RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CLTCL1P53675 1640 aa9.25□□□□□ -0.93
SNHG1-212ENST00000539975 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-212ENST00000539975 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
SNHG1-212ENST00000539975 MED14O60244 1454 aa9.25□□□□□ -0.93
SNHG1-212ENST00000539975 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 SPATA31E1Q6ZUB1 1445 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 SLC34A2O95436 690 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 MFSD10Q14728 455 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 ZNF710Q8N1W2 664 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 KIF1BO60333 1816 aa9.23□□□□□ -0.93
SNHG1-212ENST00000539975 ST18O60284 1047 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 KCNA6P17658 529 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 DSG2Q14126 1118 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 PROSER2Q86WR7 435 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-212ENST00000539975 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
SNHG1-212ENST00000539975 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
SNHG1-212ENST00000539975 NEURL4Q96JN8 1562 aa9.21□□□□□ -0.93
SNHG1-212ENST00000539975 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
SNHG1-212ENST00000539975 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.94
SNHG1-212ENST00000539975 ADGRF5Q8IZF2 1346 aa9.21□□□□□ -0.94
SNHG1-212ENST00000539975 ZNF335Q9H4Z2 1342 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-212ENST00000539975 PIK3R4Q99570 1358 aa9.21□□□□□ -0.94
SNHG1-212ENST00000539975 AMOTL2Q9Y2J4 779 aa9.2□□□□□ -0.94
SNHG1-212ENST00000539975 C14orf93Q9H972 538 aaKnown RBP9.19□□□□□ -0.94
SNHG1-212ENST00000539975 STK26Q9P289 416 aa9.19□□□□□ -0.94
SNHG1-212ENST00000539975 NEXMIFQ5QGS0 1516 aa9.19□□□□□ -0.94
SNHG1-212ENST00000539975 IQGAP1P46940 1657 aa9.19□□□□□ -0.94
SNHG1-212ENST00000539975 POLR1AO95602 1720 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-212ENST00000539975 CFAP70Q5T0N1 1121 aa9.18□□□□□ -0.94
SNHG1-212ENST00000539975 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-212ENST00000539975 STRCQ7RTU9 1775 aa9.18□□□□□ -0.94
SNHG1-212ENST00000539975 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
SNHG1-212ENST00000539975 DIP2AQ14689 1571 aa9.17□□□□□ -0.94
SNHG1-212ENST00000539975 MYOM2P54296 1465 aa9.17□□□□□ -0.94
SNHG1-212ENST00000539975 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-212ENST00000539975 TMEM132EQ6IEE7 984 aa9.17□□□□□ -0.94
SNHG1-212ENST00000539975 POGKQ9P215 609 aa9.17□□□□□ -0.94
SNHG1-212ENST00000539975 CPS1P31327 1500 aa9.16□□□□□ -0.94
SNHG1-212ENST00000539975 TOM1O60784 492 aa9.16□□□□□ -0.94
SNHG1-212ENST00000539975 PTCD2Q8WV60 388 aaKnown RBP9.16□□□□□ -0.94
SNHG1-212ENST00000539975 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
SNHG1-212ENST00000539975 SETBP1Q9Y6X0 1596 aa9.16□□□□□ -0.94
SNHG1-212ENST00000539975 PIK3C2GO75747 1445 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 METP08581 1390 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 TBC1D12O60347 775 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 ATF3P18847 181 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 GPR153Q6NV75 609 aa9.15□□□□□ -0.94
SNHG1-212ENST00000539975 MSH6P52701 1360 aa9.14□□□□□ -0.95
SNHG1-212ENST00000539975 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
SNHG1-212ENST00000539975 TRAK1Q9UPV9 953 aa9.14□□□□□ -0.95
SNHG1-212ENST00000539975 ROCK2O75116 1388 aaKnown RBP9.13□□□□□ -0.95
SNHG1-212ENST00000539975 ALKQ9UM73 1620 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 MYO5BQ9ULV0 1848 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 CARD11Q9BXL7 1154 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 C19orf44Q9H6X5 657 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 PCDHGA4Q9Y5G9 962 aa9.13□□□□□ -0.95
SNHG1-212ENST00000539975 NKTRP30414 1462 aaKnown RBP9.13□□□□□ -0.95
SNHG1-212ENST00000539975 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
SNHG1-212ENST00000539975 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 PPLO60437 1756 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 SLC24A1O60721 1099 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
SNHG1-212ENST00000539975 NRXN1Q9ULB1 1477 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 PRAG1Q86YV5 1406 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 YTHDC2Q9H6S0 1430 aaKnown RBP9.12□□□□□ -0.95
SNHG1-212ENST00000539975 NCOA3Q9Y6Q9 1424 aa9.12□□□□□ -0.95
SNHG1-212ENST00000539975 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
SNHG1-212ENST00000539975 EMP3P54852 163 aa9.11□□□□□ -0.95
SNHG1-212ENST00000539975 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
SNHG1-212ENST00000539975 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
SNHG1-212ENST00000539975 PRAM1Q96QH2 718 aa9.11□□□□□ -0.95
SNHG1-212ENST00000539975 LAMC1P11047 1609 aa9.1□□□□□ -0.95
SNHG1-212ENST00000539975 POTEMA6NI47 508 aa9.1□□□□□ -0.95
SNHG1-212ENST00000539975 SAFB2Q14151 953 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNHG1-212ENST00000539975 NBPF1Q3BBV0 1214 aa9.1□□□□□ -0.95
SNHG1-212ENST00000539975 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
SNHG1-212ENST00000539975 WAPLQ7Z5K2 1190 aa9.1□□□□□ -0.95
SNHG1-212ENST00000539975 IQSEC2Q5JU85 1478 aa9.09□□□□□ -0.95
SNHG1-212ENST00000539975 ZEB1P37275 1124 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-212ENST00000539975 PIP4K2BP78356 416 aa9.09□□□□□ -0.95
SNHG1-212ENST00000539975 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
SNHG1-212ENST00000539975 PTCH1Q13635 1447 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 FAM135BQ49AJ0 1406 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 PTPRUQ92729 1446 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-212ENST00000539975 NBPF8Q3BBV2 869 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 FBXO41Q8TF61 875 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 LTBP4Q8N2S1 1624 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
SNHG1-212ENST00000539975 IFT172Q9UG01 1749 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms