RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 TTC21AQ8NDW8 1320 aa28.57■■■□□ 2.16
PGAM5-204ENST00000543955 MORC1Q86VD1 984 aa28.57■■■□□ 2.16
PGAM5-204ENST00000543955 NLRP13Q86W25 1043 aa28.57■■■□□ 2.16
PGAM5-204ENST00000543955 TTC21BQ7Z4L5 1316 aa28.56■■■□□ 2.16
PGAM5-204ENST00000543955 ORAI2Q96SN7 254 aa28.56■■■□□ 2.16
PGAM5-204ENST00000543955 GGNBP2Q9H3C7 697 aa28.54■■■□□ 2.16
PGAM5-204ENST00000543955 PIK3C2AO00443 1686 aa28.54■■■□□ 2.16
PGAM5-204ENST00000543955 USP54Q70EL1 1684 aa28.54■■■□□ 2.16
PGAM5-204ENST00000543955 MRS2Q9HD23 443 aa28.52■■■□□ 2.16
PGAM5-204ENST00000543955 PPP2R1AP30153 589 aa28.51■■■□□ 2.15
PGAM5-204ENST00000543955 TRPM3Q9HCF6 1732 aaPredicted RBP28.51■■■□□ 2.15
PGAM5-204ENST00000543955 NME9Q86XW9 330 aa28.5■■■□□ 2.15
PGAM5-204ENST00000543955 PSME1Q06323 249 aa28.49■■■□□ 2.15
PGAM5-204ENST00000543955 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
PGAM5-204ENST00000543955 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
PGAM5-204ENST00000543955 SLAIN2Q9P270 581 aa28.48■■■□□ 2.15
PGAM5-204ENST00000543955 COG3Q96JB2 828 aa28.47■■■□□ 2.15
PGAM5-204ENST00000543955 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
PGAM5-204ENST00000543955 FOXO3O43524 673 aa28.46■■■□□ 2.15
PGAM5-204ENST00000543955 USP31Q70CQ4 1352 aa28.45■■■□□ 2.15
PGAM5-204ENST00000543955 NPHP3Q7Z494 1330 aa28.45■■■□□ 2.14
PGAM5-204ENST00000543955 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
PGAM5-204ENST00000543955 CCDC184Q52MB2 194 aa28.45■■■□□ 2.14
PGAM5-204ENST00000543955 BRINP3Q76B58 766 aa28.43■■■□□ 2.14
PGAM5-204ENST00000543955 TNNT2P45379 298 aaPredicted RBP28.42■■■□□ 2.14
PGAM5-204ENST00000543955 NHSL1Q5SYE7 1610 aa28.42■■■□□ 2.14
PGAM5-204ENST00000543955 IQSEC2Q5JU85 1478 aa28.42■■■□□ 2.14
PGAM5-204ENST00000543955 MAP2P11137 1827 aaKnown RBP28.42■■■□□ 2.14
PGAM5-204ENST00000543955 PAK3O75914 559 aaPredicted RBP28.42■■■□□ 2.14
PGAM5-204ENST00000543955 ALS2Q96Q42 1657 aa28.42■■■□□ 2.14
PGAM5-204ENST00000543955 KRT28Q7Z3Y7 464 aa28.39■■■□□ 2.14
PGAM5-204ENST00000543955 AATKQ6ZMQ8 1374 aa28.39■■■□□ 2.14
PGAM5-204ENST00000543955 PXDNQ92626 1479 aa28.39■■■□□ 2.14
PGAM5-204ENST00000543955 ZRANB1Q9UGI0 708 aa28.39■■■□□ 2.13
PGAM5-204ENST00000543955 ABTB2Q8N961 1025 aa28.38■■■□□ 2.13
PGAM5-204ENST00000543955 SBNO1A3KN83 1393 aa28.37■■■□□ 2.13
PGAM5-204ENST00000543955 ROBO1Q9Y6N7 1651 aa28.37■■■□□ 2.13
PGAM5-204ENST00000543955 SMG6Q86US8 1419 aaKnown RBP28.36■■■□□ 2.13
PGAM5-204ENST00000543955 XPCQ01831 940 aaPredicted RBP28.35■■■□□ 2.13
PGAM5-204ENST00000543955 NLRP6P59044 892 aa28.34■■■□□ 2.13
PGAM5-204ENST00000543955 TNS3Q68CZ2 1445 aa28.33■■■□□ 2.13
PGAM5-204ENST00000543955 MTHFSP49914 203 aa28.32■■■□□ 2.12
PGAM5-204ENST00000543955 CFAP53Q96M91 514 aa28.32■■■□□ 2.12
PGAM5-204ENST00000543955 PNISRQ8TF01 805 aaKnown RBP28.32■■■□□ 2.12
PGAM5-204ENST00000543955 CDK12Q9NYV4 1490 aaPredicted RBP28.3■■■□□ 2.12
PGAM5-204ENST00000543955 SHPRHQ149N8 1683 aa28.3■■■□□ 2.12
PGAM5-204ENST00000543955 DDX17Q92841 729 aaKnown RBP28.29■■■□□ 2.12
PGAM5-204ENST00000543955 AHDC1Q5TGY3 1603 aaPredicted RBP28.29■■■□□ 2.12
PGAM5-204ENST00000543955 SLIT3O75094 1523 aa28.29■■■□□ 2.12
PGAM5-204ENST00000543955 FAM9BQ8IZU0 186 aa28.29■■■□□ 2.12
PGAM5-204ENST00000543955 SOS2Q07890 1332 aaPredicted RBP28.28■■■□□ 2.12
PGAM5-204ENST00000543955 TOM1O60784 492 aa28.28■■■□□ 2.12
PGAM5-204ENST00000543955 ARHGEF10O15013 1369 aa28.27■■■□□ 2.12
PGAM5-204ENST00000543955 MED1Q15648 1581 aaPredicted RBP28.27■■■□□ 2.12
PGAM5-204ENST00000543955 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
PGAM5-204ENST00000543955 POLKQ9UBT6 870 aa28.27■■■□□ 2.12
PGAM5-204ENST00000543955 COL3A1P02461 1466 aaPredicted RBP28.26■■■□□ 2.12
PGAM5-204ENST00000543955 LTN1O94822 1766 aa28.26■■■□□ 2.11
PGAM5-204ENST00000543955 NFAT5O94916 1531 aa28.26■■■□□ 2.11
PGAM5-204ENST00000543955 SPATA31A3Q5VYP0 1347 aa28.25■■■□□ 2.11
PGAM5-204ENST00000543955 PNPLA6Q8IY17 1366 aa28.25■■■□□ 2.11
PGAM5-204ENST00000543955 PHRF1Q9P1Y6 1649 aaKnown RBP28.25■■■□□ 2.11
PGAM5-204ENST00000543955 LMOD2Q6P5Q4 547 aa28.24■■■□□ 2.11
PGAM5-204ENST00000543955 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
PGAM5-204ENST00000543955 USP19O94966 1318 aa28.24■■■□□ 2.11
PGAM5-204ENST00000543955 INSRP06213 1382 aa28.24■■■□□ 2.11
PGAM5-204ENST00000543955 CRYBG1Q9Y4K1 1723 aa28.24■■■□□ 2.11
PGAM5-204ENST00000543955 KCNH5Q8NCM2 988 aa28.24■■■□□ 2.11
PGAM5-204ENST00000543955 WDR43Q15061 677 aaKnown RBP eCLIP28.23■■■□□ 2.11
PGAM5-204ENST00000543955 PEAK1Q9H792 1746 aa28.22■■■□□ 2.11
PGAM5-204ENST00000543955 RRS1Q15050 365 aaKnown RBP28.22■■■□□ 2.11
PGAM5-204ENST00000543955 EMILIN1Q9Y6C2 1016 aa28.22■■■□□ 2.11
PGAM5-204ENST00000543955 FBLN1P23142 703 aa28.21■■■□□ 2.11
PGAM5-204ENST00000543955 KIF24Q5T7B8 1368 aa28.21■■■□□ 2.11
PGAM5-204ENST00000543955 PPM1GO15355 546 aaPredicted RBP28.19■■■□□ 2.1
PGAM5-204ENST00000543955 SOX12O15370 315 aa28.19■■■□□ 2.1
PGAM5-204ENST00000543955 CERKQ8TCT0 537 aa28.19■■■□□ 2.1
PGAM5-204ENST00000543955 PHLPP1O60346 1717 aa28.19■■■□□ 2.1
PGAM5-204ENST00000543955 FLT4P35916 1363 aa28.17■■■□□ 2.1
PGAM5-204ENST00000543955 RTL1A6NKG5 1358 aa28.17■■■□□ 2.1
PGAM5-204ENST00000543955 MAP3K19Q56UN5 1328 aa28.17■■■□□ 2.1
PGAM5-204ENST00000543955 ABCA3Q99758 1704 aa28.16■■■□□ 2.1
PGAM5-204ENST00000543955 UBAP1LF5GYI3 381 aa28.16■■■□□ 2.1
PGAM5-204ENST00000543955 NUDCQ9Y266 331 aa28.15■■■□□ 2.1
PGAM5-204ENST00000543955 BLMP54132 1417 aaPredicted RBP28.15■■■□□ 2.1
PGAM5-204ENST00000543955 DIAPH1O60610 1272 aaKnown RBP28.14■■■□□ 2.1
PGAM5-204ENST00000543955 GCP02774 474 aa28.14■■■□□ 2.09
PGAM5-204ENST00000543955 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
PGAM5-204ENST00000543955 ADAMTS8Q9UP79 889 aa28.11■■■□□ 2.09
PGAM5-204ENST00000543955 AMPHP49418 695 aa28.11■■■□□ 2.09
PGAM5-204ENST00000543955 COL22A1Q8NFW1 1626 aaPredicted RBP28.11■■■□□ 2.09
PGAM5-204ENST00000543955 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
PGAM5-204ENST00000543955 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
PGAM5-204ENST00000543955 ABCC6O95255 1503 aa28.09■■■□□ 2.09
PGAM5-204ENST00000543955 HNRNPUQ00839 825 aaKnown RBP eCLIP28.08■■■□□ 2.09
PGAM5-204ENST00000543955 RGPD1P0DJD0 1748 aa28.06■■■□□ 2.08
PGAM5-204ENST00000543955 HOXC9P31274 260 aa28.06■■■□□ 2.08
PGAM5-204ENST00000543955 PLEKHG5O94827 1062 aa28.05■■■□□ 2.08
PGAM5-204ENST00000543955 IL13P35225 146 aa28.05■■■□□ 2.08
PGAM5-204ENST00000543955 ARHGEF25Q86VW2 580 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms