■□□ 2.01
CACNB3-205ENST00000547392 SLC4A3P48751 1232 aa27.63■■■□□ 2.01
CACNB3-205ENST00000547392 DZIP1LQ8IYY4 767 aaKnown RBP27.63■■■□□ 2.01
CACNB3-205ENST00000547392 EXOSC9Q06265 439 aaKnown RBP27.61■■■□□ 2.01
CACNB3-205ENST00000547392 MLECQ14165 292 aa27.61■■■□□ 2.01
CACNB3-205ENST00000547392 TSR2Q969E8 191 aaKnown RBP27.61■■■□□ 2.01
CACNB3-205ENST00000547392 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
CACNB3-205ENST00000547392 PDZRN3Q9UPQ7 1066 aa27.6■■■□□ 2.01
CACNB3-205ENST00000547392 CABP1Q9NZU7 370 aa27.6■■■□□ 2.01
CACNB3-205ENST00000547392 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
CACNB3-205ENST00000547392 NFKBIBQ15653 356 aa27.59■■■□□ 2.01
CACNB3-205ENST00000547392 FCHSD2O94868 740 aa27.57■■■□□ 2
CACNB3-205ENST00000547392 FTSJ3Q8IY81 847 aaKnown RBP27.57■■■□□ 2
CACNB3-205ENST00000547392 SMC4Q9NTJ3 1288 aa27.57■■■□□ 2
CACNB3-205ENST00000547392 RIMS2Q9UQ26 1411 aa27.57■■■□□ 2
CACNB3-205ENST00000547392 RIPK4P57078 832 aa27.56■■■□□ 2
CACNB3-205ENST00000547392 SSH1Q8WYL5 1049 aa27.55■■■□□ 2
CACNB3-205ENST00000547392 SEC24BO95487 1268 aa27.55■■■□□ 2
CACNB3-205ENST00000547392 TRIM27P14373 513 aa27.53■■■□□ 2
CACNB3-205ENST00000547392 LRRC7Q96NW7 1537 aa27.53■■■□□ 2
CACNB3-205ENST00000547392 ATF7IPQ6VMQ6 1270 aa27.53■■■□□ 2
CACNB3-205ENST00000547392 DDX19BQ9UMR2 479 aa27.53■■■□□ 2
CACNB3-205ENST00000547392 FAM135BQ49AJ0 1406 aa27.53■■■□□ 2
CACNB3-205ENST00000547392 HDAC1Q13547 482 aaPredicted RBP27.52■■■□□ 2
CACNB3-205ENST00000547392 POLKQ9UBT6 870 aa27.5■■□□□ 1.99
CACNB3-205ENST00000547392 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
CACNB3-205ENST00000547392 PPIP5K1Q6PFW1 1433 aa27.5■■□□□ 1.99
CACNB3-205ENST00000547392 ALDH1L2Q3SY69 923 aa27.49■■□□□ 1.99
CACNB3-205ENST00000547392 RSPH6AQ9H0K4 717 aa27.49■■□□□ 1.99
CACNB3-205ENST00000547392 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
CACNB3-205ENST00000547392 KIF16BQ96L93 1317 aa27.49■■□□□ 1.99
CACNB3-205ENST00000547392 ZNF428Q96B54 188 aa27.48■■□□□ 1.99
CACNB3-205ENST00000547392 MAP2P11137 1827 aaKnown RBP27.48■■□□□ 1.99
CACNB3-205ENST00000547392 WAPLQ7Z5K2 1190 aa27.48■■□□□ 1.99
CACNB3-205ENST00000547392 EDC4Q6P2E9 1401 aaKnown RBP27.48■■□□□ 1.99
CACNB3-205ENST00000547392 IPO8O15397 1037 aaKnown RBP27.47■■□□□ 1.99
CACNB3-205ENST00000547392 BRPF1P55201 1214 aaPredicted RBP27.47■■□□□ 1.99
CACNB3-205ENST00000547392 NOB1Q9ULX3 412 aaKnown RBP27.47■■□□□ 1.99
CACNB3-205ENST00000547392 BECN1Q14457 450 aa27.47■■□□□ 1.99
CACNB3-205ENST00000547392 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.98
CACNB3-205ENST00000547392 TBC1D32Q96NH3 1257 aa27.45■■□□□ 1.98
CACNB3-205ENST00000547392 UPF2Q9HAU5 1272 aaKnown RBP27.45■■□□□ 1.98
CACNB3-205ENST00000547392 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.44■■□□□ 1.98
CACNB3-205ENST00000547392 SIRT1Q96EB6 747 aa27.44■■□□□ 1.98
CACNB3-205ENST00000547392 PRKAR2BP31323 418 aa27.43■■□□□ 1.98
CACNB3-205ENST00000547392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.43■■□□□ 1.98
CACNB3-205ENST00000547392 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
CACNB3-205ENST00000547392 CDK12Q9NYV4 1490 aaPredicted RBP27.43■■□□□ 1.98
CACNB3-205ENST00000547392 WASLO00401 505 aaPredicted RBP27.43■■□□□ 1.98
CACNB3-205ENST00000547392 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
CACNB3-205ENST00000547392 SMC5Q8IY18 1101 aa27.43■■□□□ 1.98
CACNB3-205ENST00000547392 ZBTB40Q9NUA8 1239 aa27.42■■□□□ 1.98
CACNB3-205ENST00000547392 GSE1Q14687 1217 aa27.41■■□□□ 1.98
CACNB3-205ENST00000547392 NFE2L2Q16236 605 aa27.41■■□□□ 1.98
CACNB3-205ENST00000547392 TMEM57Q8N5G2 664 aa27.41■■□□□ 1.98
CACNB3-205ENST00000547392 TECPR2O15040 1411 aa27.4■■□□□ 1.98
CACNB3-205ENST00000547392 MON2Q7Z3U7 1717 aa27.4■■□□□ 1.98
CACNB3-205ENST00000547392 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
CACNB3-205ENST00000547392 IL13P35225 146 aa27.38■■□□□ 1.97
CACNB3-205ENST00000547392 METP08581 1390 aa27.37■■□□□ 1.97
CACNB3-205ENST00000547392 AKAP12Q02952 1782 aa27.36■■□□□ 1.97
CACNB3-205ENST00000547392 CPS1P31327 1500 aa27.35■■□□□ 1.97
CACNB3-205ENST00000547392 ARHGAP45Q92619 1136 aa27.35■■□□□ 1.97
CACNB3-205ENST00000547392 FRAT2O75474 233 aaPredicted RBP27.34■■□□□ 1.97
CACNB3-205ENST00000547392 FBLN1P23142 703 aa27.34■■□□□ 1.97
CACNB3-205ENST00000547392 PHACTR3Q96KR7 559 aa27.34■■□□□ 1.97
CACNB3-205ENST00000547392 IFT57Q9NWB7 429 aa27.33■■□□□ 1.97
CACNB3-205ENST00000547392 PIK3R4Q99570 1358 aa27.33■■□□□ 1.97
CACNB3-205ENST00000547392 ZNF853P0CG23 659 aa27.33■■□□□ 1.97
CACNB3-205ENST00000547392 GNAI1P63096 354 aa27.32■■□□□ 1.96
CACNB3-205ENST00000547392 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
CACNB3-205ENST00000547392 EMILIN1Q9Y6C2 1016 aa27.32■■□□□ 1.96
CACNB3-205ENST00000547392 C3P01024 1663 aa27.32■■□□□ 1.96
CACNB3-205ENST00000547392 PTCH1Q13635 1447 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms