RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 PLEKHF1Q96S99 279 aa23.62■■□□□ 1.37
GRAMD2B-219ENST00000544396 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
GRAMD2B-219ENST00000544396 CHD1LQ86WJ1 897 aa23.61■■□□□ 1.37
GRAMD2B-219ENST00000544396 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
GRAMD2B-219ENST00000544396 SAFB2Q14151 953 aaKnown RBP eCLIP23.6■■□□□ 1.37
GRAMD2B-219ENST00000544396 GBP4Q96PP9 640 aa23.6■■□□□ 1.37
GRAMD2B-219ENST00000544396 CABP2Q9NPB3 220 aa23.6■■□□□ 1.37
GRAMD2B-219ENST00000544396 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
GRAMD2B-219ENST00000544396 SSFA2P28290 1259 aa23.59■■□□□ 1.37
GRAMD2B-219ENST00000544396 C1orf115Q9H7X2 142 aa23.59■■□□□ 1.37
GRAMD2B-219ENST00000544396 KIAA1211Q6ZU35 1233 aa23.59■■□□□ 1.37
GRAMD2B-219ENST00000544396 ISY1Q9ULR0 285 aaKnown RBP23.59■■□□□ 1.37
GRAMD2B-219ENST00000544396 GGNBP2Q9H3C7 697 aa23.58■■□□□ 1.37
GRAMD2B-219ENST00000544396 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
GRAMD2B-219ENST00000544396 ANKRD45Q5TZF3 282 aa23.58■■□□□ 1.36
GRAMD2B-219ENST00000544396 DEPDC5O75140 1603 aa23.58■■□□□ 1.36
GRAMD2B-219ENST00000544396 CIZ1Q9ULV3 898 aaPredicted RBP23.57■■□□□ 1.36
GRAMD2B-219ENST00000544396 RIPK4P57078 832 aa23.57■■□□□ 1.36
GRAMD2B-219ENST00000544396 FGD1P98174 961 aa23.56■■□□□ 1.36
GRAMD2B-219ENST00000544396 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
GRAMD2B-219ENST00000544396 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
GRAMD2B-219ENST00000544396 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
GRAMD2B-219ENST00000544396 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
GRAMD2B-219ENST00000544396 MROH2AA6NES4 1674 aa23.55■■□□□ 1.36
GRAMD2B-219ENST00000544396 NCBP3Q53F19 620 aaKnown RBP23.54■■□□□ 1.36
GRAMD2B-219ENST00000544396 TBC1D9Q6ZT07 1266 aa23.54■■□□□ 1.36
GRAMD2B-219ENST00000544396 BMP2KLQ5H9B9 411 aa23.53■■□□□ 1.36
GRAMD2B-219ENST00000544396 K7ELQ4 463 aaPredicted RBP23.52■■□□□ 1.36
GRAMD2B-219ENST00000544396 SKOR2Q2VWA4 1001 aaPredicted RBP23.52■■□□□ 1.36
GRAMD2B-219ENST00000544396 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
GRAMD2B-219ENST00000544396 IPO8O15397 1037 aaKnown RBP23.51■■□□□ 1.35
GRAMD2B-219ENST00000544396 ARID3AQ99856 593 aa23.51■■□□□ 1.35
GRAMD2B-219ENST00000544396 ATP7AQ04656 1500 aa23.51■■□□□ 1.35
GRAMD2B-219ENST00000544396 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
GRAMD2B-219ENST00000544396 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
GRAMD2B-219ENST00000544396 NASPP49321 788 aaPredicted RBP23.5■■□□□ 1.35
GRAMD2B-219ENST00000544396 EVC2Q86UK5 1308 aa23.5■■□□□ 1.35
GRAMD2B-219ENST00000544396 KIF16BQ96L93 1317 aa23.5■■□□□ 1.35
GRAMD2B-219ENST00000544396 QRICH2Q9H0J4 1663 aa23.5■■□□□ 1.35
GRAMD2B-219ENST00000544396 KIF1BO60333 1816 aa23.49■■□□□ 1.35
GRAMD2B-219ENST00000544396 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
GRAMD2B-219ENST00000544396 DDX49Q9Y6V7 483 aaKnown RBP23.48■■□□□ 1.35
GRAMD2B-219ENST00000544396 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
GRAMD2B-219ENST00000544396 ADGRL1O94910 1474 aa23.48■■□□□ 1.35
GRAMD2B-219ENST00000544396 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
GRAMD2B-219ENST00000544396 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
GRAMD2B-219ENST00000544396 ABCC11Q96J66 1382 aa23.47■■□□□ 1.35
GRAMD2B-219ENST00000544396 ZBTB7BO15156 539 aaPredicted RBP23.47■■□□□ 1.35
GRAMD2B-219ENST00000544396 FAM13BQ9NYF5 915 aa23.47■■□□□ 1.35
GRAMD2B-219ENST00000544396 ADGRB1O14514 1584 aa23.47■■□□□ 1.35
GRAMD2B-219ENST00000544396 BAG4O95429 457 aaKnown RBP23.46■■□□□ 1.35
GRAMD2B-219ENST00000544396 SIRT2Q8IXJ6 389 aa23.46■■□□□ 1.35
GRAMD2B-219ENST00000544396 CHD1O14646 1710 aa23.46■■□□□ 1.35
GRAMD2B-219ENST00000544396 ELL2O00472 640 aaPredicted RBP23.45■■□□□ 1.34
GRAMD2B-219ENST00000544396 CCDC173Q0VFZ6 552 aa23.45■■□□□ 1.34
GRAMD2B-219ENST00000544396 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
GRAMD2B-219ENST00000544396 IL16Q14005 1332 aa23.45■■□□□ 1.34
GRAMD2B-219ENST00000544396 PPP1R9BQ96SB3 815 aa23.45■■□□□ 1.34
GRAMD2B-219ENST00000544396 FBLN1P23142 703 aa23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 A0A1W2PP64 1363 aa23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 NCLP19338 710 aaKnown RBP23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 STK26Q9P289 416 aa23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 EFCAB6Q5THR3 1501 aa23.44■■□□□ 1.34
GRAMD2B-219ENST00000544396 NSD2O96028 1365 aa23.43■■□□□ 1.34
GRAMD2B-219ENST00000544396 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
GRAMD2B-219ENST00000544396 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
GRAMD2B-219ENST00000544396 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 SRPK2P78362 688 aaKnown RBP23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 ZSCAN30Q86W11 494 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 TSPYL6Q8N831 410 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 FANCAO15360 1455 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 FYB1O15117 783 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 KLHL40Q2TBA0 621 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 MCTP1Q6DN14 999 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 GGT6Q6P531 493 aa23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 ZHX1Q9UKY1 873 aaPredicted RBP23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
GRAMD2B-219ENST00000544396 GOLGA6L22H0YM25 854 aa23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 PKP1Q13835 747 aa23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 ALDH1L2Q3SY69 923 aa23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 ADGRB3O60242 1522 aa23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 GCC1Q96CN9 775 aa23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 INO80Q9ULG1 1556 aaPredicted RBP23.41■■□□□ 1.34
GRAMD2B-219ENST00000544396 DIAPH1O60610 1272 aaKnown RBP23.4■■□□□ 1.34
GRAMD2B-219ENST00000544396 PTMSP20962 102 aa23.4■■□□□ 1.34
GRAMD2B-219ENST00000544396 CAVIN1Q6NZI2 390 aaKnown RBP23.4■■□□□ 1.34
GRAMD2B-219ENST00000544396 PRDM10Q9NQV6 1147 aa23.4■■□□□ 1.34
GRAMD2B-219ENST00000544396 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
GRAMD2B-219ENST00000544396 GSPT1P15170 499 aaKnown RBP23.39■■□□□ 1.34
GRAMD2B-219ENST00000544396 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 CFAP74Q9C0B2 1584 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 VAMP4O75379 141 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 CDC45O75419 566 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 PRKAR2BP31323 418 aa23.37■■□□□ 1.33
GRAMD2B-219ENST00000544396 PDE4CQ08493 712 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 291.9 ms