RNA–Protein interactions for RNA: ENST00000544244.5

PTPRO-210, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 3,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-210ENST00000544244 PPIP5K1Q6PFW1 1433 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 ACEP12821 1306 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 FOXO3O43524 673 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 NUDCQ9Y266 331 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 NLRP6P59044 892 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 ABTB2Q8N961 1025 aa7.6□□□□□ -1.19
PTPRO-210ENST00000544244 KRT28Q7Z3Y7 464 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 YTHDC1Q96MU7 727 aaKnown RBP7.59□□□□□ -1.19
PTPRO-210ENST00000544244 GGNBP2Q9H3C7 697 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 SLAIN2Q9P270 581 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 ADGRL3Q9HAR2 1447 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 PLEKHG3A1L390 1219 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 IFT172Q9UG01 1749 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 NKTRP30414 1462 aaKnown RBP7.59□□□□□ -1.19
PTPRO-210ENST00000544244 IQGAP1P46940 1657 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 NPHP3Q7Z494 1330 aa7.59□□□□□ -1.19
PTPRO-210ENST00000544244 NLRP13Q86W25 1043 aa7.59□□□□□ -1.2
PTPRO-210ENST00000544244 NSD3Q9BZ95 1437 aa7.59□□□□□ -1.2
PTPRO-210ENST00000544244 NCOA3Q9Y6Q9 1424 aa7.58□□□□□ -1.2
PTPRO-210ENST00000544244 XPCQ01831 940 aaPredicted RBP7.58□□□□□ -1.2
PTPRO-210ENST00000544244 PRKRIP1Q9H875 184 aaPredicted RBP7.58□□□□□ -1.2
PTPRO-210ENST00000544244 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
PTPRO-210ENST00000544244 NBR1Q14596 966 aa7.58□□□□□ -1.2
PTPRO-210ENST00000544244 TMEM132AQ24JP5 1023 aa7.58□□□□□ -1.2
PTPRO-210ENST00000544244 AMPHP49418 695 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 FAM9BQ8IZU0 186 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 ORAI2Q96SN7 254 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 MYBBP1AQ9BQG0 1328 aaKnown RBP7.57□□□□□ -1.2
PTPRO-210ENST00000544244 ANKARQ7Z5J8 1434 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 NUTM2GQ5VZR2 741 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 TTC21AQ8NDW8 1320 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 ASXL1Q8IXJ9 1541 aa7.57□□□□□ -1.2
PTPRO-210ENST00000544244 TTC21BQ7Z4L5 1316 aa7.56□□□□□ -1.2
PTPRO-210ENST00000544244 NSD2O96028 1365 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 CPS1P31327 1500 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 PRR36Q9H6K5 1346 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 NME9Q86XW9 330 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 KLHL34Q8N239 644 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
PTPRO-210ENST00000544244 CENPBP07199 599 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-210ENST00000544244 KCNH5Q8NCM2 988 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 PNNQ9H307 717 aaKnown RBP7.55□□□□□ -1.2
PTPRO-210ENST00000544244 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
PTPRO-210ENST00000544244 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
PTPRO-210ENST00000544244 QRICH2Q9H0J4 1663 aa7.54□□□□□ -1.2
PTPRO-210ENST00000544244 POLR1AO95602 1720 aaPredicted RBP7.54□□□□□ -1.2
PTPRO-210ENST00000544244 CSB-PGBD3P0DP91 1061 aa7.54□□□□□ -1.2
PTPRO-210ENST00000544244 CARD14Q9BXL6 1004 aa7.54□□□□□ -1.2
PTPRO-210ENST00000544244 BRD4O60885 1362 aaPredicted RBP7.54□□□□□ -1.2
PTPRO-210ENST00000544244 TULP4Q9NRJ4 1543 aa7.54□□□□□ -1.2
PTPRO-210ENST00000544244 EDC4Q6P2E9 1401 aaKnown RBP7.53□□□□□ -1.2
PTPRO-210ENST00000544244 NRXN3Q9Y4C0 1643 aa7.53□□□□□ -1.2
PTPRO-210ENST00000544244 FYB1O15117 783 aa7.53□□□□□ -1.2
PTPRO-210ENST00000544244 LRRC59Q96AG4 307 aaKnown RBP7.53□□□□□ -1.2
PTPRO-210ENST00000544244 PPP2R1AP30153 589 aa7.53□□□□□ -1.2
PTPRO-210ENST00000544244 DCCP43146 1447 aa7.53□□□□□ -1.2
PTPRO-210ENST00000544244 ATP7BP35670 1465 aa7.53□□□□□ -1.2
PTPRO-210ENST00000544244 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-210ENST00000544244 MTHFSP49914 203 aa7.52□□□□□ -1.21
PTPRO-210ENST00000544244 C1orf167Q5SNV9 1468 aa7.52□□□□□ -1.21
PTPRO-210ENST00000544244 U2AF1L5P0DN76 240 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-210ENST00000544244 U2AF1Q01081 240 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRO-210ENST00000544244 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
PTPRO-210ENST00000544244 ARHGEF28Q8N1W1 1705 aaKnown RBP7.52□□□□□ -1.21
PTPRO-210ENST00000544244 LTV1Q96GA3 475 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-210ENST00000544244 NPC1L1Q9UHC9 1359 aa7.51□□□□□ -1.21
PTPRO-210ENST00000544244 MAPK8IP3Q9UPT6 1336 aa7.51□□□□□ -1.21
PTPRO-210ENST00000544244 DIAPH1O60610 1272 aaKnown RBP7.51□□□□□ -1.21
PTPRO-210ENST00000544244 EVA1CP58658 441 aa7.51□□□□□ -1.21
PTPRO-210ENST00000544244 MEX3CQ5U5Q3 659 aaKnown RBP7.51□□□□□ -1.21
PTPRO-210ENST00000544244 LRRC7Q96NW7 1537 aa7.51□□□□□ -1.21
PTPRO-210ENST00000544244 SPOCK2Q92563 424 aa7.51□□□□□ -1.21
PTPRO-210ENST00000544244 ARHGEF10O15013 1369 aa7.5□□□□□ -1.21
PTPRO-210ENST00000544244 NUTM2BA6NNL0 878 aaPredicted RBP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 NUTM2EB1AL46 878 aaPredicted RBP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 HNRNPUQ00839 825 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 NUTM2AQ8IVF1 878 aaPredicted RBP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 PRDM11Q9NQV5 511 aa7.5□□□□□ -1.21
PTPRO-210ENST00000544244 DDX17Q92841 729 aaKnown RBP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 KNDC1Q76NI1 1749 aa7.5□□□□□ -1.21
PTPRO-210ENST00000544244 USP6P35125 1406 aa7.5□□□□□ -1.21
PTPRO-210ENST00000544244 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
PTPRO-210ENST00000544244 ZRANB1Q9UGI0 708 aa7.49□□□□□ -1.21
PTPRO-210ENST00000544244 RRS1Q15050 365 aaKnown RBP7.49□□□□□ -1.21
PTPRO-210ENST00000544244 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
PTPRO-210ENST00000544244 CCDC9Q9Y3X0 531 aaKnown RBP7.49□□□□□ -1.21
PTPRO-210ENST00000544244 CDC42BPGQ6DT37 1551 aa7.49□□□□□ -1.21
PTPRO-210ENST00000544244 POLR3AO14802 1390 aaPredicted RBP7.48□□□□□ -1.21
PTPRO-210ENST00000544244 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
PTPRO-210ENST00000544244 CHD2O14647 1828 aaKnown RBP7.48□□□□□ -1.21
PTPRO-210ENST00000544244 NWD1Q149M9 1564 aa7.48□□□□□ -1.21
PTPRO-210ENST00000544244 MST1RQ04912 1400 aa7.48□□□□□ -1.21
PTPRO-210ENST00000544244 GCP02774 474 aa7.48□□□□□ -1.21
PTPRO-210ENST00000544244 SALL2Q9Y467 1007 aaPredicted RBP7.48□□□□□ -1.21
PTPRO-210ENST00000544244 CPSF1Q10570 1443 aaKnown RBP7.47□□□□□ -1.21
PTPRO-210ENST00000544244 SMG6Q86US8 1419 aaKnown RBP7.47□□□□□ -1.21
PTPRO-210ENST00000544244 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
PTPRO-210ENST00000544244 SBNO1A3KN83 1393 aa7.47□□□□□ -1.21
PTPRO-210ENST00000544244 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms