RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 SBNO2Q9Y2G9 1366 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 TRAK1Q9UPV9 953 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 TRAK2O60296 914 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
NEK6-212ENST00000539416 PRDM4Q9UKN5 801 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 TMF1P82094 1093 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
NEK6-212ENST00000539416 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 GRPEL1Q9HAV7 217 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
NEK6-212ENST00000539416 METP08581 1390 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 KNDC1Q76NI1 1749 aa15.16■□□□□ 0.02
NEK6-212ENST00000539416 INSRP06213 1382 aa15.15■□□□□ 0.02
NEK6-212ENST00000539416 TPM2P07951 284 aa15.15■□□□□ 0.02
NEK6-212ENST00000539416 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
NEK6-212ENST00000539416 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
NEK6-212ENST00000539416 TECPR2O15040 1411 aa15.14■□□□□ 0.01
NEK6-212ENST00000539416 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
NEK6-212ENST00000539416 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
NEK6-212ENST00000539416 BCAR3O75815 825 aa15.13■□□□□ 0.01
NEK6-212ENST00000539416 CALD1Q05682 793 aaKnown RBP15.13■□□□□ 0.01
NEK6-212ENST00000539416 STK26Q9P289 416 aa15.13■□□□□ 0.01
NEK6-212ENST00000539416 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
NEK6-212ENST00000539416 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
NEK6-212ENST00000539416 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
NEK6-212ENST00000539416 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 CPS1P31327 1500 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 FAM135BQ49AJ0 1406 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
NEK6-212ENST00000539416 NPHP4O75161 1426 aaPredicted RBP15.1■□□□□ 0.01
NEK6-212ENST00000539416 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
NEK6-212ENST00000539416 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
NEK6-212ENST00000539416 TRIM44Q96DX7 344 aaPredicted RBP15.09■□□□□ 0.01
NEK6-212ENST00000539416 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
NEK6-212ENST00000539416 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
NEK6-212ENST00000539416 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
NEK6-212ENST00000539416 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
NEK6-212ENST00000539416 GAS2L3Q86XJ1 694 aa15.09■□□□□ 0.01
NEK6-212ENST00000539416 PRAM1Q96QH2 718 aa15.08■□□□□ 0
NEK6-212ENST00000539416 PANK3Q9H999 370 aa15.08■□□□□ 0
NEK6-212ENST00000539416 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
NEK6-212ENST00000539416 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
NEK6-212ENST00000539416 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
NEK6-212ENST00000539416 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
NEK6-212ENST00000539416 RIPK4P57078 832 aa15.06■□□□□ 0
NEK6-212ENST00000539416 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
NEK6-212ENST00000539416 EVC2Q86UK5 1308 aa15.05■□□□□ 0
NEK6-212ENST00000539416 CHD2O14647 1828 aaKnown RBP15.05■□□□□ -0
NEK6-212ENST00000539416 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
NEK6-212ENST00000539416 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
NEK6-212ENST00000539416 PTCH1Q13635 1447 aa15.05■□□□□ -0
NEK6-212ENST00000539416 AAMPQ13685 434 aa15.04■□□□□ -0
NEK6-212ENST00000539416 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
NEK6-212ENST00000539416 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
NEK6-212ENST00000539416 COG6Q9Y2V7 657 aa15.04■□□□□ -0
NEK6-212ENST00000539416 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
NEK6-212ENST00000539416 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
NEK6-212ENST00000539416 PANK1Q8TE04 598 aa15.03■□□□□ -0
NEK6-212ENST00000539416 CLUAP1Q96AJ1 413 aa15.03■□□□□ -0
NEK6-212ENST00000539416 CCDC146Q8IYE0 955 aa15.02□□□□□ -0.01
NEK6-212ENST00000539416 MYOM1P52179 1685 aa15.02□□□□□ -0.01
NEK6-212ENST00000539416 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
NEK6-212ENST00000539416 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
NEK6-212ENST00000539416 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
NEK6-212ENST00000539416 HSPA2P54652 639 aa15.01□□□□□ -0.01
NEK6-212ENST00000539416 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
NEK6-212ENST00000539416 ADGRB2O60241 1585 aa15□□□□□ -0.01
NEK6-212ENST00000539416 NWD1Q149M9 1564 aa15□□□□□ -0.01
NEK6-212ENST00000539416 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
NEK6-212ENST00000539416 STRCQ7RTU9 1775 aa15□□□□□ -0.01
NEK6-212ENST00000539416 DDX11L8A8MPP1 907 aa15□□□□□ -0.01
NEK6-212ENST00000539416 OFD1O75665 1012 aa15□□□□□ -0.01
NEK6-212ENST00000539416 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.99□□□□□ -0.01
NEK6-212ENST00000539416 KCNA6P17658 529 aa14.99□□□□□ -0.01
NEK6-212ENST00000539416 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
NEK6-212ENST00000539416 FAM13BQ9NYF5 915 aa14.99□□□□□ -0.01
NEK6-212ENST00000539416 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
NEK6-212ENST00000539416 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
NEK6-212ENST00000539416 NKTRP30414 1462 aaKnown RBP14.99□□□□□ -0.01
NEK6-212ENST00000539416 CDK19Q9BWU1 502 aa14.98□□□□□ -0.01
NEK6-212ENST00000539416 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
NEK6-212ENST00000539416 PCDHB15Q9Y5E8 787 aa14.97□□□□□ -0.01
NEK6-212ENST00000539416 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
NEK6-212ENST00000539416 APAF1O14727 1248 aa14.97□□□□□ -0.01
NEK6-212ENST00000539416 ATAD2Q6PL18 1390 aa14.97□□□□□ -0.01
NEK6-212ENST00000539416 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
NEK6-212ENST00000539416 ZSCAN30Q86W11 494 aa14.96□□□□□ -0.01
NEK6-212ENST00000539416 ARID3AQ99856 593 aa14.96□□□□□ -0.01
NEK6-212ENST00000539416 C22orf23Q9BZE7 217 aa14.96□□□□□ -0.01
NEK6-212ENST00000539416 MFAP1P55081 439 aaKnown RBP14.96□□□□□ -0.01
NEK6-212ENST00000539416 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
NEK6-212ENST00000539416 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
NEK6-212ENST00000539416 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
NEK6-212ENST00000539416 TNPO1Q92973 898 aaKnown RBP14.95□□□□□ -0.02
NEK6-212ENST00000539416 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
NEK6-212ENST00000539416 PPP1R9BQ96SB3 815 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms