RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 IGHDP01880 384 aa24■■□□□ 1.43
COPS7A-215ENST00000543155 RGS3P49796 1198 aa24■■□□□ 1.43
COPS7A-215ENST00000543155 CDC42BPGQ6DT37 1551 aa23.99■■□□□ 1.43
COPS7A-215ENST00000543155 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
COPS7A-215ENST00000543155 NRXN3Q9Y4C0 1643 aa23.98■■□□□ 1.43
COPS7A-215ENST00000543155 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
COPS7A-215ENST00000543155 PNPLA6Q8IY17 1366 aa23.97■■□□□ 1.43
COPS7A-215ENST00000543155 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
COPS7A-215ENST00000543155 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
COPS7A-215ENST00000543155 PMFBP1Q8TBY8 1022 aa23.95■■□□□ 1.42
COPS7A-215ENST00000543155 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
COPS7A-215ENST00000543155 RTL5Q5HYW3 569 aaPredicted RBP23.94■■□□□ 1.42
COPS7A-215ENST00000543155 PNNQ9H307 717 aaKnown RBP23.94■■□□□ 1.42
COPS7A-215ENST00000543155 KNDC1Q76NI1 1749 aa23.94■■□□□ 1.42
COPS7A-215ENST00000543155 IL16Q14005 1332 aa23.93■■□□□ 1.42
COPS7A-215ENST00000543155 RLBP1P12271 317 aa23.93■■□□□ 1.42
COPS7A-215ENST00000543155 BCL2L13Q9BXK5 485 aa23.93■■□□□ 1.42
COPS7A-215ENST00000543155 TRIM35Q9UPQ4 493 aa23.92■■□□□ 1.42
COPS7A-215ENST00000543155 WAPLQ7Z5K2 1190 aa23.91■■□□□ 1.42
COPS7A-215ENST00000543155 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
COPS7A-215ENST00000543155 TNNQ9UQP3 1299 aa23.9■■□□□ 1.42
COPS7A-215ENST00000543155 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
COPS7A-215ENST00000543155 MLECQ14165 292 aa23.9■■□□□ 1.42
COPS7A-215ENST00000543155 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.9■■□□□ 1.42
COPS7A-215ENST00000543155 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.42
COPS7A-215ENST00000543155 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.42
COPS7A-215ENST00000543155 TSR2Q969E8 191 aaKnown RBP23.89■■□□□ 1.42
COPS7A-215ENST00000543155 PPM1GO15355 546 aaPredicted RBP23.87■■□□□ 1.41
COPS7A-215ENST00000543155 MAP2P11137 1827 aaKnown RBP23.87■■□□□ 1.41
COPS7A-215ENST00000543155 EXOSC9Q06265 439 aaKnown RBP23.87■■□□□ 1.41
COPS7A-215ENST00000543155 MVPQ14764 893 aaKnown RBP23.87■■□□□ 1.41
COPS7A-215ENST00000543155 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
COPS7A-215ENST00000543155 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
COPS7A-215ENST00000543155 PCDHB15Q9Y5E8 787 aa23.86■■□□□ 1.41
COPS7A-215ENST00000543155 ZMYM3Q14202 1370 aa23.86■■□□□ 1.41
COPS7A-215ENST00000543155 RIPK4P57078 832 aa23.86■■□□□ 1.41
COPS7A-215ENST00000543155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
COPS7A-215ENST00000543155 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
COPS7A-215ENST00000543155 FAM135BQ49AJ0 1406 aa23.85■■□□□ 1.41
COPS7A-215ENST00000543155 PPIP5K1Q6PFW1 1433 aa23.85■■□□□ 1.41
COPS7A-215ENST00000543155 MON2Q7Z3U7 1717 aa23.85■■□□□ 1.41
COPS7A-215ENST00000543155 FCHSD2O94868 740 aa23.85■■□□□ 1.41
COPS7A-215ENST00000543155 DZIP1LQ8IYY4 767 aaKnown RBP23.84■■□□□ 1.41
COPS7A-215ENST00000543155 SMC4Q9NTJ3 1288 aa23.84■■□□□ 1.41
COPS7A-215ENST00000543155 CPS1P31327 1500 aa23.84■■□□□ 1.41
COPS7A-215ENST00000543155 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
COPS7A-215ENST00000543155 TECPR2O15040 1411 aa23.84■■□□□ 1.41
COPS7A-215ENST00000543155 METP08581 1390 aa23.83■■□□□ 1.41
COPS7A-215ENST00000543155 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
COPS7A-215ENST00000543155 RWDD1Q9H446 243 aaPredicted RBP23.83■■□□□ 1.41
COPS7A-215ENST00000543155 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
COPS7A-215ENST00000543155 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
COPS7A-215ENST00000543155 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
COPS7A-215ENST00000543155 ITSN1Q15811 1721 aa23.82■■□□□ 1.4
COPS7A-215ENST00000543155 AKAP12Q02952 1782 aa23.82■■□□□ 1.4
COPS7A-215ENST00000543155 DAXXQ9UER7 740 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-215ENST00000543155 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
COPS7A-215ENST00000543155 CDK12Q9NYV4 1490 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-215ENST00000543155 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
COPS7A-215ENST00000543155 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
COPS7A-215ENST00000543155 HDGFP51858 240 aaKnown RBP23.8■■□□□ 1.4
COPS7A-215ENST00000543155 SSH1Q8WYL5 1049 aa23.8■■□□□ 1.4
COPS7A-215ENST00000543155 NEFMP07197 916 aa23.79■■□□□ 1.4
COPS7A-215ENST00000543155 TNRQ92752 1358 aa23.78■■□□□ 1.4
COPS7A-215ENST00000543155 C3P01024 1663 aa23.78■■□□□ 1.4
COPS7A-215ENST00000543155 AATKQ6ZMQ8 1374 aa23.77■■□□□ 1.4
COPS7A-215ENST00000543155 TRIM27P14373 513 aa23.77■■□□□ 1.4
COPS7A-215ENST00000543155 PRKAR2BP31323 418 aa23.77■■□□□ 1.4
COPS7A-215ENST00000543155 ATF7IPQ6VMQ6 1270 aa23.77■■□□□ 1.4
COPS7A-215ENST00000543155 PDZRN3Q9UPQ7 1066 aa23.77■■□□□ 1.4
COPS7A-215ENST00000543155 TXNDC2Q86VQ3 553 aa23.76■■□□□ 1.39
COPS7A-215ENST00000543155 KIF16BQ96L93 1317 aa23.76■■□□□ 1.39
COPS7A-215ENST00000543155 DDX19BQ9UMR2 479 aa23.75■■□□□ 1.39
COPS7A-215ENST00000543155 NUDT16Q96DE0 195 aaKnown RBP23.75■■□□□ 1.39
COPS7A-215ENST00000543155 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
COPS7A-215ENST00000543155 NME9Q86XW9 330 aa23.74■■□□□ 1.39
COPS7A-215ENST00000543155 FBLN1P23142 703 aa23.73■■□□□ 1.39
COPS7A-215ENST00000543155 NFE2L2Q16236 605 aa23.73■■□□□ 1.39
COPS7A-215ENST00000543155 NOB1Q9ULX3 412 aaKnown RBP23.73■■□□□ 1.39
COPS7A-215ENST00000543155 USP19O94966 1318 aa23.73■■□□□ 1.39
COPS7A-215ENST00000543155 SLC4A3P48751 1232 aa23.72■■□□□ 1.39
COPS7A-215ENST00000543155 EMILIN1Q9Y6C2 1016 aa23.72■■□□□ 1.39
COPS7A-215ENST00000543155 TMEM2Q9UHN6 1383 aa23.72■■□□□ 1.39
COPS7A-215ENST00000543155 CCDC61Q9Y6R9 512 aa23.72■■□□□ 1.39
COPS7A-215ENST00000543155 IPO8O15397 1037 aaKnown RBP23.71■■□□□ 1.39
COPS7A-215ENST00000543155 CALD1Q05682 793 aaKnown RBP23.71■■□□□ 1.39
COPS7A-215ENST00000543155 ITPRIPQ8IWB1 547 aa23.71■■□□□ 1.39
COPS7A-215ENST00000543155 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
COPS7A-215ENST00000543155 IL13P35225 146 aa23.71■■□□□ 1.39
COPS7A-215ENST00000543155 ZNF428Q96B54 188 aa23.71■■□□□ 1.39
COPS7A-215ENST00000543155 HDAC1Q13547 482 aaPredicted RBP23.7■■□□□ 1.38
COPS7A-215ENST00000543155 COG3Q96JB2 828 aa23.7■■□□□ 1.38
COPS7A-215ENST00000543155 TOPAZ1Q8N9V7 1692 aa23.69■■□□□ 1.38
COPS7A-215ENST00000543155 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
COPS7A-215ENST00000543155 HMOX1P09601 288 aa23.69■■□□□ 1.38
COPS7A-215ENST00000543155 DLG5Q8TDM6 1919 aa23.68■■□□□ 1.38
COPS7A-215ENST00000543155 PHACTR3Q96KR7 559 aa23.68■■□□□ 1.38
COPS7A-215ENST00000543155 SEC24BO95487 1268 aa23.67■■□□□ 1.38
COPS7A-215ENST00000543155 BRPF1P55201 1214 aaPredicted RBP23.67■■□□□ 1.38
COPS7A-215ENST00000543155 TMEM57Q8N5G2 664 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms