RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 GSE1Q14687 1217 aa9.3□□□□□ -0.92
KPNB1-203ENST00000540627 PMFBP1Q8TBY8 1022 aa9.29□□□□□ -0.92
KPNB1-203ENST00000540627 NPATQ14207 1427 aa9.29□□□□□ -0.92
KPNB1-203ENST00000540627 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
KPNB1-203ENST00000540627 RAD21O60216 631 aa9.29□□□□□ -0.92
KPNB1-203ENST00000540627 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 EVC2Q86UK5 1308 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 ADGRB1O14514 1584 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 MYH16Q9H6N6 1097 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 PPLO60437 1756 aa9.28□□□□□ -0.92
KPNB1-203ENST00000540627 CFAP65Q6ZU64 1925 aaKnown RBP9.28□□□□□ -0.92
KPNB1-203ENST00000540627 IQSEC2Q5JU85 1478 aa9.27□□□□□ -0.93
KPNB1-203ENST00000540627 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
KPNB1-203ENST00000540627 ZC3H13Q5T200 1668 aaKnown RBP9.27□□□□□ -0.93
KPNB1-203ENST00000540627 KIF13AQ9H1H9 1805 aa9.27□□□□□ -0.93
KPNB1-203ENST00000540627 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-203ENST00000540627 U2AF1L5P0DN76 240 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-203ENST00000540627 U2AF1Q01081 240 aaKnown RBP eCLIP9.27□□□□□ -0.939e-6■□□□□ 9.4
KPNB1-203ENST00000540627 USP32Q8NFA0 1604 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 NSD2O96028 1365 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
KPNB1-203ENST00000540627 BECN1Q14457 450 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 POGZQ7Z3K3 1410 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 ANKRD36BQ8N2N9 1353 aa9.26□□□□□ -0.93
KPNB1-203ENST00000540627 MLH3Q9UHC1 1453 aa9.25□□□□□ -0.93
KPNB1-203ENST00000540627 RWDD1Q9H446 243 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-203ENST00000540627 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
KPNB1-203ENST00000540627 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
KPNB1-203ENST00000540627 USP19O94966 1318 aa9.25□□□□□ -0.93
KPNB1-203ENST00000540627 CD109Q6YHK3 1445 aa9.25□□□□□ -0.93
KPNB1-203ENST00000540627 FRAT2O75474 233 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-203ENST00000540627 RLBP1P12271 317 aa9.25□□□□□ -0.93
KPNB1-203ENST00000540627 PCDHB15Q9Y5E8 787 aa9.25□□□□□ -0.93
KPNB1-203ENST00000540627 STK25O00506 426 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 NUTM2DQ5VT03 806 aaPredicted RBP9.24□□□□□ -0.93
KPNB1-203ENST00000540627 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 ABCC3O15438 1527 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 SEC24BO95487 1268 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 GLI2P10070 1586 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
KPNB1-203ENST00000540627 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
KPNB1-203ENST00000540627 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
KPNB1-203ENST00000540627 FTSJ3Q8IY81 847 aaKnown RBP9.23□□□□□ -0.93
KPNB1-203ENST00000540627 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
KPNB1-203ENST00000540627 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
KPNB1-203ENST00000540627 CT47B1P0C2W7 299 aaPredicted RBP9.23□□□□□ -0.93
KPNB1-203ENST00000540627 CDK11BP21127 795 aaKnown RBP9.23□□□□□ -0.93
KPNB1-203ENST00000540627 SAFB2Q14151 953 aaKnown RBP eCLIP9.23□□□□□ -0.93
KPNB1-203ENST00000540627 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
KPNB1-203ENST00000540627 MVPQ14764 893 aaKnown RBP9.22□□□□□ -0.93
KPNB1-203ENST00000540627 TULP4Q9NRJ4 1543 aa9.22□□□□□ -0.93
KPNB1-203ENST00000540627 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
KPNB1-203ENST00000540627 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
KPNB1-203ENST00000540627 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
KPNB1-203ENST00000540627 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
KPNB1-203ENST00000540627 ARHGEF28Q8N1W1 1705 aaKnown RBP9.21□□□□□ -0.94
KPNB1-203ENST00000540627 CAMSAP1Q5T5Y3 1602 aa9.21□□□□□ -0.94
KPNB1-203ENST00000540627 SMC4Q9NTJ3 1288 aa9.21□□□□□ -0.94
KPNB1-203ENST00000540627 STK26Q9P289 416 aa9.21□□□□□ -0.94
KPNB1-203ENST00000540627 CADPS2Q86UW7 1296 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 RGS22Q8NE09 1264 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 TSR2Q969E8 191 aaKnown RBP9.2□□□□□ -0.94
KPNB1-203ENST00000540627 WDR70Q9NW82 654 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 ABCC11Q96J66 1382 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 NEXMIFQ5QGS0 1516 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 ZMYND10O75800 440 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 TBC1D32Q96NH3 1257 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 SLKQ9H2G2 1235 aaPredicted RBP9.2□□□□□ -0.94
KPNB1-203ENST00000540627 GGNBP2Q9H3C7 697 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 BRPF3Q9ULD4 1205 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
KPNB1-203ENST00000540627 ADGRB2O60241 1585 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 DCAF8L1A6NGE4 600 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
KPNB1-203ENST00000540627 IDI1Q13907 227 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 NLRP1Q9C000 1473 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 SEMA3EO15041 775 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 RAPGEF3O95398 923 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 TMPOP42166 694 aaKnown RBP9.19□□□□□ -0.94
KPNB1-203ENST00000540627 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
KPNB1-203ENST00000540627 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 FOXD4L4Q8WXT5 416 aaPredicted RBP9.19□□□□□ -0.94
KPNB1-203ENST00000540627 SLC52A1Q9NWF4 448 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 PIK3C2BO00750 1634 aa9.19□□□□□ -0.94
KPNB1-203ENST00000540627 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 DDX19BQ9UMR2 479 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 SIGLEC1Q9BZZ2 1709 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
KPNB1-203ENST00000540627 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 TRIM27P14373 513 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 RBM25P49756 843 aaKnown RBP9.18□□□□□ -0.94
KPNB1-203ENST00000540627 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
KPNB1-203ENST00000540627 SSH1Q8WYL5 1049 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms