RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.09■■□□□ 1.93
LSM14A-202ENST00000540746 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.09■■□□□ 1.93
LSM14A-202ENST00000540746 TMPOP42166 694 aaKnown RBP27.08■■□□□ 1.93
LSM14A-202ENST00000540746 MYH16Q9H6N6 1097 aa27.08■■□□□ 1.93
LSM14A-202ENST00000540746 IGHDP01880 384 aa27.08■■□□□ 1.93
LSM14A-202ENST00000540746 FBLN1P23142 703 aa27.08■■□□□ 1.93
LSM14A-202ENST00000540746 TRIM35Q9UPQ4 493 aa27.08■■□□□ 1.93
LSM14A-202ENST00000540746 BCL2L13Q9BXK5 485 aa27.07■■□□□ 1.92
LSM14A-202ENST00000540746 TXNDC2Q86VQ3 553 aa27.07■■□□□ 1.92
LSM14A-202ENST00000540746 TNNQ9UQP3 1299 aa27.07■■□□□ 1.92
LSM14A-202ENST00000540746 DIAPH1O60610 1272 aaKnown RBP27.06■■□□□ 1.92
LSM14A-202ENST00000540746 WASLO00401 505 aaPredicted RBP27.05■■□□□ 1.92
LSM14A-202ENST00000540746 ZBTB47Q9UFB7 747 aaPredicted RBP27.05■■□□□ 1.92
LSM14A-202ENST00000540746 RLBP1P12271 317 aa27.05■■□□□ 1.92
LSM14A-202ENST00000540746 CLUAP1Q96AJ1 413 aa27.05■■□□□ 1.92
LSM14A-202ENST00000540746 TSR2Q969E8 191 aaKnown RBP27.04■■□□□ 1.92
LSM14A-202ENST00000540746 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
LSM14A-202ENST00000540746 TNRQ92752 1358 aa27.04■■□□□ 1.92
LSM14A-202ENST00000540746 POLKQ9UBT6 870 aa27.03■■□□□ 1.92
LSM14A-202ENST00000540746 MAP2P11137 1827 aaKnown RBP27.03■■□□□ 1.92
LSM14A-202ENST00000540746 KNDC1Q76NI1 1749 aa27.02■■□□□ 1.92
LSM14A-202ENST00000540746 PPIP5K1Q6PFW1 1433 aa27.02■■□□□ 1.92
LSM14A-202ENST00000540746 MAPK8IP3Q9UPT6 1336 aa27.02■■□□□ 1.92
LSM14A-202ENST00000540746 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
LSM14A-202ENST00000540746 TECPR2O15040 1411 aa27.01■■□□□ 1.91
LSM14A-202ENST00000540746 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.91
LSM14A-202ENST00000540746 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
LSM14A-202ENST00000540746 RGS3P49796 1198 aa27■■□□□ 1.91
LSM14A-202ENST00000540746 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
LSM14A-202ENST00000540746 C8orf34Q49A92 452 aa26.99■■□□□ 1.91
LSM14A-202ENST00000540746 TMEM2Q9UHN6 1383 aa26.99■■□□□ 1.91
LSM14A-202ENST00000540746 EDC4Q6P2E9 1401 aaKnown RBP26.99■■□□□ 1.91
LSM14A-202ENST00000540746 LRRC7Q96NW7 1537 aa26.98■■□□□ 1.91
LSM14A-202ENST00000540746 PPM1GO15355 546 aaPredicted RBP26.98■■□□□ 1.91
LSM14A-202ENST00000540746 CPS1P31327 1500 aa26.98■■□□□ 1.91
LSM14A-202ENST00000540746 RIPK4P57078 832 aa26.97■■□□□ 1.91
LSM14A-202ENST00000540746 NUDT16Q96DE0 195 aaKnown RBP26.97■■□□□ 1.91
LSM14A-202ENST00000540746 EXOSC9Q06265 439 aaKnown RBP26.97■■□□□ 1.91
LSM14A-202ENST00000540746 NME9Q86XW9 330 aa26.97■■□□□ 1.91
LSM14A-202ENST00000540746 SIRT1Q96EB6 747 aa26.96■■□□□ 1.91
LSM14A-202ENST00000540746 HDGFP51858 240 aaKnown RBP26.95■■□□□ 1.91
LSM14A-202ENST00000540746 FAM161AQ3B820 660 aa26.95■■□□□ 1.91
LSM14A-202ENST00000540746 ZRANB1Q9UGI0 708 aa26.95■■□□□ 1.91
LSM14A-202ENST00000540746 FCHSD2O94868 740 aa26.95■■□□□ 1.9
LSM14A-202ENST00000540746 MON2Q7Z3U7 1717 aa26.94■■□□□ 1.9
LSM14A-202ENST00000540746 CT47B1P0C2W7 299 aaPredicted RBP26.94■■□□□ 1.9
LSM14A-202ENST00000540746 RSPH6AQ9H0K4 717 aa26.94■■□□□ 1.9
LSM14A-202ENST00000540746 EMILIN1Q9Y6C2 1016 aa26.94■■□□□ 1.9
LSM14A-202ENST00000540746 IL16Q14005 1332 aa26.94■■□□□ 1.9
LSM14A-202ENST00000540746 PCDHB15Q9Y5E8 787 aa26.93■■□□□ 1.9
LSM14A-202ENST00000540746 ADAMTS13Q76LX8 1427 aa26.93■■□□□ 1.9
LSM14A-202ENST00000540746 CCDC61Q9Y6R9 512 aa26.92■■□□□ 1.9
LSM14A-202ENST00000540746 ROBO2Q9HCK4 1378 aa26.92■■□□□ 1.9
LSM14A-202ENST00000540746 PRKAR2BP31323 418 aa26.91■■□□□ 1.9
LSM14A-202ENST00000540746 PNNQ9H307 717 aaKnown RBP26.91■■□□□ 1.9
LSM14A-202ENST00000540746 PRR36Q9H6K5 1346 aa26.91■■□□□ 1.9
LSM14A-202ENST00000540746 AKAP12Q02952 1782 aa26.9■■□□□ 1.9
LSM14A-202ENST00000540746 AAMPQ13685 434 aa26.9■■□□□ 1.9
LSM14A-202ENST00000540746 LTKP29376 864 aa26.89■■□□□ 1.9
LSM14A-202ENST00000540746 ZKSCAN2Q63HK3 967 aa26.89■■□□□ 1.9
LSM14A-202ENST00000540746 SSH1Q8WYL5 1049 aa26.88■■□□□ 1.89
LSM14A-202ENST00000540746 PHACTR3Q96KR7 559 aa26.88■■□□□ 1.89
LSM14A-202ENST00000540746 C3P01024 1663 aa26.88■■□□□ 1.89
LSM14A-202ENST00000540746 NBR1Q14596 966 aa26.87■■□□□ 1.89
LSM14A-202ENST00000540746 SMC4Q9NTJ3 1288 aa26.87■■□□□ 1.89
LSM14A-202ENST00000540746 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
LSM14A-202ENST00000540746 HMOX1P09601 288 aa26.87■■□□□ 1.89
LSM14A-202ENST00000540746 MVPQ14764 893 aaKnown RBP26.87■■□□□ 1.89
LSM14A-202ENST00000540746 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.86■■□□□ 1.89
LSM14A-202ENST00000540746 CDK12Q9NYV4 1490 aaPredicted RBP26.86■■□□□ 1.89
LSM14A-202ENST00000540746 IL13P35225 146 aa26.86■■□□□ 1.89
LSM14A-202ENST00000540746 AATKQ6ZMQ8 1374 aa26.86■■□□□ 1.89
LSM14A-202ENST00000540746 CEBPAP49715 358 aaPredicted RBP26.85■■□□□ 1.89
LSM14A-202ENST00000540746 DZIP1LQ8IYY4 767 aaKnown RBP26.85■■□□□ 1.89
LSM14A-202ENST00000540746 PMFBP1Q8TBY8 1022 aa26.85■■□□□ 1.89
LSM14A-202ENST00000540746 TRIM27P14373 513 aa26.84■■□□□ 1.89
LSM14A-202ENST00000540746 PLEKHG1Q9ULL1 1385 aa26.83■■□□□ 1.89
LSM14A-202ENST00000540746 COG3Q96JB2 828 aa26.83■■□□□ 1.89
LSM14A-202ENST00000540746 VIRMAQ69YN4 1812 aaKnown RBP26.83■■□□□ 1.89
LSM14A-202ENST00000540746 RRS1Q15050 365 aaKnown RBP26.82■■□□□ 1.88
LSM14A-202ENST00000540746 FTSJ3Q8IY81 847 aaKnown RBP26.82■■□□□ 1.88
LSM14A-202ENST00000540746 NFE2L2Q16236 605 aa26.8■■□□□ 1.88
LSM14A-202ENST00000540746 ZNF692Q9BU19 519 aaPredicted RBP26.8■■□□□ 1.88
LSM14A-202ENST00000540746 ATF7IPQ6VMQ6 1270 aa26.79■■□□□ 1.88
LSM14A-202ENST00000540746 NOB1Q9ULX3 412 aaKnown RBP26.79■■□□□ 1.88
LSM14A-202ENST00000540746 THUMPD2Q9BTF0 503 aaKnown RBP26.78■■□□□ 1.88
LSM14A-202ENST00000540746 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
LSM14A-202ENST00000540746 DDRGK1Q96HY6 314 aa26.78■■□□□ 1.88
LSM14A-202ENST00000540746 TOPAZ1Q8N9V7 1692 aa26.78■■□□□ 1.88
LSM14A-202ENST00000540746 NEFMP07197 916 aa26.77■■□□□ 1.88
LSM14A-202ENST00000540746 SLC26A8Q96RN1 970 aa26.77■■□□□ 1.88
LSM14A-202ENST00000540746 NRKQ7Z2Y5 1582 aa26.76■■□□□ 1.88
LSM14A-202ENST00000540746 DLG5Q8TDM6 1919 aa26.76■■□□□ 1.87
LSM14A-202ENST00000540746 NUTM2FA1L443 756 aa26.75■■□□□ 1.87
LSM14A-202ENST00000540746 RWDD1Q9H446 243 aaPredicted RBP26.75■■□□□ 1.87
LSM14A-202ENST00000540746 PDZRN3Q9UPQ7 1066 aa26.75■■□□□ 1.87
LSM14A-202ENST00000540746 LAS1LQ9Y4W2 734 aaKnown RBP26.74■■□□□ 1.87
LSM14A-202ENST00000540746 ACEP12821 1306 aa26.74■■□□□ 1.87
LSM14A-202ENST00000540746 TTC21BQ7Z4L5 1316 aa26.73■■□□□ 1.87
LSM14A-202ENST00000540746 ITPRIPQ8IWB1 547 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms